RNA–Protein interactions for RNA: ENST00000414230.2

PRELID3BP11-201, Transcript of PRELI domain containing 3B pseudogene 11, humanhuman

BASIC

Gene PRELID3BP11, Length 479 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRELID3BP11-201ENST00000414230 AEBP2Q6ZN18 517 aaPredicted RBP17.19■□□□□ 0.34
PRELID3BP11-201ENST00000414230 CHIC1Q5VXU3 224 aa17.04■□□□□ 0.32
PRELID3BP11-201ENST00000414230 PHF23Q9BUL5 403 aaPredicted RBP14.94□□□□□ -0.02
PRELID3BP11-201ENST00000414230 SENP3Q9H4L4 574 aaPredicted RBP14.69□□□□□ -0.06
PRELID3BP11-201ENST00000414230 PLPPR3Q6T4P5 718 aa13.96□□□□□ -0.17
PRELID3BP11-201ENST00000414230 FOXD1Q16676 465 aa13.55□□□□□ -0.24
PRELID3BP11-201ENST00000414230 ADRA2BP18089 450 aa13.11□□□□□ -0.31
PRELID3BP11-201ENST00000414230 PPP6R1Q9UPN7 881 aa13.1□□□□□ -0.31
PRELID3BP11-201ENST00000414230 PIAS4Q8N2W9 510 aaPredicted RBP12.82□□□□□ -0.36
PRELID3BP11-201ENST00000414230 MSH5O43196 834 aa12.78□□□□□ -0.36
PRELID3BP11-201ENST00000414230 POTEDQ86YR6 584 aa12.58□□□□□ -0.4
PRELID3BP11-201ENST00000414230 PPP4R3CPQ6ZMV5 832 aa12.26□□□□□ -0.45
PRELID3BP11-201ENST00000414230 SCAF1Q9H7N4 1312 aaKnown RBP12.16□□□□□ -0.46
PRELID3BP11-201ENST00000414230 KCNA4P22459 653 aa12.14□□□□□ -0.47
PRELID3BP11-201ENST00000414230 NCBP3Q53F19 620 aaKnown RBP12.09□□□□□ -0.47
PRELID3BP11-201ENST00000414230 CNKSR2Q8WXI2 1034 aa11.94□□□□□ -0.5
PRELID3BP11-201ENST00000414230 MAPK8IP2Q13387 824 aaPredicted RBP11.82□□□□□ -0.52
PRELID3BP11-201ENST00000414230 NPM3O75607 178 aaKnown RBP11.81□□□□□ -0.52
PRELID3BP11-201ENST00000414230 DMRT2Q9Y5R5 561 aa11.72□□□□□ -0.53
PRELID3BP11-201ENST00000414230 RNF216Q9NWF9 866 aaPredicted RBP11.67□□□□□ -0.54
PRELID3BP11-201ENST00000414230 SLC4A1APQ9BWU0 796 aaKnown RBP11.64□□□□□ -0.55
PRELID3BP11-201ENST00000414230 DNAJC5BQ9UF47 199 aa11.58□□□□□ -0.56
PRELID3BP11-201ENST00000414230 HOXD11P31277 338 aaPredicted RBP11.56□□□□□ -0.56
PRELID3BP11-201ENST00000414230 EHMT2Q96KQ7 1210 aa11.5□□□□□ -0.57
PRELID3BP11-201ENST00000414230 CSRNP3Q8WYN3 585 aa11.25□□□□□ -0.61
PRELID3BP11-201ENST00000414230 FOXD4L1Q9NU39 408 aa11.19□□□□□ -0.62
PRELID3BP11-201ENST00000414230 DCAF8L1A6NGE4 600 aa11.15□□□□□ -0.62
PRELID3BP11-201ENST00000414230 ZBTB22O15209 634 aa11.14□□□□□ -0.63
PRELID3BP11-201ENST00000414230 SLC4A2P04920 1241 aa11.09□□□□□ -0.63
PRELID3BP11-201ENST00000414230 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.01□□□□□ -0.65
PRELID3BP11-201ENST00000414230 CACNB1Q02641 598 aaPredicted RBP10.98□□□□□ -0.65
PRELID3BP11-201ENST00000414230 MYCNP04198 464 aaPredicted RBP10.97□□□□□ -0.65
PRELID3BP11-201ENST00000414230 RNF39Q9H2S5 420 aa10.88□□□□□ -0.67
PRELID3BP11-201ENST00000414230 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.87□□□□□ -0.67
PRELID3BP11-201ENST00000414230 HNRNPUL2Q1KMD3 747 aaKnown RBP10.87□□□□□ -0.67
PRELID3BP11-201ENST00000414230 ATXN8OSP0DMR3 200 aa10.86□□□□□ -0.67
PRELID3BP11-201ENST00000414230 SAMD1Q6SPF0 538 aaPredicted RBP10.81□□□□□ -0.68
PRELID3BP11-201ENST00000414230 U3KPZ7 1027 aaPredicted RBP10.81□□□□□ -0.68
PRELID3BP11-201ENST00000414230 C1QBPQ07021 282 aaKnown RBP10.76□□□□□ -0.69
PRELID3BP11-201ENST00000414230 APLP2Q06481 763 aa10.74□□□□□ -0.69
PRELID3BP11-201ENST00000414230 ATF5Q9Y2D1 282 aaPredicted RBP10.54□□□□□ -0.72
PRELID3BP11-201ENST00000414230 ZNF219Q9P2Y4 722 aaPredicted RBP10.5□□□□□ -0.73
PRELID3BP11-201ENST00000414230 SLC24A1O60721 1099 aa10.46□□□□□ -0.73
PRELID3BP11-201ENST00000414230 CAPN15O75808 1086 aa10.42□□□□□ -0.74
PRELID3BP11-201ENST00000414230 SPINK5Q9NQ38 1064 aaPredicted RBP10.42□□□□□ -0.74
PRELID3BP11-201ENST00000414230 AMER1Q5JTC6 1135 aaPredicted RBP10.4□□□□□ -0.74
PRELID3BP11-201ENST00000414230 TRHP20396 242 aaPredicted RBP10.38□□□□□ -0.75
PRELID3BP11-201ENST00000414230 POLA2Q14181 598 aa10.28□□□□□ -0.76
PRELID3BP11-201ENST00000414230 RTN4Q9NQC3 1192 aaKnown RBP10.26□□□□□ -0.77
PRELID3BP11-201ENST00000414230 ZBTB12Q9Y330 459 aaPredicted RBP10.25□□□□□ -0.77
PRELID3BP11-201ENST00000414230 FBLN2P98095 1184 aa10.22□□□□□ -0.77
PRELID3BP11-201ENST00000414230 DSG3P32926 999 aa10.21□□□□□ -0.77
PRELID3BP11-201ENST00000414230 ABCB7O75027 752 aa10.17□□□□□ -0.78
PRELID3BP11-201ENST00000414230 FKBP8Q14318 412 aa10.17□□□□□ -0.78
PRELID3BP11-201ENST00000414230 MKRN4PQ13434 485 aaPredicted RBP10.12□□□□□ -0.79
PRELID3BP11-201ENST00000414230 SPDYE4A6NLX3 237 aa10.04□□□□□ -0.8
PRELID3BP11-201ENST00000414230 SPDYE2BA6NHP3 402 aa9.94□□□□□ -0.82
PRELID3BP11-201ENST00000414230 SPDYE6P0CI01 402 aa9.94□□□□□ -0.82
PRELID3BP11-201ENST00000414230 SPDYE2Q495Y8 402 aa9.94□□□□□ -0.82
PRELID3BP11-201ENST00000414230 PROM2Q8N271 834 aa9.93□□□□□ -0.82
PRELID3BP11-201ENST00000414230 OSCARQ8IYS5 282 aa9.9□□□□□ -0.82
PRELID3BP11-201ENST00000414230 FBXO3Q9UK99 471 aa9.89□□□□□ -0.83
PRELID3BP11-201ENST00000414230 ZNF692Q9BU19 519 aaPredicted RBP9.88□□□□□ -0.83
PRELID3BP11-201ENST00000414230 POTEHQ6S545 545 aa9.85□□□□□ -0.83
PRELID3BP11-201ENST00000414230 SSUH2Q9Y2M2 353 aa9.84□□□□□ -0.83
PRELID3BP11-201ENST00000414230 RBM42Q9BTD8 480 aaKnown RBP9.81□□□□□ -0.84
PRELID3BP11-201ENST00000414230 PABPN1Q86U42 306 aaKnown RBP eCLIP9.73□□□□□ -0.85
PRELID3BP11-201ENST00000414230 STAG3Q9UJ98 1225 aa9.71□□□□□ -0.86
PRELID3BP11-201ENST00000414230 AKT1S1Q96B36 256 aa9.7□□□□□ -0.86
PRELID3BP11-201ENST00000414230 VASPP50552 380 aaPredicted RBP9.67□□□□□ -0.86
PRELID3BP11-201ENST00000414230 SPDYE1Q8NFV5 336 aaPredicted RBP9.59□□□□□ -0.87
PRELID3BP11-201ENST00000414230 REM2Q8IYK8 340 aaPredicted RBP9.56□□□□□ -0.88
PRELID3BP11-201ENST00000414230 PLEKHG5O94827 1062 aa9.54□□□□□ -0.88
PRELID3BP11-201ENST00000414230 PLCD3Q8N3E9 789 aa9.52□□□□□ -0.89
PRELID3BP11-201ENST00000414230 PLCB2Q00722 1185 aa9.51□□□□□ -0.89
PRELID3BP11-201ENST00000414230 IFNLR1Q8IU57 520 aaPredicted RBP9.51□□□□□ -0.89
PRELID3BP11-201ENST00000414230 CHRDL2Q6WN34 429 aa9.5□□□□□ -0.89
PRELID3BP11-201ENST00000414230 MIER1Q8N108 512 aa9.5□□□□□ -0.89
PRELID3BP11-201ENST00000414230 ZBTB47Q9UFB7 747 aaPredicted RBP9.5□□□□□ -0.89
PRELID3BP11-201ENST00000414230 CLEC11AQ9Y240 323 aa9.47□□□□□ -0.89
PRELID3BP11-201ENST00000414230 PRR29P0C7W0 189 aa9.46□□□□□ -0.9
PRELID3BP11-201ENST00000414230 KLHL34Q8N239 644 aa9.46□□□□□ -0.9
PRELID3BP11-201ENST00000414230 PITPNM1O00562 1244 aa9.42□□□□□ -0.9
PRELID3BP11-201ENST00000414230 SPOCK2Q92563 424 aa9.42□□□□□ -0.9
PRELID3BP11-201ENST00000414230 BCANQ96GW7 911 aa9.37□□□□□ -0.91
PRELID3BP11-201ENST00000414230 HAP1P54257 671 aaPredicted RBP9.34□□□□□ -0.91
PRELID3BP11-201ENST00000414230 CREBZFQ9NS37 354 aa9.33□□□□□ -0.92
PRELID3BP11-201ENST00000414230 VSIG10Q8N0Z9 540 aa9.29□□□□□ -0.92
PRELID3BP11-201ENST00000414230 NPM1P06748 294 aaKnown RBP eCLIP9.28□□□□□ -0.92
PRELID3BP11-201ENST00000414230 DCAF8L2P0C7V8 631 aa9.27□□□□□ -0.93
PRELID3BP11-201ENST00000414230 MNX1P50219 401 aaPredicted RBP9.26□□□□□ -0.93
PRELID3BP11-201ENST00000414230 PKD2Q13563 968 aa9.26□□□□□ -0.93
PRELID3BP11-201ENST00000414230 TRIM41Q8WV44 630 aa9.25□□□□□ -0.93
PRELID3BP11-201ENST00000414230 FXR2P51116 673 aaKnown RBP eCLIP9.24□□□□□ -0.93
PRELID3BP11-201ENST00000414230 GSE1Q14687 1217 aa9.24□□□□□ -0.93
PRELID3BP11-201ENST00000414230 PIP4P2Q8N4L2 257 aa9.23□□□□□ -0.93
PRELID3BP11-201ENST00000414230 NUBP1P53384 320 aa9.22□□□□□ -0.93
PRELID3BP11-201ENST00000414230 FAM212AQ96EL1 285 aa9.2□□□□□ -0.94
PRELID3BP11-201ENST00000414230 CIZ1Q9ULV3 898 aaPredicted RBP9.2□□□□□ -0.94
PRELID3BP11-201ENST00000414230 ECM2O94769 699 aaPredicted RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms