RNA–Protein interactions for RNA: ENST00000413539.6

DYSF-210, Transcript of dysferlin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DYSF, Length 6,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DYSF-210ENST00000413539 DCAF8L2P0C7V8 631 aa25.71■■□□□ 1.71
DYSF-210ENST00000413539 SUPT5HO00267 1087 aaKnown RBP24.48■■□□□ 1.51
DYSF-210ENST00000413539 EHMT2Q96KQ7 1210 aa24.45■■□□□ 1.5
DYSF-210ENST00000413539 PELP1Q8IZL8 1130 aaKnown RBP24.1■■□□□ 1.45
DYSF-210ENST00000413539 SHROOM4Q9ULL8 1493 aa23.91■■□□□ 1.42
DYSF-210ENST00000413539 TTBK1Q5TCY1 1321 aaPredicted RBP23.64■■□□□ 1.37
DYSF-210ENST00000413539 ERICH6Q7L0X2 663 aa23.51■■□□□ 1.35
DYSF-210ENST00000413539 APLP2Q06481 763 aa23.43■■□□□ 1.34
DYSF-210ENST00000413539 FAM9AQ8IZU1 332 aaPredicted RBP23.32■■□□□ 1.32
DYSF-210ENST00000413539 PCGF6Q9BYE7 350 aa23.29■■□□□ 1.32
DYSF-210ENST00000413539 RANGAP1P46060 587 aaPredicted RBP23.13■■□□□ 1.29
DYSF-210ENST00000413539 CENPBP07199 599 aaPredicted RBP23.05■■□□□ 1.28
DYSF-210ENST00000413539 CCER1Q8TC90 406 aaPredicted RBP23.04■■□□□ 1.28
DYSF-210ENST00000413539 YTHDC1Q96MU7 727 aaKnown RBP22.96■■□□□ 1.27
DYSF-210ENST00000413539 ATP1B4Q9UN42 357 aaPredicted RBP22.85■■□□□ 1.25
DYSF-210ENST00000413539 MYT1Q01538 1121 aa22.83■■□□□ 1.25
DYSF-210ENST00000413539 NEFLP07196 543 aa22.68■■□□□ 1.22
DYSF-210ENST00000413539 NISCHQ9Y2I1 1504 aa22.67■■□□□ 1.22
DYSF-210ENST00000413539 ZEB1P37275 1124 aaPredicted RBP22.6■■□□□ 1.21
DYSF-210ENST00000413539 PPARGC1BQ86YN6 1023 aaKnown RBP22.52■■□□□ 1.2
DYSF-210ENST00000413539 TRIM41Q8WV44 630 aa22.41■■□□□ 1.18
DYSF-210ENST00000413539 UBTFP17480 764 aaKnown RBP22.38■■□□□ 1.17
DYSF-210ENST00000413539 DAXXQ9UER7 740 aaPredicted RBP22.27■■□□□ 1.16
DYSF-210ENST00000413539 POLR3GLQ9BT43 218 aa22.24■■□□□ 1.15
DYSF-210ENST00000413539 CNGB1Q14028 1251 aaPredicted RBP22.22■■□□□ 1.15
DYSF-210ENST00000413539 ITGAEP38570 1179 aa22.06■■□□□ 1.12
DYSF-210ENST00000413539 MYT1LQ9UL68 1186 aa21.94■■□□□ 1.1
DYSF-210ENST00000413539 HRCP23327 699 aa21.89■■□□□ 1.1
DYSF-210ENST00000413539 CHIC1Q5VXU3 224 aa21.89■■□□□ 1.09
DYSF-210ENST00000413539 TRIM26Q12899 539 aaPredicted RBP21.85■■□□□ 1.09
DYSF-210ENST00000413539 SLC4A1APQ9BWU0 796 aaKnown RBP21.79■■□□□ 1.08
DYSF-210ENST00000413539 ZNF316A6NFI3 1004 aaPredicted RBP21.78■■□□□ 1.08
DYSF-210ENST00000413539 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.78■■□□□ 1.08
DYSF-210ENST00000413539 HNRNPUL2Q1KMD3 747 aaKnown RBP21.78■■□□□ 1.08
DYSF-210ENST00000413539 RTL5Q5HYW3 569 aaPredicted RBP21.73■■□□□ 1.07
DYSF-210ENST00000413539 CLSPNQ9HAW4 1339 aa21.71■■□□□ 1.07
DYSF-210ENST00000413539 LOC105371045A0A1W2PR82 267 aa21.63■■□□□ 1.05
DYSF-210ENST00000413539 BCANQ96GW7 911 aa21.59■■□□□ 1.05
DYSF-210ENST00000413539 DIEXFQ68CQ4 756 aaKnown RBP21.48■■□□□ 1.03
DYSF-210ENST00000413539 BCL11AQ9H165 835 aa21.41■■□□□ 1.02
DYSF-210ENST00000413539 GTF3C3Q9Y5Q9 886 aa21.3■■□□□ 1
DYSF-210ENST00000413539 NEUROD1Q13562 356 aa21.29■■□□□ 1
DYSF-210ENST00000413539 FAM50AQ14320 339 aaKnown RBP21.26■□□□□ 0.99
DYSF-210ENST00000413539 TRIM52Q96A61 297 aa21.2■□□□□ 0.98
DYSF-210ENST00000413539 CDK11AQ9UQ88 783 aaPredicted RBP21.17■□□□□ 0.98
DYSF-210ENST00000413539 SLC24A1O60721 1099 aa21.16■□□□□ 0.98
DYSF-210ENST00000413539 ZNF326Q5BKZ1 582 aaKnown RBP21.14■□□□□ 0.97
DYSF-210ENST00000413539 ZBTB47Q9UFB7 747 aaPredicted RBP21.09■□□□□ 0.97
DYSF-210ENST00000413539 NPM2Q86SE8 214 aaKnown RBP21.03■□□□□ 0.96
DYSF-210ENST00000413539 CANXP27824 592 aaKnown RBP21.02■□□□□ 0.96
DYSF-210ENST00000413539 ANP32CO43423 234 aa21.02■□□□□ 0.96
DYSF-210ENST00000413539 EIF5BO60841 1220 aaKnown RBP20.98■□□□□ 0.95
DYSF-210ENST00000413539 ANP32AP39687 249 aaKnown RBP20.84■□□□□ 0.93
DYSF-210ENST00000413539 ARXQ96QS3 562 aa20.7■□□□□ 0.9
DYSF-210ENST00000413539 ACIN1Q9UKV3 1341 aaKnown RBP20.7■□□□□ 0.9
DYSF-210ENST00000413539 ARID3CA6NKF2 412 aa20.69■□□□□ 0.9
DYSF-210ENST00000413539 FKBP8Q14318 412 aa20.66■□□□□ 0.9
DYSF-210ENST00000413539 NBR1Q14596 966 aa20.65■□□□□ 0.9
DYSF-210ENST00000413539 NEFMP07197 916 aa20.64■□□□□ 0.9
DYSF-210ENST00000413539 HSP90AA1P07900 732 aaKnown RBP20.63■□□□□ 0.89
DYSF-210ENST00000413539 ANP32BQ92688 251 aaKnown RBP20.62■□□□□ 0.89
DYSF-210ENST00000413539 FBLN2P98095 1184 aa20.58■□□□□ 0.89
DYSF-210ENST00000413539 SALL2Q9Y467 1007 aaPredicted RBP20.57■□□□□ 0.88
DYSF-210ENST00000413539 P3H3Q8IVL6 736 aa20.56■□□□□ 0.88
DYSF-210ENST00000413539 FAM9BQ8IZU0 186 aa20.47■□□□□ 0.87
DYSF-210ENST00000413539 ZNF777Q9ULD5 760 aaPredicted RBP20.45■□□□□ 0.86
DYSF-210ENST00000413539 PLPPR3Q6T4P5 718 aa20.44■□□□□ 0.86
DYSF-210ENST00000413539 HNRNPUQ00839 825 aaKnown RBP eCLIP20.42■□□□□ 0.86
DYSF-210ENST00000413539 PABPN1Q86U42 306 aaKnown RBP eCLIP20.42■□□□□ 0.86
DYSF-210ENST00000413539 GLIPR1L2Q4G1C9 344 aa20.41■□□□□ 0.86
DYSF-210ENST00000413539 UPF2Q9HAU5 1272 aaKnown RBP20.39■□□□□ 0.86
DYSF-210ENST00000413539 IRX6P78412 446 aaPredicted RBP20.35■□□□□ 0.85
DYSF-210ENST00000413539 CHGAP10645 457 aaKnown RBP20.33■□□□□ 0.85
DYSF-210ENST00000413539 DDX10Q13206 875 aaKnown RBP20.32■□□□□ 0.84
DYSF-210ENST00000413539 CCDC136Q96JN2 1154 aa20.27■□□□□ 0.84
DYSF-210ENST00000413539 STAG3Q9UJ98 1225 aa20.19■□□□□ 0.82
DYSF-210ENST00000413539 TONSLQ96HA7 1378 aa20.18■□□□□ 0.82
DYSF-210ENST00000413539 SENP3Q9H4L4 574 aaPredicted RBP20.15■□□□□ 0.82
DYSF-210ENST00000413539 TPRNQ4KMQ1 711 aa20.14■□□□□ 0.81
DYSF-210ENST00000413539 TMC1Q8TDI8 760 aa20.13■□□□□ 0.81
DYSF-210ENST00000413539 HIRIP3Q9BW71 556 aaPredicted RBP20.13■□□□□ 0.81
DYSF-210ENST00000413539 SENP3-EIF4A1A0A087X0R7 540 aa20.12■□□□□ 0.81
DYSF-210ENST00000413539 PLEKHG5O94827 1062 aa20.11■□□□□ 0.81
DYSF-210ENST00000413539 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.11■□□□□ 0.81
DYSF-210ENST00000413539 ESF1Q9H501 851 aaKnown RBP20.09■□□□□ 0.81
DYSF-210ENST00000413539 SCAF1Q9H7N4 1312 aaKnown RBP20.09■□□□□ 0.81
DYSF-210ENST00000413539 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.08■□□□□ 0.81
DYSF-210ENST00000413539 A0A0G2JS52 829 aa20.08■□□□□ 0.8
DYSF-210ENST00000413539 WDR43Q15061 677 aaKnown RBP eCLIP20.08■□□□□ 0.8
DYSF-210ENST00000413539 KDM2AQ9Y2K7 1162 aa20.06■□□□□ 0.8
DYSF-210ENST00000413539 CHIC2Q9UKJ5 165 aa20.05■□□□□ 0.8
DYSF-210ENST00000413539 CDK11BP21127 795 aaKnown RBP20.04■□□□□ 0.8
DYSF-210ENST00000413539 ZBTB7CA1YPR0 619 aa20.02■□□□□ 0.8
DYSF-210ENST00000413539 MRS2Q9HD23 443 aa20.02■□□□□ 0.8
DYSF-210ENST00000413539 ABCC9O60706 1549 aa20.01■□□□□ 0.79
DYSF-210ENST00000413539 RTN4Q9NQC3 1192 aaKnown RBP20.01■□□□□ 0.79
DYSF-210ENST00000413539 NCLP19338 710 aaKnown RBP20■□□□□ 0.79
DYSF-210ENST00000413539 TRIM44Q96DX7 344 aaPredicted RBP20■□□□□ 0.79
DYSF-210ENST00000413539 MIER1Q8N108 512 aa19.98■□□□□ 0.79
DYSF-210ENST00000413539 TULP1O00294 542 aaPredicted RBP19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms