RNA–Protein interactions for RNA: ENST00000391089.1

SNORA48.4-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 134 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.4-201ENST00000391089 NISCHQ9Y2I1 1504 aa11.45□□□□□ -0.58
SNORA48.4-201ENST00000391089 CCDC180Q9P1Z9 1646 aa9.96□□□□□ -0.81
SNORA48.4-201ENST00000391089 DCAF1Q9Y4B6 1507 aa9.67□□□□□ -0.86
SNORA48.4-201ENST00000391089 ZCCHC6Q5VYS8 1495 aaKnown RBP9.67□□□□□ -0.86
SNORA48.4-201ENST00000391089 MYO15BQ96JP2 1530 aa9.55□□□□□ -0.88
SNORA48.4-201ENST00000391089 ABCC9O60706 1549 aa9.49□□□□□ -0.89
SNORA48.4-201ENST00000391089 NACADO15069 1562 aa9.26□□□□□ -0.93
SNORA48.4-201ENST00000391089 SHROOM4Q9ULL8 1493 aa9.14□□□□□ -0.95
SNORA48.4-201ENST00000391089 DCAF8L2P0C7V8 631 aa9.11□□□□□ -0.95
SNORA48.4-201ENST00000391089 RB1CC1Q8TDY2 1594 aa9.06□□□□□ -0.96
SNORA48.4-201ENST00000391089 SUPT5HO00267 1087 aaKnown RBP9.01□□□□□ -0.97
SNORA48.4-201ENST00000391089 DNAJC5BQ9UF47 199 aa8.96□□□□□ -0.98
SNORA48.4-201ENST00000391089 RSF1Q96T23 1441 aaPredicted RBP8.93□□□□□ -0.98
SNORA48.4-201ENST00000391089 SCRIBQ14160 1630 aa8.91□□□□□ -0.98
SNORA48.4-201ENST00000391089 BAZ1AQ9NRL2 1556 aaPredicted RBP8.88□□□□□ -0.99
SNORA48.4-201ENST00000391089 CHIC1Q5VXU3 224 aa8.88□□□□□ -0.99
SNORA48.4-201ENST00000391089 PABPN1Q86U42 306 aaKnown RBP eCLIP8.79□□□□□ -1
SNORA48.4-201ENST00000391089 UNC13AQ9UPW8 1703 aa8.79□□□□□ -1
SNORA48.4-201ENST00000391089 PEG3Q9GZU2 1588 aa8.75□□□□□ -1.01
SNORA48.4-201ENST00000391089 MROH2BQ7Z745 1585 aa8.73□□□□□ -1.01
SNORA48.4-201ENST00000391089 CECR2Q9BXF3 1484 aa8.7□□□□□ -1.02
SNORA48.4-201ENST00000391089 TOP2AP11388 1531 aaKnown RBP8.7□□□□□ -1.02
SNORA48.4-201ENST00000391089 SMARCA4P51532 1647 aa8.7□□□□□ -1.02
SNORA48.4-201ENST00000391089 BICRAQ9NZM4 1560 aa8.68□□□□□ -1.02
SNORA48.4-201ENST00000391089 SMARCA2P51531 1590 aa8.64□□□□□ -1.03
SNORA48.4-201ENST00000391089 TRIM41Q8WV44 630 aa8.63□□□□□ -1.03
SNORA48.4-201ENST00000391089 EEA1Q15075 1411 aa8.63□□□□□ -1.03
SNORA48.4-201ENST00000391089 WIZO95785 1651 aa8.61□□□□□ -1.03
SNORA48.4-201ENST00000391089 CC2D2AQ9P2K1 1620 aa8.58□□□□□ -1.04
SNORA48.4-201ENST00000391089 EIF4G1Q04637 1599 aaKnown RBP8.56□□□□□ -1.04
SNORA48.4-201ENST00000391089 CCDC88BA6NC98 1476 aa8.55□□□□□ -1.04
SNORA48.4-201ENST00000391089 ATAD2BQ9ULI0 1458 aa8.54□□□□□ -1.04
SNORA48.4-201ENST00000391089 HMGXB3Q12766 1538 aa8.54□□□□□ -1.04
SNORA48.4-201ENST00000391089 NCAPD3P42695 1498 aa8.53□□□□□ -1.04
SNORA48.4-201ENST00000391089 BAZ1BQ9UIG0 1483 aaKnown RBP8.5□□□□□ -1.05
SNORA48.4-201ENST00000391089 TRIM26Q12899 539 aaPredicted RBP8.45□□□□□ -1.06
SNORA48.4-201ENST00000391089 WRNQ14191 1432 aaPredicted RBP eCLIP8.43□□□□□ -1.06
SNORA48.4-201ENST00000391089 ZEB1P37275 1124 aaPredicted RBP8.41□□□□□ -1.06
SNORA48.4-201ENST00000391089 TNIKQ9UKE5 1360 aa8.4□□□□□ -1.06
SNORA48.4-201ENST00000391089 DNAJC5Q9H3Z4 198 aa8.4□□□□□ -1.06
SNORA48.4-201ENST00000391089 LOC105371045A0A1W2PR82 267 aa8.37□□□□□ -1.07
SNORA48.4-201ENST00000391089 HRCP23327 699 aa8.37□□□□□ -1.07
SNORA48.4-201ENST00000391089 CSRNP3Q8WYN3 585 aa8.37□□□□□ -1.07
SNORA48.4-201ENST00000391089 CFTRP13569 1480 aa8.36□□□□□ -1.07
SNORA48.4-201ENST00000391089 CEP164Q9UPV0 1460 aa8.36□□□□□ -1.07
SNORA48.4-201ENST00000391089 GOLGA3Q08378 1498 aa8.34□□□□□ -1.07
SNORA48.4-201ENST00000391089 KIF21BO75037 1637 aa8.34□□□□□ -1.07
SNORA48.4-201ENST00000391089 TOP2BQ02880 1626 aa8.34□□□□□ -1.07
SNORA48.4-201ENST00000391089 BIVM-ERCC5R4GMW8 1640 aa8.32□□□□□ -1.08
SNORA48.4-201ENST00000391089 ERICH3Q5RHP9 1530 aa8.3□□□□□ -1.08
SNORA48.4-201ENST00000391089 PCGF6Q9BYE7 350 aa8.29□□□□□ -1.08
SNORA48.4-201ENST00000391089 ABCC8Q09428 1581 aa8.29□□□□□ -1.08
SNORA48.4-201ENST00000391089 PRDM2Q13029 1718 aa8.29□□□□□ -1.08
SNORA48.4-201ENST00000391089 CADPSQ9ULU8 1353 aa8.28□□□□□ -1.08
SNORA48.4-201ENST00000391089 CUX2O14529 1486 aa8.26□□□□□ -1.09
SNORA48.4-201ENST00000391089 ERCC6Q03468 1493 aa8.26□□□□□ -1.09
SNORA48.4-201ENST00000391089 CEP162Q5TB80 1403 aa8.26□□□□□ -1.09
SNORA48.4-201ENST00000391089 KIF27Q86VH2 1401 aa8.25□□□□□ -1.09
SNORA48.4-201ENST00000391089 SYNJ1O43426 1573 aa8.25□□□□□ -1.09
SNORA48.4-201ENST00000391089 SOGA1O94964 1423 aa8.24□□□□□ -1.09
SNORA48.4-201ENST00000391089 PRXQ9BXM0 1461 aa8.23□□□□□ -1.09
SNORA48.4-201ENST00000391089 FAM9AQ8IZU1 332 aaPredicted RBP8.21□□□□□ -1.1
SNORA48.4-201ENST00000391089 UBTFP17480 764 aaKnown RBP8.19□□□□□ -1.1
SNORA48.4-201ENST00000391089 VPS8Q8N3P4 1428 aa8.18□□□□□ -1.1
SNORA48.4-201ENST00000391089 LAMC3Q9Y6N6 1575 aa8.18□□□□□ -1.1
SNORA48.4-201ENST00000391089 CLIP1P30622 1438 aa8.17□□□□□ -1.1
SNORA48.4-201ENST00000391089 CUX1P39880 1505 aa8.16□□□□□ -1.1
SNORA48.4-201ENST00000391089 MAP3K1Q13233 1512 aa8.15□□□□□ -1.1
SNORA48.4-201ENST00000391089 APLP2Q06481 763 aa8.14□□□□□ -1.11
SNORA48.4-201ENST00000391089 PDS5BQ9NTI5 1447 aa8.13□□□□□ -1.11
SNORA48.4-201ENST00000391089 CLSPNQ9HAW4 1339 aa8.13□□□□□ -1.11
SNORA48.4-201ENST00000391089 DNMBPQ6XZF7 1577 aa8.12□□□□□ -1.11
SNORA48.4-201ENST00000391089 RUSC2Q8N2Y8 1516 aa8.12□□□□□ -1.11
SNORA48.4-201ENST00000391089 ABCA10Q8WWZ4 1543 aa8.12□□□□□ -1.11
SNORA48.4-201ENST00000391089 FANCD2Q9BXW9 1451 aa8.11□□□□□ -1.11
SNORA48.4-201ENST00000391089 RAPGEF2Q9Y4G8 1499 aa8.11□□□□□ -1.11
SNORA48.4-201ENST00000391089 IGF1RP08069 1367 aa8.1□□□□□ -1.11
SNORA48.4-201ENST00000391089 WDR97A6NE52 1622 aa8.09□□□□□ -1.11
SNORA48.4-201ENST00000391089 NESP48681 1621 aa8.08□□□□□ -1.12
SNORA48.4-201ENST00000391089 FHAD1B1AJZ9 1412 aa8.08□□□□□ -1.12
SNORA48.4-201ENST00000391089 CUL7Q14999 1698 aa8.08□□□□□ -1.12
SNORA48.4-201ENST00000391089 CARMIL1Q5VZK9 1371 aa8.07□□□□□ -1.12
SNORA48.4-201ENST00000391089 ACIN1Q9UKV3 1341 aaKnown RBP8.06□□□□□ -1.12
SNORA48.4-201ENST00000391089 THOC2Q8NI27 1593 aaKnown RBP8.06□□□□□ -1.12
SNORA48.4-201ENST00000391089 EFCAB5A4FU69 1503 aa8.06□□□□□ -1.12
SNORA48.4-201ENST00000391089 FGD5Q6ZNL6 1462 aa8.06□□□□□ -1.12
SNORA48.4-201ENST00000391089 AQRO60306 1485 aaKnown RBP eCLIP8.05□□□□□ -1.12
SNORA48.4-201ENST00000391089 TOPBP1Q92547 1522 aa8.04□□□□□ -1.12
SNORA48.4-201ENST00000391089 KIF21AQ7Z4S6 1674 aa8.03□□□□□ -1.12
SNORA48.4-201ENST00000391089 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.03□□□□□ -1.12
SNORA48.4-201ENST00000391089 POLA1P09884 1462 aaPredicted RBP8.01□□□□□ -1.13
SNORA48.4-201ENST00000391089 RRBP1Q9P2E9 1410 aaKnown RBP8□□□□□ -1.13
SNORA48.4-201ENST00000391089 FMN1Q68DA7 1419 aa7.99□□□□□ -1.13
SNORA48.4-201ENST00000391089 ARAP1Q96P48 1450 aa7.99□□□□□ -1.13
SNORA48.4-201ENST00000391089 ARHGAP35Q9NRY4 1499 aa7.98□□□□□ -1.13
SNORA48.4-201ENST00000391089 CCER1Q8TC90 406 aaPredicted RBP7.97□□□□□ -1.13
SNORA48.4-201ENST00000391089 FYCO1Q9BQS8 1478 aa7.96□□□□□ -1.13
SNORA48.4-201ENST00000391089 ABCA5Q8WWZ7 1642 aa7.96□□□□□ -1.14
SNORA48.4-201ENST00000391089 TIMELESSQ9UNS1 1208 aa7.95□□□□□ -1.14
SNORA48.4-201ENST00000391089 CASKIN1Q8WXD9 1431 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms