RNA–Protein interactions for RNA: ENST00000391812.5

C19orf48-202, Transcript of chromosome 19 open reading frame 48, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C19orf48, Length 1,666 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf48-202ENST00000391812 NISCHQ9Y2I1 1504 aa38.69■■■■□ 3.78
C19orf48-202ENST00000391812 CCDC180Q9P1Z9 1646 aa33.32■■■□□ 2.92
C19orf48-202ENST00000391812 ZCCHC6Q5VYS8 1495 aaKnown RBP32.81■■■□□ 2.84
C19orf48-202ENST00000391812 SHROOM4Q9ULL8 1493 aa32.27■■■□□ 2.76
C19orf48-202ENST00000391812 DCAF1Q9Y4B6 1507 aa32.07■■■□□ 2.72
C19orf48-202ENST00000391812 SUPT5HO00267 1087 aaKnown RBP31.61■■■□□ 2.65
C19orf48-202ENST00000391812 DCAF8L2P0C7V8 631 aa31.22■■■□□ 2.59
C19orf48-202ENST00000391812 MYO15BQ96JP2 1530 aa31.2■■■□□ 2.59
C19orf48-202ENST00000391812 ABCC9O60706 1549 aa31.02■■■□□ 2.56
C19orf48-202ENST00000391812 CHIC1Q5VXU3 224 aa31.02■■■□□ 2.56
C19orf48-202ENST00000391812 SCRIBQ14160 1630 aa30.69■■■□□ 2.5
C19orf48-202ENST00000391812 NACADO15069 1562 aa30.61■■■□□ 2.49
C19orf48-202ENST00000391812 RSF1Q96T23 1441 aaPredicted RBP30.44■■■□□ 2.46
C19orf48-202ENST00000391812 RB1CC1Q8TDY2 1594 aa30.34■■■□□ 2.45
C19orf48-202ENST00000391812 HRCP23327 699 aa30.06■■■□□ 2.4
C19orf48-202ENST00000391812 MROH2BQ7Z745 1585 aa29.94■■■□□ 2.38
C19orf48-202ENST00000391812 CECR2Q9BXF3 1484 aa29.91■■■□□ 2.38
C19orf48-202ENST00000391812 BAZ1AQ9NRL2 1556 aaPredicted RBP29.89■■■□□ 2.37
C19orf48-202ENST00000391812 WIZO95785 1651 aa29.83■■■□□ 2.37
C19orf48-202ENST00000391812 LOC105371045A0A1W2PR82 267 aa29.8■■■□□ 2.36
C19orf48-202ENST00000391812 PCGF6Q9BYE7 350 aa29.78■■■□□ 2.36
C19orf48-202ENST00000391812 UNC13AQ9UPW8 1703 aa29.72■■■□□ 2.35
C19orf48-202ENST00000391812 EIF4G1Q04637 1599 aaKnown RBP29.71■■■□□ 2.35
C19orf48-202ENST00000391812 TRIM41Q8WV44 630 aa29.65■■■□□ 2.34
C19orf48-202ENST00000391812 SMARCA4P51532 1647 aa29.55■■■□□ 2.32
C19orf48-202ENST00000391812 TOP2AP11388 1531 aaKnown RBP29.54■■■□□ 2.32
C19orf48-202ENST00000391812 TRIM26Q12899 539 aaPredicted RBP29.53■■■□□ 2.32
C19orf48-202ENST00000391812 SMARCA2P51531 1590 aa29.31■■■□□ 2.28
C19orf48-202ENST00000391812 BICRAQ9NZM4 1560 aa29.18■■■□□ 2.26
C19orf48-202ENST00000391812 CCDC88BA6NC98 1476 aa29.17■■■□□ 2.26
C19orf48-202ENST00000391812 PEG3Q9GZU2 1588 aa29.16■■■□□ 2.26
C19orf48-202ENST00000391812 FAM9AQ8IZU1 332 aaPredicted RBP29.11■■■□□ 2.25
C19orf48-202ENST00000391812 PPARGC1BQ86YN6 1023 aaKnown RBP29.05■■■□□ 2.24
C19orf48-202ENST00000391812 ZEB1P37275 1124 aaPredicted RBP29.03■■■□□ 2.24
C19orf48-202ENST00000391812 ABCC8Q09428 1581 aa29■■■□□ 2.23
C19orf48-202ENST00000391812 EEA1Q15075 1411 aa28.92■■■□□ 2.22
C19orf48-202ENST00000391812 WRNQ14191 1432 aaPredicted RBP eCLIP28.82■■■□□ 2.2
C19orf48-202ENST00000391812 TNIKQ9UKE5 1360 aa28.69■■■□□ 2.18
C19orf48-202ENST00000391812 ATAD2BQ9ULI0 1458 aa28.64■■■□□ 2.18
C19orf48-202ENST00000391812 SOGA1O94964 1423 aa28.64■■■□□ 2.18
C19orf48-202ENST00000391812 CEP162Q5TB80 1403 aa28.63■■■□□ 2.17
C19orf48-202ENST00000391812 EHMT2Q96KQ7 1210 aa28.59■■■□□ 2.17
C19orf48-202ENST00000391812 KIF21BO75037 1637 aa28.58■■■□□ 2.17
C19orf48-202ENST00000391812 GOLGA3Q08378 1498 aa28.57■■■□□ 2.16
C19orf48-202ENST00000391812 SYNJ1O43426 1573 aa28.56■■■□□ 2.16
C19orf48-202ENST00000391812 BAZ1BQ9UIG0 1483 aaKnown RBP28.55■■■□□ 2.16
C19orf48-202ENST00000391812 PABPN1Q86U42 306 aaKnown RBP eCLIP28.54■■■□□ 2.16not detected■□□□□ 8.1
C19orf48-202ENST00000391812 RUSC2Q8N2Y8 1516 aa28.49■■■□□ 2.15
C19orf48-202ENST00000391812 CSRNP3Q8WYN3 585 aa28.48■■■□□ 2.15
C19orf48-202ENST00000391812 CEP164Q9UPV0 1460 aa28.43■■■□□ 2.14
C19orf48-202ENST00000391812 BIVM-ERCC5R4GMW8 1640 aa28.38■■■□□ 2.13
C19orf48-202ENST00000391812 TOP2BQ02880 1626 aa28.36■■■□□ 2.13
C19orf48-202ENST00000391812 HMGXB3Q12766 1538 aa28.35■■■□□ 2.13
C19orf48-202ENST00000391812 NCAPD3P42695 1498 aa28.17■■■□□ 2.1
C19orf48-202ENST00000391812 UBTFP17480 764 aaKnown RBP28.17■■■□□ 2.1
C19orf48-202ENST00000391812 PRDM2Q13029 1718 aa28.16■■■□□ 2.1
C19orf48-202ENST00000391812 ERICH3Q5RHP9 1530 aa28.13■■■□□ 2.09
C19orf48-202ENST00000391812 CLIP1P30622 1438 aa28.09■■■□□ 2.09
C19orf48-202ENST00000391812 CCER1Q8TC90 406 aaPredicted RBP28.09■■■□□ 2.09
C19orf48-202ENST00000391812 VPS8Q8N3P4 1428 aa28.08■■■□□ 2.09
C19orf48-202ENST00000391812 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.06■■■□□ 2.08
C19orf48-202ENST00000391812 RAPGEF2Q9Y4G8 1499 aa28.04■■■□□ 2.08
C19orf48-202ENST00000391812 PRXQ9BXM0 1461 aa27.95■■■□□ 2.07
C19orf48-202ENST00000391812 CUX1P39880 1505 aa27.93■■■□□ 2.06
C19orf48-202ENST00000391812 CFTRP13569 1480 aa27.91■■■□□ 2.06
C19orf48-202ENST00000391812 TTBK1Q5TCY1 1321 aaPredicted RBP27.76■■■□□ 2.03
C19orf48-202ENST00000391812 KIF27Q86VH2 1401 aa27.76■■■□□ 2.03
C19orf48-202ENST00000391812 ARAP1Q96P48 1450 aa27.75■■■□□ 2.03
C19orf48-202ENST00000391812 APLP2Q06481 763 aa27.65■■■□□ 2.02
C19orf48-202ENST00000391812 DIEXFQ68CQ4 756 aaKnown RBP27.58■■■□□ 2.01
C19orf48-202ENST00000391812 SCAF1Q9H7N4 1312 aaKnown RBP27.51■■□□□ 1.99
C19orf48-202ENST00000391812 CADPSQ9ULU8 1353 aa27.49■■□□□ 1.99
C19orf48-202ENST00000391812 ZNF316A6NFI3 1004 aaPredicted RBP27.49■■□□□ 1.99
C19orf48-202ENST00000391812 ARHGAP35Q9NRY4 1499 aa27.48■■□□□ 1.99
C19orf48-202ENST00000391812 RRBP1Q9P2E9 1410 aaKnown RBP27.47■■□□□ 1.99
C19orf48-202ENST00000391812 CLSPNQ9HAW4 1339 aa27.46■■□□□ 1.99
C19orf48-202ENST00000391812 MAP3K1Q13233 1512 aa27.45■■□□□ 1.99
C19orf48-202ENST00000391812 HNRNPUL2Q1KMD3 747 aaKnown RBP27.45■■□□□ 1.98
C19orf48-202ENST00000391812 CUX2O14529 1486 aa27.42■■□□□ 1.98
C19orf48-202ENST00000391812 CC2D2AQ9P2K1 1620 aa27.41■■□□□ 1.98
C19orf48-202ENST00000391812 ACIN1Q9UKV3 1341 aaKnown RBP27.4■■□□□ 1.98
C19orf48-202ENST00000391812 FGD5Q6ZNL6 1462 aa27.39■■□□□ 1.98
C19orf48-202ENST00000391812 IGF1RP08069 1367 aa27.35■■□□□ 1.97
C19orf48-202ENST00000391812 DNMBPQ6XZF7 1577 aa27.33■■□□□ 1.97
C19orf48-202ENST00000391812 TIAM1Q13009 1591 aa27.32■■□□□ 1.96
C19orf48-202ENST00000391812 CENPBP07199 599 aaPredicted RBP27.32■■□□□ 1.96
C19orf48-202ENST00000391812 CFAP43Q8NDM7 1665 aa27.31■■□□□ 1.96
C19orf48-202ENST00000391812 DHX57Q6P158 1386 aaKnown RBP27.27■■□□□ 1.96
C19orf48-202ENST00000391812 PELP1Q8IZL8 1130 aaKnown RBP27.27■■□□□ 1.96
C19orf48-202ENST00000391812 RANGAP1P46060 587 aaPredicted RBP27.26■■□□□ 1.95
C19orf48-202ENST00000391812 FANCD2Q9BXW9 1451 aa27.25■■□□□ 1.95
C19orf48-202ENST00000391812 CUL7Q14999 1698 aa27.24■■□□□ 1.95
C19orf48-202ENST00000391812 KANK4Q5T7N3 995 aaPredicted RBP27.24■■□□□ 1.95
C19orf48-202ENST00000391812 CARMIL1Q5VZK9 1371 aa27.23■■□□□ 1.95
C19orf48-202ENST00000391812 NEUROD1Q13562 356 aa27.22■■□□□ 1.95
C19orf48-202ENST00000391812 ABCA10Q8WWZ4 1543 aa27.21■■□□□ 1.95
C19orf48-202ENST00000391812 CCNB3Q8WWL7 1395 aa27.2■■□□□ 1.95
C19orf48-202ENST00000391812 CTTNBP2Q8WZ74 1663 aa27.2■■□□□ 1.94
C19orf48-202ENST00000391812 WDR97A6NE52 1622 aa27.19■■□□□ 1.94
C19orf48-202ENST00000391812 EFCAB5A4FU69 1503 aa27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms