RNA–Protein interactions for RNA: ENST00000409168.7

SHISA6-202, Transcript of shisa family member 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHISA6, Length 7,262 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA6-202ENST00000409168 DCAF8L2P0C7V8 631 aa28.12■■■□□ 2.09
SHISA6-202ENST00000409168 EHMT2Q96KQ7 1210 aa27.04■■□□□ 1.92
SHISA6-202ENST00000409168 PELP1Q8IZL8 1130 aaKnown RBP26.19■■□□□ 1.78
SHISA6-202ENST00000409168 TTBK1Q5TCY1 1321 aaPredicted RBP26.01■■□□□ 1.75
SHISA6-202ENST00000409168 SUPT5HO00267 1087 aaKnown RBP26■■□□□ 1.75
SHISA6-202ENST00000409168 ERICH6Q7L0X2 663 aa25.98■■□□□ 1.75
SHISA6-202ENST00000409168 MYT1Q01538 1121 aa25.92■■□□□ 1.74
SHISA6-202ENST00000409168 RANGAP1P46060 587 aaPredicted RBP25.49■■□□□ 1.67
SHISA6-202ENST00000409168 APLP2Q06481 763 aa25.34■■□□□ 1.65
SHISA6-202ENST00000409168 ATP1B4Q9UN42 357 aaPredicted RBP25.22■■□□□ 1.63
SHISA6-202ENST00000409168 SHROOM4Q9ULL8 1493 aa25.19■■□□□ 1.62
SHISA6-202ENST00000409168 FAM9AQ8IZU1 332 aaPredicted RBP25.11■■□□□ 1.61
SHISA6-202ENST00000409168 CCER1Q8TC90 406 aaPredicted RBP25.1■■□□□ 1.61
SHISA6-202ENST00000409168 PCGF6Q9BYE7 350 aa25.02■■□□□ 1.6
SHISA6-202ENST00000409168 YTHDC1Q96MU7 727 aaKnown RBP25■■□□□ 1.59
SHISA6-202ENST00000409168 CHIC1Q5VXU3 224 aa24.86■■□□□ 1.57
SHISA6-202ENST00000409168 CNGB1Q14028 1251 aaPredicted RBP24.83■■□□□ 1.57
SHISA6-202ENST00000409168 POLR3GLQ9BT43 218 aa24.66■■□□□ 1.54
SHISA6-202ENST00000409168 MYT1LQ9UL68 1186 aa24.58■■□□□ 1.53
SHISA6-202ENST00000409168 NEFLP07196 543 aa24.58■■□□□ 1.53
SHISA6-202ENST00000409168 DAXXQ9UER7 740 aaPredicted RBP24.57■■□□□ 1.52
SHISA6-202ENST00000409168 CENPBP07199 599 aaPredicted RBP24.5■■□□□ 1.51
SHISA6-202ENST00000409168 SLC4A1APQ9BWU0 796 aaKnown RBP24.4■■□□□ 1.5
SHISA6-202ENST00000409168 PPARGC1BQ86YN6 1023 aaKnown RBP24.26■■□□□ 1.47
SHISA6-202ENST00000409168 BCL11AQ9H165 835 aa24.26■■□□□ 1.47
SHISA6-202ENST00000409168 CLSPNQ9HAW4 1339 aa23.99■■□□□ 1.43
SHISA6-202ENST00000409168 ITGAEP38570 1179 aa23.99■■□□□ 1.43
SHISA6-202ENST00000409168 ZNF316A6NFI3 1004 aaPredicted RBP23.94■■□□□ 1.42
SHISA6-202ENST00000409168 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.93■■□□□ 1.42
SHISA6-202ENST00000409168 HNRNPUL2Q1KMD3 747 aaKnown RBP23.93■■□□□ 1.42
SHISA6-202ENST00000409168 SLC24A1O60721 1099 aa23.93■■□□□ 1.42
SHISA6-202ENST00000409168 UBTFP17480 764 aaKnown RBP23.89■■□□□ 1.41
SHISA6-202ENST00000409168 RTL5Q5HYW3 569 aaPredicted RBP23.63■■□□□ 1.37
SHISA6-202ENST00000409168 TRIM41Q8WV44 630 aa23.48■■□□□ 1.35
SHISA6-202ENST00000409168 BCANQ96GW7 911 aa23.4■■□□□ 1.34
SHISA6-202ENST00000409168 ZEB1P37275 1124 aaPredicted RBP23.37■■□□□ 1.33
SHISA6-202ENST00000409168 PLPPR3Q6T4P5 718 aa23.29■■□□□ 1.32
SHISA6-202ENST00000409168 ZBTB47Q9UFB7 747 aaPredicted RBP23.27■■□□□ 1.32
SHISA6-202ENST00000409168 EIF5BO60841 1220 aaKnown RBP23.12■■□□□ 1.29
SHISA6-202ENST00000409168 ZNF326Q5BKZ1 582 aaKnown RBP23.08■■□□□ 1.29
SHISA6-202ENST00000409168 CANXP27824 592 aaKnown RBP23.03■■□□□ 1.28
SHISA6-202ENST00000409168 ARXQ96QS3 562 aa22.97■■□□□ 1.27
SHISA6-202ENST00000409168 TULP1O00294 542 aaPredicted RBP22.97■■□□□ 1.27
SHISA6-202ENST00000409168 NPM2Q86SE8 214 aaKnown RBP22.97■■□□□ 1.27
SHISA6-202ENST00000409168 A0A0G2JS52 829 aa22.93■■□□□ 1.26
SHISA6-202ENST00000409168 NEUROD1Q13562 356 aa22.9■■□□□ 1.26
SHISA6-202ENST00000409168 TRIM52Q96A61 297 aa22.88■■□□□ 1.25
SHISA6-202ENST00000409168 NCBP3Q53F19 620 aaKnown RBP22.86■■□□□ 1.25
SHISA6-202ENST00000409168 PLEKHG5O94827 1062 aa22.85■■□□□ 1.25
SHISA6-202ENST00000409168 FAM50AQ14320 339 aaKnown RBP22.78■■□□□ 1.24
SHISA6-202ENST00000409168 HRCP23327 699 aa22.73■■□□□ 1.23
SHISA6-202ENST00000409168 SCAF1Q9H7N4 1312 aaKnown RBP22.71■■□□□ 1.23
SHISA6-202ENST00000409168 HSP90AA1P07900 732 aaKnown RBP22.64■■□□□ 1.21
SHISA6-202ENST00000409168 CDK11AQ9UQ88 783 aaPredicted RBP22.61■■□□□ 1.21
SHISA6-202ENST00000409168 SENP3Q9H4L4 574 aaPredicted RBP22.6■■□□□ 1.21
SHISA6-202ENST00000409168 NEFMP07197 916 aa22.57■■□□□ 1.2
SHISA6-202ENST00000409168 ARID3CA6NKF2 412 aa22.57■■□□□ 1.2
SHISA6-202ENST00000409168 CDK11BP21127 795 aaKnown RBP22.56■■□□□ 1.2
SHISA6-202ENST00000409168 TPRNQ4KMQ1 711 aa22.53■■□□□ 1.2
SHISA6-202ENST00000409168 ANP32BQ92688 251 aaKnown RBP22.51■■□□□ 1.19
SHISA6-202ENST00000409168 FBLN2P98095 1184 aa22.49■■□□□ 1.19
SHISA6-202ENST00000409168 TAOK2Q9UL54 1235 aa22.47■■□□□ 1.19
SHISA6-202ENST00000409168 DIEXFQ68CQ4 756 aaKnown RBP22.46■■□□□ 1.19
SHISA6-202ENST00000409168 ZBTB7CA1YPR0 619 aa22.46■■□□□ 1.19
SHISA6-202ENST00000409168 SALL2Q9Y467 1007 aaPredicted RBP22.46■■□□□ 1.19
SHISA6-202ENST00000409168 LOC105371045A0A1W2PR82 267 aa22.45■■□□□ 1.18
SHISA6-202ENST00000409168 TRIM26Q12899 539 aaPredicted RBP22.44■■□□□ 1.18
SHISA6-202ENST00000409168 NBR1Q14596 966 aa22.36■■□□□ 1.17
SHISA6-202ENST00000409168 AMER1Q5JTC6 1135 aaPredicted RBP22.35■■□□□ 1.17
SHISA6-202ENST00000409168 GTF3C3Q9Y5Q9 886 aa22.35■■□□□ 1.17
SHISA6-202ENST00000409168 ANP32AP39687 249 aaKnown RBP22.33■■□□□ 1.17
SHISA6-202ENST00000409168 CHGAP10645 457 aaKnown RBP22.33■■□□□ 1.16
SHISA6-202ENST00000409168 ANP32CO43423 234 aa22.3■■□□□ 1.16
SHISA6-202ENST00000409168 STAG3Q9UJ98 1225 aa22.22■■□□□ 1.15
SHISA6-202ENST00000409168 ESF1Q9H501 851 aaKnown RBP22.17■■□□□ 1.14
SHISA6-202ENST00000409168 ZNF777Q9ULD5 760 aaPredicted RBP22.12■■□□□ 1.13
SHISA6-202ENST00000409168 GLIPR1L2Q4G1C9 344 aa22.08■■□□□ 1.13
SHISA6-202ENST00000409168 C14orf37Q86TY3 774 aa22.07■■□□□ 1.12
SHISA6-202ENST00000409168 CLSTN1O94985 981 aa22.03■■□□□ 1.12
SHISA6-202ENST00000409168 UPF2Q9HAU5 1272 aaKnown RBP22■■□□□ 1.11
SHISA6-202ENST00000409168 P3H3Q8IVL6 736 aa21.99■■□□□ 1.11
SHISA6-202ENST00000409168 SENP3-EIF4A1A0A087X0R7 540 aa21.99■■□□□ 1.11
SHISA6-202ENST00000409168 NCLP19338 710 aaKnown RBP21.92■■□□□ 1.1
SHISA6-202ENST00000409168 FAM9BQ8IZU0 186 aa21.92■■□□□ 1.1
SHISA6-202ENST00000409168 PRM3Q9NNZ6 103 aa21.92■■□□□ 1.1
SHISA6-202ENST00000409168 FKBP8Q14318 412 aa21.9■■□□□ 1.1
SHISA6-202ENST00000409168 ANO8Q9HCE9 1232 aaPredicted RBP21.89■■□□□ 1.1
SHISA6-202ENST00000409168 IRX6P78412 446 aaPredicted RBP21.86■■□□□ 1.09
SHISA6-202ENST00000409168 NPHP1O15259 732 aa21.85■■□□□ 1.09
SHISA6-202ENST00000409168 HAP1P54257 671 aaPredicted RBP21.82■■□□□ 1.08
SHISA6-202ENST00000409168 PDE4CQ08493 712 aa21.8■■□□□ 1.08
SHISA6-202ENST00000409168 DNTTIP2Q5QJE6 756 aaKnown RBP21.79■■□□□ 1.08
SHISA6-202ENST00000409168 PLCB2Q00722 1185 aa21.79■■□□□ 1.08
SHISA6-202ENST00000409168 FBXO3Q9UK99 471 aa21.79■■□□□ 1.08
SHISA6-202ENST00000409168 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.76■■□□□ 1.07
SHISA6-202ENST00000409168 RTN4Q9NQC3 1192 aaKnown RBP21.74■■□□□ 1.07
SHISA6-202ENST00000409168 PTMAP06454 111 aaKnown RBP21.73■■□□□ 1.07
SHISA6-202ENST00000409168 NISCHQ9Y2I1 1504 aa21.71■■□□□ 1.07
SHISA6-202ENST00000409168 ZRSR1Q15695 479 aaKnown RBP21.69■■□□□ 1.06
SHISA6-202ENST00000409168 HNRNPUQ00839 825 aaKnown RBP eCLIP21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms