RNA–Protein interactions for RNA: ENST00000409582.7

DYSF-204, Transcript of dysferlin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DYSF, Length 6,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DYSF-204ENST00000409582 DCAF8L2P0C7V8 631 aa26.09■■□□□ 1.77
DYSF-204ENST00000409582 SUPT5HO00267 1087 aaKnown RBP24.48■■□□□ 1.51
DYSF-204ENST00000409582 EHMT2Q96KQ7 1210 aa24.45■■□□□ 1.5
DYSF-204ENST00000409582 PELP1Q8IZL8 1130 aaKnown RBP24.1■■□□□ 1.45
DYSF-204ENST00000409582 SHROOM4Q9ULL8 1493 aa24.01■■□□□ 1.43
DYSF-204ENST00000409582 NISCHQ9Y2I1 1504 aa23.99■■□□□ 1.43
DYSF-204ENST00000409582 TTBK1Q5TCY1 1321 aaPredicted RBP23.64■■□□□ 1.37
DYSF-204ENST00000409582 ERICH6Q7L0X2 663 aa23.51■■□□□ 1.35
DYSF-204ENST00000409582 APLP2Q06481 763 aa23.43■■□□□ 1.34
DYSF-204ENST00000409582 FAM9AQ8IZU1 332 aaPredicted RBP23.32■■□□□ 1.32
DYSF-204ENST00000409582 PCGF6Q9BYE7 350 aa23.29■■□□□ 1.32
DYSF-204ENST00000409582 RANGAP1P46060 587 aaPredicted RBP23.13■■□□□ 1.29
DYSF-204ENST00000409582 CENPBP07199 599 aaPredicted RBP23.05■■□□□ 1.28
DYSF-204ENST00000409582 CCER1Q8TC90 406 aaPredicted RBP23.04■■□□□ 1.28
DYSF-204ENST00000409582 YTHDC1Q96MU7 727 aaKnown RBP22.96■■□□□ 1.27
DYSF-204ENST00000409582 ATP1B4Q9UN42 357 aaPredicted RBP22.85■■□□□ 1.25
DYSF-204ENST00000409582 MYT1Q01538 1121 aa22.83■■□□□ 1.25
DYSF-204ENST00000409582 NEFLP07196 543 aa22.68■■□□□ 1.22
DYSF-204ENST00000409582 ZEB1P37275 1124 aaPredicted RBP22.6■■□□□ 1.21
DYSF-204ENST00000409582 PPARGC1BQ86YN6 1023 aaKnown RBP22.52■■□□□ 1.2
DYSF-204ENST00000409582 TRIM41Q8WV44 630 aa22.41■■□□□ 1.18
DYSF-204ENST00000409582 UBTFP17480 764 aaKnown RBP22.38■■□□□ 1.17
DYSF-204ENST00000409582 DAXXQ9UER7 740 aaPredicted RBP22.27■■□□□ 1.16
DYSF-204ENST00000409582 POLR3GLQ9BT43 218 aa22.24■■□□□ 1.15
DYSF-204ENST00000409582 CNGB1Q14028 1251 aaPredicted RBP22.22■■□□□ 1.15
DYSF-204ENST00000409582 ITGAEP38570 1179 aa22.06■■□□□ 1.12
DYSF-204ENST00000409582 MYT1LQ9UL68 1186 aa21.95■■□□□ 1.11
DYSF-204ENST00000409582 HRCP23327 699 aa21.89■■□□□ 1.1
DYSF-204ENST00000409582 CHIC1Q5VXU3 224 aa21.89■■□□□ 1.09
DYSF-204ENST00000409582 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.86■■□□□ 1.09
DYSF-204ENST00000409582 HNRNPUL2Q1KMD3 747 aaKnown RBP21.86■■□□□ 1.09
DYSF-204ENST00000409582 TRIM26Q12899 539 aaPredicted RBP21.85■■□□□ 1.09
DYSF-204ENST00000409582 SLC4A1APQ9BWU0 796 aaKnown RBP21.79■■□□□ 1.08
DYSF-204ENST00000409582 ZNF316A6NFI3 1004 aaPredicted RBP21.78■■□□□ 1.08
DYSF-204ENST00000409582 RTL5Q5HYW3 569 aaPredicted RBP21.73■■□□□ 1.07
DYSF-204ENST00000409582 CLSPNQ9HAW4 1339 aa21.71■■□□□ 1.07
DYSF-204ENST00000409582 LOC105371045A0A1W2PR82 267 aa21.63■■□□□ 1.05
DYSF-204ENST00000409582 BCANQ96GW7 911 aa21.59■■□□□ 1.05
DYSF-204ENST00000409582 PABPN1Q86U42 306 aaKnown RBP eCLIP21.55■■□□□ 1.04
DYSF-204ENST00000409582 ABCC9O60706 1549 aa21.48■■□□□ 1.03
DYSF-204ENST00000409582 DIEXFQ68CQ4 756 aaKnown RBP21.48■■□□□ 1.03
DYSF-204ENST00000409582 BCL11AQ9H165 835 aa21.41■■□□□ 1.02
DYSF-204ENST00000409582 GTF3C3Q9Y5Q9 886 aa21.3■■□□□ 1
DYSF-204ENST00000409582 NEUROD1Q13562 356 aa21.29■■□□□ 1
DYSF-204ENST00000409582 FAM50AQ14320 339 aaKnown RBP21.26■□□□□ 0.99
DYSF-204ENST00000409582 TRIM52Q96A61 297 aa21.2■□□□□ 0.98
DYSF-204ENST00000409582 FBLN2P98095 1184 aa21.18■□□□□ 0.98
DYSF-204ENST00000409582 CDK11AQ9UQ88 783 aaPredicted RBP21.17■□□□□ 0.98
DYSF-204ENST00000409582 SLC24A1O60721 1099 aa21.16■□□□□ 0.98
DYSF-204ENST00000409582 ZNF326Q5BKZ1 582 aaKnown RBP21.14■□□□□ 0.97
DYSF-204ENST00000409582 ZBTB47Q9UFB7 747 aaPredicted RBP21.09■□□□□ 0.97
DYSF-204ENST00000409582 NPM2Q86SE8 214 aaKnown RBP21.03■□□□□ 0.96
DYSF-204ENST00000409582 CANXP27824 592 aaKnown RBP21.02■□□□□ 0.96
DYSF-204ENST00000409582 ANP32CO43423 234 aa21.02■□□□□ 0.96
DYSF-204ENST00000409582 EIF5BO60841 1220 aaKnown RBP20.98■□□□□ 0.95
DYSF-204ENST00000409582 ARID3CA6NKF2 412 aa20.91■□□□□ 0.94
DYSF-204ENST00000409582 ANP32AP39687 249 aaKnown RBP20.84■□□□□ 0.93
DYSF-204ENST00000409582 P3H3Q8IVL6 736 aa20.76■□□□□ 0.91
DYSF-204ENST00000409582 PLPPR3Q6T4P5 718 aa20.72■□□□□ 0.91
DYSF-204ENST00000409582 ARXQ96QS3 562 aa20.7■□□□□ 0.9
DYSF-204ENST00000409582 ACIN1Q9UKV3 1341 aaKnown RBP20.7■□□□□ 0.9
DYSF-204ENST00000409582 FKBP8Q14318 412 aa20.66■□□□□ 0.9
DYSF-204ENST00000409582 NBR1Q14596 966 aa20.65■□□□□ 0.9
DYSF-204ENST00000409582 NEFMP07197 916 aa20.64■□□□□ 0.9
DYSF-204ENST00000409582 HSP90AA1P07900 732 aaKnown RBP20.63■□□□□ 0.89
DYSF-204ENST00000409582 ANP32BQ92688 251 aaKnown RBP20.62■□□□□ 0.89
DYSF-204ENST00000409582 ZNF777Q9ULD5 760 aaPredicted RBP20.58■□□□□ 0.88
DYSF-204ENST00000409582 SALL2Q9Y467 1007 aaPredicted RBP20.57■□□□□ 0.88
DYSF-204ENST00000409582 FAM9BQ8IZU0 186 aa20.47■□□□□ 0.87
DYSF-204ENST00000409582 HNRNPUQ00839 825 aaKnown RBP eCLIP20.42■□□□□ 0.86
DYSF-204ENST00000409582 GLIPR1L2Q4G1C9 344 aa20.41■□□□□ 0.86
DYSF-204ENST00000409582 ESF1Q9H501 851 aaKnown RBP20.4■□□□□ 0.86
DYSF-204ENST00000409582 UPF2Q9HAU5 1272 aaKnown RBP20.39■□□□□ 0.86
DYSF-204ENST00000409582 SCRIBQ14160 1630 aa20.38■□□□□ 0.85
DYSF-204ENST00000409582 IRX6P78412 446 aaPredicted RBP20.35■□□□□ 0.85
DYSF-204ENST00000409582 CHGAP10645 457 aaKnown RBP20.33■□□□□ 0.85
DYSF-204ENST00000409582 DDX10Q13206 875 aaKnown RBP20.32■□□□□ 0.84
DYSF-204ENST00000409582 STAG3Q9UJ98 1225 aa20.29■□□□□ 0.84
DYSF-204ENST00000409582 CCDC136Q96JN2 1154 aa20.27■□□□□ 0.84
DYSF-204ENST00000409582 NPM1P06748 294 aaKnown RBP eCLIP20.27■□□□□ 0.84
DYSF-204ENST00000409582 CSRNP3Q8WYN3 585 aa20.19■□□□□ 0.82
DYSF-204ENST00000409582 TONSLQ96HA7 1378 aa20.18■□□□□ 0.82
DYSF-204ENST00000409582 SENP3Q9H4L4 574 aaPredicted RBP20.16■□□□□ 0.82
DYSF-204ENST00000409582 TPRNQ4KMQ1 711 aa20.14■□□□□ 0.81
DYSF-204ENST00000409582 TMC1Q8TDI8 760 aa20.13■□□□□ 0.81
DYSF-204ENST00000409582 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.13■□□□□ 0.81
DYSF-204ENST00000409582 HIRIP3Q9BW71 556 aaPredicted RBP20.13■□□□□ 0.81
DYSF-204ENST00000409582 SENP3-EIF4A1A0A087X0R7 540 aa20.12■□□□□ 0.81
DYSF-204ENST00000409582 PLEKHG5O94827 1062 aa20.11■□□□□ 0.81
DYSF-204ENST00000409582 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.11■□□□□ 0.81
DYSF-204ENST00000409582 SCAF1Q9H7N4 1312 aaKnown RBP20.09■□□□□ 0.81
DYSF-204ENST00000409582 A0A0G2JS52 829 aa20.08■□□□□ 0.8
DYSF-204ENST00000409582 WDR43Q15061 677 aaKnown RBP eCLIP20.08■□□□□ 0.8
DYSF-204ENST00000409582 KDM2AQ9Y2K7 1162 aa20.06■□□□□ 0.8
DYSF-204ENST00000409582 CHIC2Q9UKJ5 165 aa20.05■□□□□ 0.8
DYSF-204ENST00000409582 CDK11BP21127 795 aaKnown RBP20.04■□□□□ 0.8
DYSF-204ENST00000409582 CHMP7Q8WUX9 453 aaPredicted RBP20.03■□□□□ 0.8
DYSF-204ENST00000409582 ZBTB7CA1YPR0 619 aa20.02■□□□□ 0.8
DYSF-204ENST00000409582 MRS2Q9HD23 443 aa20.02■□□□□ 0.8
DYSF-204ENST00000409582 RTN4Q9NQC3 1192 aaKnown RBP20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 240.6 ms