RNA–Protein interactions for RNA: ENST00000414723.1

GCA-202, Transcript of grancalcin, humanhuman

TSL 3

Gene GCA, Length 655 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-202ENST00000414723 POTEDQ86YR6 584 aa16.92■□□□□ 0.3
GCA-202ENST00000414723 AEBP2Q6ZN18 517 aaPredicted RBP14.87□□□□□ -0.03
GCA-202ENST00000414723 CHIC1Q5VXU3 224 aa14.26□□□□□ -0.13
GCA-202ENST00000414723 SENP3Q9H4L4 574 aaPredicted RBP13.21□□□□□ -0.29
GCA-202ENST00000414723 MSH5O43196 834 aa12.86□□□□□ -0.35
GCA-202ENST00000414723 POTEHQ6S545 545 aa12.75□□□□□ -0.37
GCA-202ENST00000414723 PHF23Q9BUL5 403 aaPredicted RBP12.59□□□□□ -0.39
GCA-202ENST00000414723 FOXD1Q16676 465 aa12.55□□□□□ -0.4
GCA-202ENST00000414723 CACNB1Q02641 598 aaPredicted RBP12.54□□□□□ -0.4
GCA-202ENST00000414723 PLPPR3Q6T4P5 718 aa11.68□□□□□ -0.54
GCA-202ENST00000414723 PLSCR2Q9NRY7 297 aa11.56□□□□□ -0.56
GCA-202ENST00000414723 PIAS4Q8N2W9 510 aaPredicted RBP11.08□□□□□ -0.64
GCA-202ENST00000414723 ADRA2BP18089 450 aa11.02□□□□□ -0.65
GCA-202ENST00000414723 PPP6R1Q9UPN7 881 aa10.98□□□□□ -0.65
GCA-202ENST00000414723 SP7Q8TDD2 431 aaPredicted RBP10.74□□□□□ -0.69
GCA-202ENST00000414723 RNF39Q9H2S5 420 aa10.68□□□□□ -0.7
GCA-202ENST00000414723 C1QBPQ07021 282 aaKnown RBP10.43□□□□□ -0.74
GCA-202ENST00000414723 PPP4R3CPQ6ZMV5 832 aa10.28□□□□□ -0.76
GCA-202ENST00000414723 SCAF1Q9H7N4 1312 aaKnown RBP10.18□□□□□ -0.78
GCA-202ENST00000414723 KCNA4P22459 653 aa10.16□□□□□ -0.78
GCA-202ENST00000414723 NCBP3Q53F19 620 aaKnown RBP10.12□□□□□ -0.79
GCA-202ENST00000414723 DMRT2Q9Y5R5 561 aa10.05□□□□□ -0.8
GCA-202ENST00000414723 LHX8Q68G74 356 aa10.01□□□□□ -0.81
GCA-202ENST00000414723 CNKSR2Q8WXI2 1034 aa9.99□□□□□ -0.81
GCA-202ENST00000414723 MAPK8IP2Q13387 824 aaPredicted RBP9.93□□□□□ -0.82
GCA-202ENST00000414723 NPM3O75607 178 aaKnown RBP9.88□□□□□ -0.83
GCA-202ENST00000414723 SLC4A1APQ9BWU0 796 aaKnown RBP9.75□□□□□ -0.85
GCA-202ENST00000414723 RNF216Q9NWF9 866 aaPredicted RBP9.75□□□□□ -0.85
GCA-202ENST00000414723 PCDH10Q9P2E7 1040 aa9.68□□□□□ -0.86
GCA-202ENST00000414723 HOXD11P31277 338 aaPredicted RBP9.65□□□□□ -0.86
GCA-202ENST00000414723 DCAF8L1A6NGE4 600 aa9.64□□□□□ -0.87
GCA-202ENST00000414723 EHMT2Q96KQ7 1210 aa9.62□□□□□ -0.87
GCA-202ENST00000414723 CHRDL2Q6WN34 429 aa9.61□□□□□ -0.87
GCA-202ENST00000414723 POTEMA6NI47 508 aa9.58□□□□□ -0.88
GCA-202ENST00000414723 DNAJC5BQ9UF47 199 aa9.56□□□□□ -0.88
GCA-202ENST00000414723 POTEGQ6S5H5 508 aa9.43□□□□□ -0.9
GCA-202ENST00000414723 CSRNP3Q8WYN3 585 aa9.38□□□□□ -0.91
GCA-202ENST00000414723 FOXD4L1Q9NU39 408 aa9.37□□□□□ -0.91
GCA-202ENST00000414723 HAX1O00165 279 aa9.32□□□□□ -0.92
GCA-202ENST00000414723 ZBTB22O15209 634 aa9.31□□□□□ -0.92
GCA-202ENST00000414723 SLC4A2P04920 1241 aa9.27□□□□□ -0.93
GCA-202ENST00000414723 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.27□□□□□ -0.939e-8■■□□□ 14
GCA-202ENST00000414723 MYCNP04198 464 aaPredicted RBP9.18□□□□□ -0.94
GCA-202ENST00000414723 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.1□□□□□ -0.95
GCA-202ENST00000414723 DSG3P32926 999 aa9.1□□□□□ -0.95
GCA-202ENST00000414723 HNRNPUL2Q1KMD3 747 aaKnown RBP9.1□□□□□ -0.95
GCA-202ENST00000414723 U3KPZ7 1027 aaPredicted RBP9.06□□□□□ -0.96
GCA-202ENST00000414723 SAMD1Q6SPF0 538 aaPredicted RBP9.05□□□□□ -0.96
GCA-202ENST00000414723 ATXN8OSP0DMR3 200 aa9.03□□□□□ -0.96
GCA-202ENST00000414723 APLP2Q06481 763 aa9□□□□□ -0.97
GCA-202ENST00000414723 EVX2Q03828 476 aa8.97□□□□□ -0.97
GCA-202ENST00000414723 RBM42Q9BTD8 480 aaKnown RBP8.84□□□□□ -0.99
GCA-202ENST00000414723 ATF5Q9Y2D1 282 aaPredicted RBP8.83□□□□□ -1
GCA-202ENST00000414723 ZNF219Q9P2Y4 722 aaPredicted RBP8.81□□□□□ -1
GCA-202ENST00000414723 CAPN15O75808 1086 aa8.8□□□□□ -1
GCA-202ENST00000414723 PIP4P2Q8N4L2 257 aa8.78□□□□□ -1
GCA-202ENST00000414723 TRHP20396 242 aaPredicted RBP8.77□□□□□ -1.01
GCA-202ENST00000414723 SPINK5Q9NQ38 1064 aaPredicted RBP8.77□□□□□ -1.01
GCA-202ENST00000414723 GABBR2O75899 941 aa8.68□□□□□ -1.02
GCA-202ENST00000414723 OTUD5Q96G74 571 aa8.64□□□□□ -1.03
GCA-202ENST00000414723 POLA2Q14181 598 aa8.63□□□□□ -1.03
GCA-202ENST00000414723 ABCB7O75027 752 aa8.6□□□□□ -1.03
GCA-202ENST00000414723 FBLN2P98095 1184 aa8.59□□□□□ -1.03
GCA-202ENST00000414723 ZBTB12Q9Y330 459 aaPredicted RBP8.57□□□□□ -1.04
GCA-202ENST00000414723 MMRN1Q13201 1228 aa8.56□□□□□ -1.04
GCA-202ENST00000414723 FKBP8Q14318 412 aa8.54□□□□□ -1.04
GCA-202ENST00000414723 CDAN1Q8IWY9 1227 aa8.47□□□□□ -1.05
GCA-202ENST00000414723 POTEIP0CG38 1075 aa8.46□□□□□ -1.06
GCA-202ENST00000414723 MKRN4PQ13434 485 aaPredicted RBP8.46□□□□□ -1.06
GCA-202ENST00000414723 LCE2DQ5TA82 110 aaPredicted RBP8.43□□□□□ -1.06
GCA-202ENST00000414723 SPDYE4A6NLX3 237 aa8.41□□□□□ -1.06
GCA-202ENST00000414723 FXR2P51116 673 aaKnown RBP eCLIP8.35□□□□□ -1.07
GCA-202ENST00000414723 OSCARQ8IYS5 282 aa8.34□□□□□ -1.07
GCA-202ENST00000414723 SPDYE2BA6NHP3 402 aa8.32□□□□□ -1.08
GCA-202ENST00000414723 SPDYE6P0CI01 402 aa8.32□□□□□ -1.08
GCA-202ENST00000414723 SPDYE2Q495Y8 402 aa8.32□□□□□ -1.08
GCA-202ENST00000414723 ZNF692Q9BU19 519 aaPredicted RBP8.3□□□□□ -1.08
GCA-202ENST00000414723 SPNS2Q8IVW8 549 aa8.28□□□□□ -1.08
GCA-202ENST00000414723 FBXO3Q9UK99 471 aa8.25□□□□□ -1.09
GCA-202ENST00000414723 PROM2Q8N271 834 aa8.23□□□□□ -1.09
GCA-202ENST00000414723 SSUH2Q9Y2M2 353 aa8.22□□□□□ -1.09
GCA-202ENST00000414723 C19orf67A6NJJ6 358 aa8.18□□□□□ -1.1
GCA-202ENST00000414723 PABPN1Q86U42 306 aaKnown RBP eCLIP8.18□□□□□ -1.1
GCA-202ENST00000414723 FAM163AQ96GL9 167 aaPredicted RBP8.16□□□□□ -1.1
GCA-202ENST00000414723 AKT1S1Q96B36 256 aa8.13□□□□□ -1.11
GCA-202ENST00000414723 STAG3Q9UJ98 1225 aa8.12□□□□□ -1.11
GCA-202ENST00000414723 POTEB2H3BUK9 544 aa8.09□□□□□ -1.11
GCA-202ENST00000414723 VASPP50552 380 aaPredicted RBP8.09□□□□□ -1.11
GCA-202ENST00000414723 SPDYE1Q8NFV5 336 aaPredicted RBP8.05□□□□□ -1.12
GCA-202ENST00000414723 AMER1Q5JTC6 1135 aaPredicted RBP8.04□□□□□ -1.12
GCA-202ENST00000414723 PLEKHG5O94827 1062 aa8.02□□□□□ -1.13
GCA-202ENST00000414723 REM2Q8IYK8 340 aaPredicted RBP8.02□□□□□ -1.13
GCA-202ENST00000414723 PLCD3Q8N3E9 789 aa8.02□□□□□ -1.13
GCA-202ENST00000414723 CLEC11AQ9Y240 323 aa8.01□□□□□ -1.13
GCA-202ENST00000414723 LOC100996750A0A140TA64 210 aa7.99□□□□□ -1.13
GCA-202ENST00000414723 KRTAP4-6Q9BYQ5 205 aa7.99□□□□□ -1.13
GCA-202ENST00000414723 MIER1Q8N108 512 aa7.98□□□□□ -1.13
GCA-202ENST00000414723 KLHL34Q8N239 644 aa7.97□□□□□ -1.13
GCA-202ENST00000414723 PRR29P0C7W0 189 aa7.96□□□□□ -1.14
GCA-202ENST00000414723 IFNLR1Q8IU57 520 aaPredicted RBP7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms