RNA–Protein interactions for RNA: ENST00000411381.1

RNU6-516P-201, Transcript of RNA, U6 small nuclear 516, pseudogene, humanhuman

BASIC

Gene RNU6-516P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-516P-201ENST00000411381 CHIC1Q5VXU3 224 aa14.8□□□□□ -0.04
RNU6-516P-201ENST00000411381 AEBP2Q6ZN18 517 aaPredicted RBP14.78□□□□□ -0.04
RNU6-516P-201ENST00000411381 PHF23Q9BUL5 403 aaPredicted RBP13.06□□□□□ -0.32
RNU6-516P-201ENST00000411381 SENP3Q9H4L4 574 aaPredicted RBP12.47□□□□□ -0.41
RNU6-516P-201ENST00000411381 PLPPR3Q6T4P5 718 aa12.16□□□□□ -0.46
RNU6-516P-201ENST00000411381 FOXD1Q16676 465 aa11.53□□□□□ -0.56
RNU6-516P-201ENST00000411381 PPP6R1Q9UPN7 881 aa11.39□□□□□ -0.59
RNU6-516P-201ENST00000411381 ADRA2BP18089 450 aa11.38□□□□□ -0.59
RNU6-516P-201ENST00000411381 KCNA4P22459 653 aa10.93□□□□□ -0.66
RNU6-516P-201ENST00000411381 PIAS4Q8N2W9 510 aaPredicted RBP10.93□□□□□ -0.66
RNU6-516P-201ENST00000411381 PPP4R3CPQ6ZMV5 832 aa10.77□□□□□ -0.69
RNU6-516P-201ENST00000411381 NCBP3Q53F19 620 aaKnown RBP10.58□□□□□ -0.72
RNU6-516P-201ENST00000411381 EHMT2Q96KQ7 1210 aa10.54□□□□□ -0.72
RNU6-516P-201ENST00000411381 POTEDQ86YR6 584 aa10.49□□□□□ -0.73
RNU6-516P-201ENST00000411381 MSH5O43196 834 aa10.48□□□□□ -0.73
RNU6-516P-201ENST00000411381 SLC4A1APQ9BWU0 796 aaKnown RBP10.46□□□□□ -0.73
RNU6-516P-201ENST00000411381 NPM3O75607 178 aaKnown RBP10.44□□□□□ -0.74
RNU6-516P-201ENST00000411381 SCAF1Q9H7N4 1312 aaKnown RBP10.41□□□□□ -0.74
RNU6-516P-201ENST00000411381 CNKSR2Q8WXI2 1034 aa10.39□□□□□ -0.75
RNU6-516P-201ENST00000411381 CSRNP3Q8WYN3 585 aa10.32□□□□□ -0.76
RNU6-516P-201ENST00000411381 MAPK8IP2Q13387 824 aaPredicted RBP10.22□□□□□ -0.77
RNU6-516P-201ENST00000411381 DNAJC5BQ9UF47 199 aa10.17□□□□□ -0.78
RNU6-516P-201ENST00000411381 RNF216Q9NWF9 866 aaPredicted RBP10.1□□□□□ -0.79
RNU6-516P-201ENST00000411381 ZBTB22O15209 634 aa10.08□□□□□ -0.8
RNU6-516P-201ENST00000411381 DMRT2Q9Y5R5 561 aa10.03□□□□□ -0.8
RNU6-516P-201ENST00000411381 HOXD11P31277 338 aaPredicted RBP9.99□□□□□ -0.81
RNU6-516P-201ENST00000411381 FOXD4L1Q9NU39 408 aa9.96□□□□□ -0.82
RNU6-516P-201ENST00000411381 SLC4A2P04920 1241 aa9.78□□□□□ -0.84
RNU6-516P-201ENST00000411381 MYCNP04198 464 aaPredicted RBP9.63□□□□□ -0.87
RNU6-516P-201ENST00000411381 ATXN8OSP0DMR3 200 aa9.61□□□□□ -0.87
RNU6-516P-201ENST00000411381 DCAF8L1A6NGE4 600 aa9.48□□□□□ -0.89
RNU6-516P-201ENST00000411381 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.45□□□□□ -0.9
RNU6-516P-201ENST00000411381 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.37□□□□□ -0.91
RNU6-516P-201ENST00000411381 HNRNPUL2Q1KMD3 747 aaKnown RBP9.37□□□□□ -0.91
RNU6-516P-201ENST00000411381 U3KPZ7 1027 aaPredicted RBP9.37□□□□□ -0.91
RNU6-516P-201ENST00000411381 SAMD1Q6SPF0 538 aaPredicted RBP9.36□□□□□ -0.91
RNU6-516P-201ENST00000411381 ATF5Q9Y2D1 282 aaPredicted RBP9.35□□□□□ -0.91
RNU6-516P-201ENST00000411381 FKBP8Q14318 412 aa9.27□□□□□ -0.93
RNU6-516P-201ENST00000411381 APLP2Q06481 763 aa9.18□□□□□ -0.94
RNU6-516P-201ENST00000411381 ZNF219Q9P2Y4 722 aaPredicted RBP9.16□□□□□ -0.94
RNU6-516P-201ENST00000411381 AMER1Q5JTC6 1135 aaPredicted RBP9.11□□□□□ -0.95
RNU6-516P-201ENST00000411381 RTN4Q9NQC3 1192 aaKnown RBP9.1□□□□□ -0.95
RNU6-516P-201ENST00000411381 RNF39Q9H2S5 420 aa9.03□□□□□ -0.96
RNU6-516P-201ENST00000411381 MKRN4PQ13434 485 aaPredicted RBP8.98□□□□□ -0.97
RNU6-516P-201ENST00000411381 SPINK5Q9NQ38 1064 aaPredicted RBP8.98□□□□□ -0.97
RNU6-516P-201ENST00000411381 TRHP20396 242 aaPredicted RBP8.95□□□□□ -0.98
RNU6-516P-201ENST00000411381 C1QBPQ07021 282 aaKnown RBP8.94□□□□□ -0.98
RNU6-516P-201ENST00000411381 SPDYE4A6NLX3 237 aa8.92□□□□□ -0.98
RNU6-516P-201ENST00000411381 FBLN2P98095 1184 aa8.91□□□□□ -0.98
RNU6-516P-201ENST00000411381 POLA2Q14181 598 aa8.91□□□□□ -0.98
RNU6-516P-201ENST00000411381 CAPN15O75808 1086 aa8.9□□□□□ -0.98
RNU6-516P-201ENST00000411381 PROM2Q8N271 834 aa8.89□□□□□ -0.99
RNU6-516P-201ENST00000411381 FBXO3Q9UK99 471 aa8.86□□□□□ -0.99
RNU6-516P-201ENST00000411381 SLC24A1O60721 1099 aa8.81□□□□□ -1
RNU6-516P-201ENST00000411381 ZBTB12Q9Y330 459 aaPredicted RBP8.81□□□□□ -1
RNU6-516P-201ENST00000411381 ABCB7O75027 752 aa8.77□□□□□ -1.01
RNU6-516P-201ENST00000411381 VASPP50552 380 aaPredicted RBP8.73□□□□□ -1.01
RNU6-516P-201ENST00000411381 DSG3P32926 999 aa8.71□□□□□ -1.02
RNU6-516P-201ENST00000411381 IFNLR1Q8IU57 520 aaPredicted RBP8.65□□□□□ -1.02
RNU6-516P-201ENST00000411381 SPDYE2BA6NHP3 402 aa8.61□□□□□ -1.03
RNU6-516P-201ENST00000411381 SPDYE6P0CI01 402 aa8.61□□□□□ -1.03
RNU6-516P-201ENST00000411381 SPDYE2Q495Y8 402 aa8.61□□□□□ -1.03
RNU6-516P-201ENST00000411381 ZNF692Q9BU19 519 aaPredicted RBP8.6□□□□□ -1.03
RNU6-516P-201ENST00000411381 SSUH2Q9Y2M2 353 aa8.6□□□□□ -1.03
RNU6-516P-201ENST00000411381 CACNB1Q02641 598 aaPredicted RBP8.58□□□□□ -1.04
RNU6-516P-201ENST00000411381 OSCARQ8IYS5 282 aa8.58□□□□□ -1.04
RNU6-516P-201ENST00000411381 STAG3Q9UJ98 1225 aa8.55□□□□□ -1.04
RNU6-516P-201ENST00000411381 PKD2Q13563 968 aa8.51□□□□□ -1.05
RNU6-516P-201ENST00000411381 PABPN1Q86U42 306 aaKnown RBP eCLIP8.5□□□□□ -1.05
RNU6-516P-201ENST00000411381 SPOCK2Q92563 424 aa8.48□□□□□ -1.05
RNU6-516P-201ENST00000411381 KLHL34Q8N239 644 aa8.46□□□□□ -1.06
RNU6-516P-201ENST00000411381 PLCD3Q8N3E9 789 aa8.43□□□□□ -1.06
RNU6-516P-201ENST00000411381 PLCB2Q00722 1185 aa8.42□□□□□ -1.06
RNU6-516P-201ENST00000411381 MIER1Q8N108 512 aa8.41□□□□□ -1.06
RNU6-516P-201ENST00000411381 DCAF8L2P0C7V8 631 aa8.37□□□□□ -1.07
RNU6-516P-201ENST00000411381 ECM2O94769 699 aaPredicted RBP8.36□□□□□ -1.07
RNU6-516P-201ENST00000411381 ZBTB47Q9UFB7 747 aaPredicted RBP8.33□□□□□ -1.08
RNU6-516P-201ENST00000411381 PLEKHG5O94827 1062 aa8.32□□□□□ -1.08
RNU6-516P-201ENST00000411381 RGL2O15211 777 aa8.28□□□□□ -1.08
RNU6-516P-201ENST00000411381 BBXQ8WY36 941 aaPredicted RBP8.28□□□□□ -1.08
RNU6-516P-201ENST00000411381 RBM42Q9BTD8 480 aaKnown RBP8.28□□□□□ -1.08
RNU6-516P-201ENST00000411381 AKT1S1Q96B36 256 aa8.27□□□□□ -1.09
RNU6-516P-201ENST00000411381 NPM1P06748 294 aaKnown RBP eCLIP8.26□□□□□ -1.09
RNU6-516P-201ENST00000411381 HAP1P54257 671 aaPredicted RBP8.25□□□□□ -1.09
RNU6-516P-201ENST00000411381 SPDYE1Q8NFV5 336 aaPredicted RBP8.25□□□□□ -1.09
RNU6-516P-201ENST00000411381 TRIM41Q8WV44 630 aa8.24□□□□□ -1.09
RNU6-516P-201ENST00000411381 CIZ1Q9ULV3 898 aaPredicted RBP8.24□□□□□ -1.09
RNU6-516P-201ENST00000411381 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.23□□□□□ -1.09
RNU6-516P-201ENST00000411381 NUBP1P53384 320 aa8.2□□□□□ -1.1
RNU6-516P-201ENST00000411381 VSIG10Q8N0Z9 540 aa8.2□□□□□ -1.1
RNU6-516P-201ENST00000411381 GSE1Q14687 1217 aa8.19□□□□□ -1.1
RNU6-516P-201ENST00000411381 REM2Q8IYK8 340 aaPredicted RBP8.18□□□□□ -1.1
RNU6-516P-201ENST00000411381 CREBZFQ9NS37 354 aa8.17□□□□□ -1.1
RNU6-516P-201ENST00000411381 PRR29P0C7W0 189 aa8.16□□□□□ -1.1
RNU6-516P-201ENST00000411381 PAXIP1Q6ZW49 1069 aaPredicted RBP8.16□□□□□ -1.1
RNU6-516P-201ENST00000411381 MNX1P50219 401 aaPredicted RBP8.15□□□□□ -1.1
RNU6-516P-201ENST00000411381 CLEC11AQ9Y240 323 aa8.15□□□□□ -1.1
RNU6-516P-201ENST00000411381 CHGAP10645 457 aaKnown RBP8.13□□□□□ -1.11
RNU6-516P-201ENST00000411381 SPRYD3Q8NCJ5 442 aa8.13□□□□□ -1.11
RNU6-516P-201ENST00000411381 DCAF8Q5TAQ9 597 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 212.4 ms