RNA–Protein interactions for RNA: ENST00000396840.6

IFFO1-204, Transcript of intermediate filament family orphan 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene IFFO1, Length 2,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-204ENST00000396840 NISCHQ9Y2I1 1504 aa37.5■■■■□ 3.59
IFFO1-204ENST00000396840 SHROOM4Q9ULL8 1493 aa32.55■■■□□ 2.8
IFFO1-204ENST00000396840 SUPT5HO00267 1087 aaKnown RBP31.98■■■□□ 2.71
IFFO1-204ENST00000396840 ZCCHC6Q5VYS8 1495 aaKnown RBP31.71■■■□□ 2.67
IFFO1-204ENST00000396840 CCDC180Q9P1Z9 1646 aa31.63■■■□□ 2.65
IFFO1-204ENST00000396840 DCAF8L2P0C7V8 631 aa31.59■■■□□ 2.65
IFFO1-204ENST00000396840 CHIC1Q5VXU3 224 aa30.95■■■□□ 2.55
IFFO1-204ENST00000396840 MYO15BQ96JP2 1530 aa30.92■■■□□ 2.54
IFFO1-204ENST00000396840 DCAF1Q9Y4B6 1507 aa30.54■■■□□ 2.48
IFFO1-204ENST00000396840 PCGF6Q9BYE7 350 aa30.35■■■□□ 2.45
IFFO1-204ENST00000396840 HRCP23327 699 aa30.26■■■□□ 2.43
IFFO1-204ENST00000396840 LOC105371045A0A1W2PR82 267 aa30.24■■■□□ 2.43
IFFO1-204ENST00000396840 SCRIBQ14160 1630 aa30.02■■■□□ 2.4
IFFO1-204ENST00000396840 ABCC9O60706 1549 aa29.96■■■□□ 2.39
IFFO1-204ENST00000396840 PPARGC1BQ86YN6 1023 aaKnown RBP29.87■■■□□ 2.37
IFFO1-204ENST00000396840 RSF1Q96T23 1441 aaPredicted RBP29.82■■■□□ 2.36
IFFO1-204ENST00000396840 TRIM41Q8WV44 630 aa29.64■■■□□ 2.33
IFFO1-204ENST00000396840 FAM9AQ8IZU1 332 aaPredicted RBP29.63■■■□□ 2.33
IFFO1-204ENST00000396840 RB1CC1Q8TDY2 1594 aa29.59■■■□□ 2.33
IFFO1-204ENST00000396840 EHMT2Q96KQ7 1210 aa29.57■■■□□ 2.32
IFFO1-204ENST00000396840 TRIM26Q12899 539 aaPredicted RBP29.52■■■□□ 2.32
IFFO1-204ENST00000396840 CECR2Q9BXF3 1484 aa29.41■■■□□ 2.3
IFFO1-204ENST00000396840 NACADO15069 1562 aa29.27■■■□□ 2.28
IFFO1-204ENST00000396840 MROH2BQ7Z745 1585 aa29.27■■■□□ 2.28
IFFO1-204ENST00000396840 WIZO95785 1651 aa29.15■■■□□ 2.26
IFFO1-204ENST00000396840 ZEB1P37275 1124 aaPredicted RBP28.82■■■□□ 2.2
IFFO1-204ENST00000396840 BAZ1AQ9NRL2 1556 aaPredicted RBP28.81■■■□□ 2.2
IFFO1-204ENST00000396840 ABCC8Q09428 1581 aa28.64■■■□□ 2.17
IFFO1-204ENST00000396840 EIF4G1Q04637 1599 aaKnown RBP28.62■■■□□ 2.17
IFFO1-204ENST00000396840 TTBK1Q5TCY1 1321 aaPredicted RBP28.61■■■□□ 2.17
IFFO1-204ENST00000396840 CCDC88BA6NC98 1476 aa28.54■■■□□ 2.16
IFFO1-204ENST00000396840 TOP2AP11388 1531 aaKnown RBP28.54■■■□□ 2.16
IFFO1-204ENST00000396840 SMARCA4P51532 1647 aa28.53■■■□□ 2.16
IFFO1-204ENST00000396840 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.53■■■□□ 2.16
IFFO1-204ENST00000396840 PABPN1Q86U42 306 aaKnown RBP eCLIP28.47■■■□□ 2.15
IFFO1-204ENST00000396840 UNC13AQ9UPW8 1703 aa28.47■■■□□ 2.15
IFFO1-204ENST00000396840 SMARCA2P51531 1590 aa28.44■■■□□ 2.14
IFFO1-204ENST00000396840 CCER1Q8TC90 406 aaPredicted RBP28.4■■■□□ 2.14
IFFO1-204ENST00000396840 SOGA1O94964 1423 aa28.39■■■□□ 2.14
IFFO1-204ENST00000396840 CEP162Q5TB80 1403 aa28.27■■■□□ 2.12
IFFO1-204ENST00000396840 UBTFP17480 764 aaKnown RBP28.27■■■□□ 2.12
IFFO1-204ENST00000396840 RUSC2Q8N2Y8 1516 aa28.27■■■□□ 2.12
IFFO1-204ENST00000396840 CSRNP3Q8WYN3 585 aa28.21■■■□□ 2.11
IFFO1-204ENST00000396840 TNIKQ9UKE5 1360 aa28.12■■■□□ 2.09
IFFO1-204ENST00000396840 WRNQ14191 1432 aaPredicted RBP eCLIP28.1■■■□□ 2.09
IFFO1-204ENST00000396840 BICRAQ9NZM4 1560 aa28.09■■■□□ 2.09
IFFO1-204ENST00000396840 SCAF1Q9H7N4 1312 aaKnown RBP28.07■■■□□ 2.08
IFFO1-204ENST00000396840 EEA1Q15075 1411 aa27.99■■■□□ 2.07
IFFO1-204ENST00000396840 GOLGA3Q08378 1498 aa27.95■■■□□ 2.06
IFFO1-204ENST00000396840 RANGAP1P46060 587 aaPredicted RBP27.93■■■□□ 2.06
IFFO1-204ENST00000396840 SYNJ1O43426 1573 aa27.88■■■□□ 2.05
IFFO1-204ENST00000396840 DIEXFQ68CQ4 756 aaKnown RBP27.87■■■□□ 2.05
IFFO1-204ENST00000396840 PEG3Q9GZU2 1588 aa27.82■■■□□ 2.04
IFFO1-204ENST00000396840 HNRNPUL2Q1KMD3 747 aaKnown RBP27.8■■■□□ 2.04
IFFO1-204ENST00000396840 ATAD2BQ9ULI0 1458 aa27.79■■■□□ 2.04
IFFO1-204ENST00000396840 BAZ1BQ9UIG0 1483 aaKnown RBP27.78■■■□□ 2.04
IFFO1-204ENST00000396840 CEP164Q9UPV0 1460 aa27.75■■■□□ 2.03
IFFO1-204ENST00000396840 NEUROD1Q13562 356 aa27.73■■■□□ 2.03
IFFO1-204ENST00000396840 CLIP1P30622 1438 aa27.72■■■□□ 2.03
IFFO1-204ENST00000396840 ACIN1Q9UKV3 1341 aaKnown RBP27.68■■■□□ 2.02
IFFO1-204ENST00000396840 RAPGEF2Q9Y4G8 1499 aa27.65■■■□□ 2.02
IFFO1-204ENST00000396840 KIF21BO75037 1637 aa27.64■■■□□ 2.01
IFFO1-204ENST00000396840 APLP2Q06481 763 aa27.62■■■□□ 2.01
IFFO1-204ENST00000396840 PELP1Q8IZL8 1130 aaKnown RBP27.58■■■□□ 2.01
IFFO1-204ENST00000396840 ZNF316A6NFI3 1004 aaPredicted RBP27.56■■■□□ 2
IFFO1-204ENST00000396840 VPS8Q8N3P4 1428 aa27.55■■■□□ 2
IFFO1-204ENST00000396840 CENPBP07199 599 aaPredicted RBP27.48■■□□□ 1.99
IFFO1-204ENST00000396840 GTF3C3Q9Y5Q9 886 aa27.48■■□□□ 1.99
IFFO1-204ENST00000396840 YTHDC1Q96MU7 727 aaKnown RBP27.44■■□□□ 1.98
IFFO1-204ENST00000396840 TOP2BQ02880 1626 aa27.42■■□□□ 1.98
IFFO1-204ENST00000396840 MIER1Q8N108 512 aa27.29■■□□□ 1.96
IFFO1-204ENST00000396840 BIVM-ERCC5R4GMW8 1640 aa27.26■■□□□ 1.95
IFFO1-204ENST00000396840 KANK4Q5T7N3 995 aaPredicted RBP27.26■■□□□ 1.95
IFFO1-204ENST00000396840 PRXQ9BXM0 1461 aa27.22■■□□□ 1.95
IFFO1-204ENST00000396840 CUX1P39880 1505 aa27.21■■□□□ 1.95
IFFO1-204ENST00000396840 ARAP1Q96P48 1450 aa27.2■■□□□ 1.94
IFFO1-204ENST00000396840 ERICH3Q5RHP9 1530 aa27.15■■□□□ 1.94
IFFO1-204ENST00000396840 NCAPD3P42695 1498 aa27.14■■□□□ 1.94
IFFO1-204ENST00000396840 KIF27Q86VH2 1401 aa27.12■■□□□ 1.93
IFFO1-204ENST00000396840 ITGAEP38570 1179 aa27.1■■□□□ 1.93
IFFO1-204ENST00000396840 HMGXB3Q12766 1538 aa27.09■■□□□ 1.93
IFFO1-204ENST00000396840 DHX57Q6P158 1386 aaKnown RBP27.04■■□□□ 1.92
IFFO1-204ENST00000396840 CFTRP13569 1480 aa27.01■■□□□ 1.91
IFFO1-204ENST00000396840 ARHGAP35Q9NRY4 1499 aa26.95■■□□□ 1.91
IFFO1-204ENST00000396840 CUX2O14529 1486 aa26.91■■□□□ 1.9
IFFO1-204ENST00000396840 RRBP1Q9P2E9 1410 aaKnown RBP26.88■■□□□ 1.89
IFFO1-204ENST00000396840 CCNB3Q8WWL7 1395 aa26.87■■□□□ 1.89
IFFO1-204ENST00000396840 CLSPNQ9HAW4 1339 aa26.86■■□□□ 1.89
IFFO1-204ENST00000396840 IGF1RP08069 1367 aa26.84■■□□□ 1.89
IFFO1-204ENST00000396840 P3H3Q8IVL6 736 aa26.82■■□□□ 1.88
IFFO1-204ENST00000396840 ATP1B4Q9UN42 357 aaPredicted RBP26.8■■□□□ 1.88
IFFO1-204ENST00000396840 CARMIL1Q5VZK9 1371 aa26.75■■□□□ 1.87
IFFO1-204ENST00000396840 CADPSQ9ULU8 1353 aa26.74■■□□□ 1.87
IFFO1-204ENST00000396840 FGD5Q6ZNL6 1462 aa26.74■■□□□ 1.87
IFFO1-204ENST00000396840 RAB3GAP2Q9H2M9 1393 aa26.7■■□□□ 1.86
IFFO1-204ENST00000396840 FAM50AQ14320 339 aaKnown RBP26.69■■□□□ 1.86
IFFO1-204ENST00000396840 PRDM2Q13029 1718 aa26.67■■□□□ 1.86
IFFO1-204ENST00000396840 TIAM1Q13009 1591 aa26.64■■□□□ 1.85
IFFO1-204ENST00000396840 PHLDB1Q86UU1 1377 aa26.61■■□□□ 1.85
IFFO1-204ENST00000396840 LRRC9Q6ZRR7 1453 aa26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms