RNA–Protein interactions for RNA: ENST00000395460.6

C11orf49-204, Transcript of chromosome 11 open reading frame 49, humanhuman

TSL 1 (best) BASIC

Gene C11orf49, Length 1,916 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49-204ENST00000395460 NISCHQ9Y2I1 1504 aa34.48■■■■□ 3.11
C11orf49-204ENST00000395460 CCDC180Q9P1Z9 1646 aa29.43■■■□□ 2.3
C11orf49-204ENST00000395460 ZCCHC6Q5VYS8 1495 aaKnown RBP29.23■■■□□ 2.27
C11orf49-204ENST00000395460 SHROOM4Q9ULL8 1493 aa29■■■□□ 2.23
C11orf49-204ENST00000395460 DCAF1Q9Y4B6 1507 aa28.51■■■□□ 2.16
C11orf49-204ENST00000395460 SUPT5HO00267 1087 aaKnown RBP28.51■■■□□ 2.15
C11orf49-204ENST00000395460 DCAF8L2P0C7V8 631 aa28.08■■■□□ 2.09
C11orf49-204ENST00000395460 CHIC1Q5VXU3 224 aa27.96■■■□□ 2.07
C11orf49-204ENST00000395460 MYO15BQ96JP2 1530 aa27.79■■■□□ 2.04
C11orf49-204ENST00000395460 ABCC9O60706 1549 aa27.58■■■□□ 2.01
C11orf49-204ENST00000395460 SCRIBQ14160 1630 aa27.28■■□□□ 1.96
C11orf49-204ENST00000395460 RSF1Q96T23 1441 aaPredicted RBP27.25■■□□□ 1.95
C11orf49-204ENST00000395460 HRCP23327 699 aa27.24■■□□□ 1.95
C11orf49-204ENST00000395460 NACADO15069 1562 aa27.16■■□□□ 1.94
C11orf49-204ENST00000395460 RB1CC1Q8TDY2 1594 aa27.05■■□□□ 1.92
C11orf49-204ENST00000395460 PCGF6Q9BYE7 350 aa27■■□□□ 1.91
C11orf49-204ENST00000395460 LOC105371045A0A1W2PR82 267 aa26.93■■□□□ 1.9
C11orf49-204ENST00000395460 CECR2Q9BXF3 1484 aa26.72■■□□□ 1.87
C11orf49-204ENST00000395460 TRIM41Q8WV44 630 aa26.72■■□□□ 1.87
C11orf49-204ENST00000395460 MROH2BQ7Z745 1585 aa26.7■■□□□ 1.86
C11orf49-204ENST00000395460 TRIM26Q12899 539 aaPredicted RBP26.69■■□□□ 1.86
C11orf49-204ENST00000395460 BAZ1AQ9NRL2 1556 aaPredicted RBP26.54■■□□□ 1.84
C11orf49-204ENST00000395460 WIZO95785 1651 aa26.51■■□□□ 1.84
C11orf49-204ENST00000395460 EIF4G1Q04637 1599 aaKnown RBP26.39■■□□□ 1.81
C11orf49-204ENST00000395460 PPARGC1BQ86YN6 1023 aaKnown RBP26.37■■□□□ 1.81
C11orf49-204ENST00000395460 ZEB1P37275 1124 aaPredicted RBP26.28■■□□□ 1.8
C11orf49-204ENST00000395460 TOP2AP11388 1531 aaKnown RBP26.28■■□□□ 1.8
C11orf49-204ENST00000395460 FAM9AQ8IZU1 332 aaPredicted RBP26.26■■□□□ 1.79
C11orf49-204ENST00000395460 SMARCA4P51532 1647 aa26.23■■□□□ 1.79
C11orf49-204ENST00000395460 UNC13AQ9UPW8 1703 aa26.11■■□□□ 1.77
C11orf49-204ENST00000395460 SMARCA2P51531 1590 aa26.08■■□□□ 1.77
C11orf49-204ENST00000395460 CCDC88BA6NC98 1476 aa26.06■■□□□ 1.76
C11orf49-204ENST00000395460 ABCC8Q09428 1581 aa25.89■■□□□ 1.74
C11orf49-204ENST00000395460 PEG3Q9GZU2 1588 aa25.88■■□□□ 1.73
C11orf49-204ENST00000395460 EEA1Q15075 1411 aa25.88■■□□□ 1.73
C11orf49-204ENST00000395460 WRNQ14191 1432 aaPredicted RBP eCLIP25.86■■□□□ 1.73
C11orf49-204ENST00000395460 BICRAQ9NZM4 1560 aa25.84■■□□□ 1.73
C11orf49-204ENST00000395460 EHMT2Q96KQ7 1210 aa25.83■■□□□ 1.73
C11orf49-204ENST00000395460 TNIKQ9UKE5 1360 aa25.75■■□□□ 1.71
C11orf49-204ENST00000395460 SOGA1O94964 1423 aa25.69■■□□□ 1.7
C11orf49-204ENST00000395460 CEP162Q5TB80 1403 aa25.68■■□□□ 1.7
C11orf49-204ENST00000395460 CSRNP3Q8WYN3 585 aa25.62■■□□□ 1.69
C11orf49-204ENST00000395460 GOLGA3Q08378 1498 aa25.57■■□□□ 1.68
C11orf49-204ENST00000395460 PABPN1Q86U42 306 aaKnown RBP eCLIP25.55■■□□□ 1.68
C11orf49-204ENST00000395460 ATAD2BQ9ULI0 1458 aa25.53■■□□□ 1.68
C11orf49-204ENST00000395460 RUSC2Q8N2Y8 1516 aa25.51■■□□□ 1.67
C11orf49-204ENST00000395460 KIF21BO75037 1637 aa25.45■■□□□ 1.67
C11orf49-204ENST00000395460 CEP164Q9UPV0 1460 aa25.44■■□□□ 1.66
C11orf49-204ENST00000395460 BAZ1BQ9UIG0 1483 aaKnown RBP25.44■■□□□ 1.66
C11orf49-204ENST00000395460 SYNJ1O43426 1573 aa25.43■■□□□ 1.66
C11orf49-204ENST00000395460 CCER1Q8TC90 406 aaPredicted RBP25.41■■□□□ 1.66
C11orf49-204ENST00000395460 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.39■■□□□ 1.65
C11orf49-204ENST00000395460 UBTFP17480 764 aaKnown RBP25.38■■□□□ 1.65
C11orf49-204ENST00000395460 TOP2BQ02880 1626 aa25.23■■□□□ 1.63
C11orf49-204ENST00000395460 CLIP1P30622 1438 aa25.21■■□□□ 1.63
C11orf49-204ENST00000395460 VPS8Q8N3P4 1428 aa25.17■■□□□ 1.62
C11orf49-204ENST00000395460 BIVM-ERCC5R4GMW8 1640 aa25.16■■□□□ 1.62
C11orf49-204ENST00000395460 HMGXB3Q12766 1538 aa25.15■■□□□ 1.62
C11orf49-204ENST00000395460 NCAPD3P42695 1498 aa25.11■■□□□ 1.61
C11orf49-204ENST00000395460 RAPGEF2Q9Y4G8 1499 aa25.11■■□□□ 1.61
C11orf49-204ENST00000395460 TTBK1Q5TCY1 1321 aaPredicted RBP25.07■■□□□ 1.6
C11orf49-204ENST00000395460 ERICH3Q5RHP9 1530 aa25.07■■□□□ 1.6
C11orf49-204ENST00000395460 PRXQ9BXM0 1461 aa25■■□□□ 1.59
C11orf49-204ENST00000395460 SCAF1Q9H7N4 1312 aaKnown RBP25■■□□□ 1.59
C11orf49-204ENST00000395460 DIEXFQ68CQ4 756 aaKnown RBP24.99■■□□□ 1.59
C11orf49-204ENST00000395460 APLP2Q06481 763 aa24.92■■□□□ 1.58
C11orf49-204ENST00000395460 CFTRP13569 1480 aa24.89■■□□□ 1.58
C11orf49-204ENST00000395460 PELP1Q8IZL8 1130 aaKnown RBP24.88■■□□□ 1.57
C11orf49-204ENST00000395460 CUX1P39880 1505 aa24.87■■□□□ 1.57
C11orf49-204ENST00000395460 ACIN1Q9UKV3 1341 aaKnown RBP24.87■■□□□ 1.57
C11orf49-204ENST00000395460 ZNF316A6NFI3 1004 aaPredicted RBP24.86■■□□□ 1.57
C11orf49-204ENST00000395460 KIF27Q86VH2 1401 aa24.84■■□□□ 1.57
C11orf49-204ENST00000395460 ARAP1Q96P48 1450 aa24.81■■□□□ 1.56
C11orf49-204ENST00000395460 CENPBP07199 599 aaPredicted RBP24.78■■□□□ 1.56
C11orf49-204ENST00000395460 HNRNPUL2Q1KMD3 747 aaKnown RBP24.77■■□□□ 1.56
C11orf49-204ENST00000395460 CLSPNQ9HAW4 1339 aa24.75■■□□□ 1.55
C11orf49-204ENST00000395460 PRDM2Q13029 1718 aa24.73■■□□□ 1.55
C11orf49-204ENST00000395460 NEUROD1Q13562 356 aa24.72■■□□□ 1.55
C11orf49-204ENST00000395460 RRBP1Q9P2E9 1410 aaKnown RBP24.64■■□□□ 1.54
C11orf49-204ENST00000395460 ARHGAP35Q9NRY4 1499 aa24.59■■□□□ 1.53
C11orf49-204ENST00000395460 RANGAP1P46060 587 aaPredicted RBP24.59■■□□□ 1.53
C11orf49-204ENST00000395460 CUX2O14529 1486 aa24.57■■□□□ 1.52
C11orf49-204ENST00000395460 CADPSQ9ULU8 1353 aa24.55■■□□□ 1.52
C11orf49-204ENST00000395460 DHX57Q6P158 1386 aaKnown RBP24.54■■□□□ 1.52
C11orf49-204ENST00000395460 MAP3K1Q13233 1512 aa24.53■■□□□ 1.52
C11orf49-204ENST00000395460 KANK4Q5T7N3 995 aaPredicted RBP24.53■■□□□ 1.52
C11orf49-204ENST00000395460 IGF1RP08069 1367 aa24.51■■□□□ 1.51
C11orf49-204ENST00000395460 GTF3C3Q9Y5Q9 886 aa24.47■■□□□ 1.51
C11orf49-204ENST00000395460 CCNB3Q8WWL7 1395 aa24.45■■□□□ 1.5
C11orf49-204ENST00000395460 FGD5Q6ZNL6 1462 aa24.41■■□□□ 1.5
C11orf49-204ENST00000395460 CARMIL1Q5VZK9 1371 aa24.39■■□□□ 1.5
C11orf49-204ENST00000395460 MIER1Q8N108 512 aa24.39■■□□□ 1.49
C11orf49-204ENST00000395460 TIAM1Q13009 1591 aa24.38■■□□□ 1.49
C11orf49-204ENST00000395460 FHAD1B1AJZ9 1412 aa24.31■■□□□ 1.48
C11orf49-204ENST00000395460 LRRC9Q6ZRR7 1453 aa24.27■■□□□ 1.48
C11orf49-204ENST00000395460 FANCD2Q9BXW9 1451 aa24.27■■□□□ 1.48
C11orf49-204ENST00000395460 CC2D2AQ9P2K1 1620 aa24.27■■□□□ 1.48
C11orf49-204ENST00000395460 DNMBPQ6XZF7 1577 aa24.26■■□□□ 1.47
C11orf49-204ENST00000395460 ABCA10Q8WWZ4 1543 aa24.24■■□□□ 1.47
C11orf49-204ENST00000395460 CFAP43Q8NDM7 1665 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms