RNA–Protein interactions for RNA: ENST00000407230.5

NCOA1-206, Transcript of nuclear receptor coactivator 1, humanhuman

TSL 1 (best) BASIC

Gene NCOA1, Length 4,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-206ENST00000407230 DCAF8L2P0C7V8 631 aa9.45□□□□□ -0.9
NCOA1-206ENST00000407230 SUPT5HO00267 1087 aaKnown RBP9.02□□□□□ -0.97
NCOA1-206ENST00000407230 NISCHQ9Y2I1 1504 aa8.81□□□□□ -1
NCOA1-206ENST00000407230 SHROOM4Q9ULL8 1493 aa8.81□□□□□ -1
NCOA1-206ENST00000407230 EHMT2Q96KQ7 1210 aa8.76□□□□□ -1.01
NCOA1-206ENST00000407230 PELP1Q8IZL8 1130 aaKnown RBP8.68□□□□□ -1.02
NCOA1-206ENST00000407230 APLP2Q06481 763 aa8.61□□□□□ -1.03
NCOA1-206ENST00000407230 FAM9AQ8IZU1 332 aaPredicted RBP8.53□□□□□ -1.04
NCOA1-206ENST00000407230 TTBK1Q5TCY1 1321 aaPredicted RBP8.49□□□□□ -1.05
NCOA1-206ENST00000407230 PCGF6Q9BYE7 350 aa8.47□□□□□ -1.05
NCOA1-206ENST00000407230 CENPBP07199 599 aaPredicted RBP8.37□□□□□ -1.07
NCOA1-206ENST00000407230 RANGAP1P46060 587 aaPredicted RBP8.37□□□□□ -1.07
NCOA1-206ENST00000407230 ZEB1P37275 1124 aaPredicted RBP8.35□□□□□ -1.07
NCOA1-206ENST00000407230 ERICH6Q7L0X2 663 aa8.34□□□□□ -1.07
NCOA1-206ENST00000407230 CCER1Q8TC90 406 aaPredicted RBP8.34□□□□□ -1.07
NCOA1-206ENST00000407230 TRIM41Q8WV44 630 aa8.33□□□□□ -1.08
NCOA1-206ENST00000407230 ATP1B4Q9UN42 357 aaPredicted RBP8.29□□□□□ -1.08
NCOA1-206ENST00000407230 UBTFP17480 764 aaKnown RBP8.26□□□□□ -1.09
NCOA1-206ENST00000407230 NEFLP07196 543 aa8.21□□□□□ -1.1
NCOA1-206ENST00000407230 YTHDC1Q96MU7 727 aaKnown RBP8.2□□□□□ -1.1
NCOA1-206ENST00000407230 PPARGC1BQ86YN6 1023 aaKnown RBP8.14□□□□□ -1.11
NCOA1-206ENST00000407230 TRIM26Q12899 539 aaPredicted RBP8.08□□□□□ -1.12
NCOA1-206ENST00000407230 MYT1Q01538 1121 aa8.07□□□□□ -1.12
NCOA1-206ENST00000407230 ITGAEP38570 1179 aa8.03□□□□□ -1.12
NCOA1-206ENST00000407230 HRCP23327 699 aa8.02□□□□□ -1.13
NCOA1-206ENST00000407230 POLR3GLQ9BT43 218 aa8□□□□□ -1.13
NCOA1-206ENST00000407230 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.98□□□□□ -1.13
NCOA1-206ENST00000407230 HNRNPUL2Q1KMD3 747 aaKnown RBP7.98□□□□□ -1.13
NCOA1-206ENST00000407230 LOC105371045A0A1W2PR82 267 aa7.97□□□□□ -1.13
NCOA1-206ENST00000407230 MYT1LQ9UL68 1186 aa7.97□□□□□ -1.13
NCOA1-206ENST00000407230 DAXXQ9UER7 740 aaPredicted RBP7.97□□□□□ -1.13
NCOA1-206ENST00000407230 CHIC1Q5VXU3 224 aa7.94□□□□□ -1.14
NCOA1-206ENST00000407230 CNGB1Q14028 1251 aaPredicted RBP7.93□□□□□ -1.14
NCOA1-206ENST00000407230 DIEXFQ68CQ4 756 aaKnown RBP7.84□□□□□ -1.15
NCOA1-206ENST00000407230 SLC4A1APQ9BWU0 796 aaKnown RBP7.83□□□□□ -1.16
NCOA1-206ENST00000407230 FAM50AQ14320 339 aaKnown RBP7.8□□□□□ -1.16
NCOA1-206ENST00000407230 RTL5Q5HYW3 569 aaPredicted RBP7.8□□□□□ -1.16
NCOA1-206ENST00000407230 CLSPNQ9HAW4 1339 aa7.8□□□□□ -1.16
NCOA1-206ENST00000407230 ZNF316A6NFI3 1004 aaPredicted RBP7.79□□□□□ -1.16
NCOA1-206ENST00000407230 TRIM52Q96A61 297 aa7.77□□□□□ -1.16
NCOA1-206ENST00000407230 NEUROD1Q13562 356 aa7.75□□□□□ -1.17
NCOA1-206ENST00000407230 BCANQ96GW7 911 aa7.73□□□□□ -1.17
NCOA1-206ENST00000407230 ANP32CO43423 234 aa7.7□□□□□ -1.18
NCOA1-206ENST00000407230 ZNF326Q5BKZ1 582 aaKnown RBP7.7□□□□□ -1.18
NCOA1-206ENST00000407230 GTF3C3Q9Y5Q9 886 aa7.69□□□□□ -1.18
NCOA1-206ENST00000407230 PABPN1Q86U42 306 aaKnown RBP eCLIP7.69□□□□□ -1.18
NCOA1-206ENST00000407230 CDK11AQ9UQ88 783 aaPredicted RBP7.66□□□□□ -1.18
NCOA1-206ENST00000407230 ZBTB47Q9UFB7 747 aaPredicted RBP7.64□□□□□ -1.19
NCOA1-206ENST00000407230 ABCC9O60706 1549 aa7.63□□□□□ -1.19
NCOA1-206ENST00000407230 FBLN2P98095 1184 aa7.61□□□□□ -1.19
NCOA1-206ENST00000407230 CANXP27824 592 aaKnown RBP7.6□□□□□ -1.19
NCOA1-206ENST00000407230 P3H3Q8IVL6 736 aa7.58□□□□□ -1.2
NCOA1-206ENST00000407230 BCL11AQ9H165 835 aa7.58□□□□□ -1.2
NCOA1-206ENST00000407230 ARID3CA6NKF2 412 aa7.57□□□□□ -1.2
NCOA1-206ENST00000407230 ACIN1Q9UKV3 1341 aaKnown RBP7.57□□□□□ -1.2
NCOA1-206ENST00000407230 SLC24A1O60721 1099 aa7.57□□□□□ -1.2
NCOA1-206ENST00000407230 CSRNP3Q8WYN3 585 aa7.57□□□□□ -1.2
NCOA1-206ENST00000407230 NEFMP07197 916 aa7.56□□□□□ -1.2
NCOA1-206ENST00000407230 ANP32AP39687 249 aaKnown RBP7.54□□□□□ -1.2
NCOA1-206ENST00000407230 ZNF777Q9ULD5 760 aaPredicted RBP7.53□□□□□ -1.2
NCOA1-206ENST00000407230 NPM2Q86SE8 214 aaKnown RBP7.51□□□□□ -1.21
NCOA1-206ENST00000407230 FKBP8Q14318 412 aa7.48□□□□□ -1.21
NCOA1-206ENST00000407230 TONSLQ96HA7 1378 aa7.48□□□□□ -1.21
NCOA1-206ENST00000407230 HNRNPUQ00839 825 aaKnown RBP eCLIP7.46□□□□□ -1.22
NCOA1-206ENST00000407230 DDX10Q13206 875 aaKnown RBP7.44□□□□□ -1.22
NCOA1-206ENST00000407230 CHGAP10645 457 aaKnown RBP7.44□□□□□ -1.22
NCOA1-206ENST00000407230 FAM9BQ8IZU0 186 aa7.44□□□□□ -1.22
NCOA1-206ENST00000407230 HSP90AA1P07900 732 aaKnown RBP7.43□□□□□ -1.22
NCOA1-206ENST00000407230 ESF1Q9H501 851 aaKnown RBP7.42□□□□□ -1.22
NCOA1-206ENST00000407230 ANP32BQ92688 251 aaKnown RBP7.42□□□□□ -1.22
NCOA1-206ENST00000407230 SALL2Q9Y467 1007 aaPredicted RBP7.42□□□□□ -1.22
NCOA1-206ENST00000407230 UPF2Q9HAU5 1272 aaKnown RBP7.41□□□□□ -1.22
NCOA1-206ENST00000407230 STAG3Q9UJ98 1225 aa7.41□□□□□ -1.22
NCOA1-206ENST00000407230 CHIC2Q9UKJ5 165 aa7.39□□□□□ -1.23
NCOA1-206ENST00000407230 DCAF1Q9Y4B6 1507 aa7.39□□□□□ -1.23
NCOA1-206ENST00000407230 EIF5BO60841 1220 aaKnown RBP7.39□□□□□ -1.23
NCOA1-206ENST00000407230 TMC1Q8TDI8 760 aa7.39□□□□□ -1.23
NCOA1-206ENST00000407230 CCDC136Q96JN2 1154 aa7.39□□□□□ -1.23
NCOA1-206ENST00000407230 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.37□□□□□ -1.235e-6■□□□□ 10.5
NCOA1-206ENST00000407230 SCRIBQ14160 1630 aa7.37□□□□□ -1.23
NCOA1-206ENST00000407230 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.36□□□□□ -1.23
NCOA1-206ENST00000407230 MRS2Q9HD23 443 aa7.36□□□□□ -1.23
NCOA1-206ENST00000407230 PLPPR3Q6T4P5 718 aa7.36□□□□□ -1.23
NCOA1-206ENST00000407230 WDR43Q15061 677 aaKnown RBP eCLIP7.36□□□□□ -1.23
NCOA1-206ENST00000407230 NPM1P06748 294 aaKnown RBP eCLIP7.35□□□□□ -1.23
NCOA1-206ENST00000407230 KDM2AQ9Y2K7 1162 aa7.34□□□□□ -1.23
NCOA1-206ENST00000407230 NBR1Q14596 966 aa7.34□□□□□ -1.23
NCOA1-206ENST00000407230 TSPY4P0CV99 314 aa7.33□□□□□ -1.24
NCOA1-206ENST00000407230 TSPY10P0CW01 314 aa7.33□□□□□ -1.24
NCOA1-206ENST00000407230 MIER1Q8N108 512 aa7.33□□□□□ -1.24
NCOA1-206ENST00000407230 MTUS2Q5JR59 1369 aa7.32□□□□□ -1.24
NCOA1-206ENST00000407230 IRX6P78412 446 aaPredicted RBP7.32□□□□□ -1.24
NCOA1-206ENST00000407230 HIRIP3Q9BW71 556 aaPredicted RBP7.32□□□□□ -1.24
NCOA1-206ENST00000407230 ARXQ96QS3 562 aa7.31□□□□□ -1.24
NCOA1-206ENST00000407230 EIF4G2P78344 907 aaKnown RBP eCLIP7.29□□□□□ -1.241e-6■■■□□ 18
NCOA1-206ENST00000407230 CLIP1P30622 1438 aa7.29□□□□□ -1.24
NCOA1-206ENST00000407230 SCAF1Q9H7N4 1312 aaKnown RBP7.28□□□□□ -1.24
NCOA1-206ENST00000407230 MYH16Q9H6N6 1097 aa7.28□□□□□ -1.24
NCOA1-206ENST00000407230 RRP7BPQ9NSQ0 103 aa7.28□□□□□ -1.24
NCOA1-206ENST00000407230 ZCCHC6Q5VYS8 1495 aaKnown RBP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms