RNA–Protein interactions for RNA: ENST00000390534.1

TRAJ3-201, Transcript of T cell receptor alpha joining 3, humanhuman

APPRIS P1 BASIC

Gene TRAJ3, Length 62 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ3-201ENST00000390534 CHIC1Q5VXU3 224 aa3.73□□□□□ -1.81
TRAJ3-201ENST00000390534 AEBP2Q6ZN18 517 aaPredicted RBP3.66□□□□□ -1.82
TRAJ3-201ENST00000390534 PHF23Q9BUL5 403 aaPredicted RBP3.32□□□□□ -1.88
TRAJ3-201ENST00000390534 PLPPR3Q6T4P5 718 aa3.11□□□□□ -1.91
TRAJ3-201ENST00000390534 SENP3Q9H4L4 574 aaPredicted RBP3.04□□□□□ -1.92
TRAJ3-201ENST00000390534 EHMT2Q96KQ7 1210 aa3.02□□□□□ -1.93
TRAJ3-201ENST00000390534 KCNA4P22459 653 aa2.95□□□□□ -1.94
TRAJ3-201ENST00000390534 ADRA2BP18089 450 aa2.94□□□□□ -1.94
TRAJ3-201ENST00000390534 CSRNP3Q8WYN3 585 aa2.86□□□□□ -1.95
TRAJ3-201ENST00000390534 PPP6R1Q9UPN7 881 aa2.86□□□□□ -1.95
TRAJ3-201ENST00000390534 SLC4A1APQ9BWU0 796 aaKnown RBP2.84□□□□□ -1.95
TRAJ3-201ENST00000390534 FOXD1Q16676 465 aa2.81□□□□□ -1.96
TRAJ3-201ENST00000390534 PPP4R3CPQ6ZMV5 832 aa2.77□□□□□ -1.97
TRAJ3-201ENST00000390534 SLC24A1O60721 1099 aa2.76□□□□□ -1.97
TRAJ3-201ENST00000390534 NCBP3Q53F19 620 aaKnown RBP2.74□□□□□ -1.97
TRAJ3-201ENST00000390534 ZBTB22O15209 634 aa2.73□□□□□ -1.97
TRAJ3-201ENST00000390534 NPM3O75607 178 aaKnown RBP2.72□□□□□ -1.97
TRAJ3-201ENST00000390534 PIAS4Q8N2W9 510 aaPredicted RBP2.71□□□□□ -1.98
TRAJ3-201ENST00000390534 RTN4Q9NQC3 1192 aaKnown RBP2.71□□□□□ -1.98
TRAJ3-201ENST00000390534 AMER1Q5JTC6 1135 aaPredicted RBP2.68□□□□□ -1.98
TRAJ3-201ENST00000390534 FOXD4L1Q9NU39 408 aa2.65□□□□□ -1.99
TRAJ3-201ENST00000390534 CNKSR2Q8WXI2 1034 aa2.64□□□□□ -1.99
TRAJ3-201ENST00000390534 FKBP8Q14318 412 aa2.58□□□□□ -2
TRAJ3-201ENST00000390534 SCAF1Q9H7N4 1312 aaKnown RBP2.58□□□□□ -2
TRAJ3-201ENST00000390534 DNAJC5BQ9UF47 199 aa2.57□□□□□ -2
TRAJ3-201ENST00000390534 MAPK8IP2Q13387 824 aaPredicted RBP2.56□□□□□ -2
TRAJ3-201ENST00000390534 RNF216Q9NWF9 866 aaPredicted RBP2.54□□□□□ -2
TRAJ3-201ENST00000390534 SLC4A2P04920 1241 aa2.53□□□□□ -2
TRAJ3-201ENST00000390534 MYCNP04198 464 aaPredicted RBP2.51□□□□□ -2.01
TRAJ3-201ENST00000390534 ATXN8OSP0DMR3 200 aa2.5□□□□□ -2.01
TRAJ3-201ENST00000390534 MSH5O43196 834 aa2.49□□□□□ -2.01
TRAJ3-201ENST00000390534 HOXD11P31277 338 aaPredicted RBP2.48□□□□□ -2.01
TRAJ3-201ENST00000390534 PLCB2Q00722 1185 aa2.47□□□□□ -2.01
TRAJ3-201ENST00000390534 PRKCSHP14314 528 aaPredicted RBP2.46□□□□□ -2.02
TRAJ3-201ENST00000390534 DMRT2Q9Y5R5 561 aa2.46□□□□□ -2.02
TRAJ3-201ENST00000390534 HAP1P54257 671 aaPredicted RBP2.45□□□□□ -2.02
TRAJ3-201ENST00000390534 ATF5Q9Y2D1 282 aaPredicted RBP2.45□□□□□ -2.02
TRAJ3-201ENST00000390534 DCAF8L2P0C7V8 631 aa2.43□□□□□ -2.02
TRAJ3-201ENST00000390534 BCANQ96GW7 911 aa2.43□□□□□ -2.02
TRAJ3-201ENST00000390534 TAOK2Q9UL54 1235 aa2.42□□□□□ -2.02
TRAJ3-201ENST00000390534 VASPP50552 380 aaPredicted RBP2.39□□□□□ -2.03
TRAJ3-201ENST00000390534 TPRNQ4KMQ1 711 aa2.39□□□□□ -2.03
TRAJ3-201ENST00000390534 FBXO3Q9UK99 471 aa2.39□□□□□ -2.03
TRAJ3-201ENST00000390534 SPDYE4A6NLX3 237 aa2.38□□□□□ -2.03
TRAJ3-201ENST00000390534 SAMD1Q6SPF0 538 aaPredicted RBP2.38□□□□□ -2.03
TRAJ3-201ENST00000390534 VSIG10Q8N0Z9 540 aa2.38□□□□□ -2.03
TRAJ3-201ENST00000390534 U3KPZ7 1027 aaPredicted RBP2.38□□□□□ -2.03
TRAJ3-201ENST00000390534 DCAF8L1A6NGE4 600 aa2.37□□□□□ -2.03
TRAJ3-201ENST00000390534 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP2.37□□□□□ -2.03
TRAJ3-201ENST00000390534 PKD2Q13563 968 aa2.37□□□□□ -2.03
TRAJ3-201ENST00000390534 HNRNPUL2Q1KMD3 747 aaKnown RBP2.37□□□□□ -2.03
TRAJ3-201ENST00000390534 IFNLR1Q8IU57 520 aaPredicted RBP2.37□□□□□ -2.03
TRAJ3-201ENST00000390534 GRWD1Q9BQ67 446 aaKnown RBP eCLIP2.37□□□□□ -2.03
TRAJ3-201ENST00000390534 FBLN2P98095 1184 aa2.36□□□□□ -2.03
TRAJ3-201ENST00000390534 ZNF219Q9P2Y4 722 aaPredicted RBP2.36□□□□□ -2.03
TRAJ3-201ENST00000390534 KDM2AQ9Y2K7 1162 aa2.36□□□□□ -2.03
TRAJ3-201ENST00000390534 MKRN4PQ13434 485 aaPredicted RBP2.35□□□□□ -2.03
TRAJ3-201ENST00000390534 PROM2Q8N271 834 aa2.35□□□□□ -2.03
TRAJ3-201ENST00000390534 PAXIP1Q6ZW49 1069 aaPredicted RBP2.34□□□□□ -2.03
TRAJ3-201ENST00000390534 CFAP44Q96MT7 982 aa2.34□□□□□ -2.03
TRAJ3-201ENST00000390534 ZBTB4Q9P1Z0 1013 aaPredicted RBP2.34□□□□□ -2.03
TRAJ3-201ENST00000390534 NPM1P06748 294 aaKnown RBP eCLIP2.33□□□□□ -2.04
TRAJ3-201ENST00000390534 BBXQ8WY36 941 aaPredicted RBP2.33□□□□□ -2.04
TRAJ3-201ENST00000390534 TIMELESSQ9UNS1 1208 aa2.33□□□□□ -2.04
TRAJ3-201ENST00000390534 ECM2O94769 699 aaPredicted RBP2.32□□□□□ -2.04
TRAJ3-201ENST00000390534 TSHZ2Q9NRE2 1034 aa2.32□□□□□ -2.04
TRAJ3-201ENST00000390534 TULP1O00294 542 aaPredicted RBP2.31□□□□□ -2.04
TRAJ3-201ENST00000390534 RGL2O15211 777 aa2.31□□□□□ -2.04
TRAJ3-201ENST00000390534 APLP2Q06481 763 aa2.3□□□□□ -2.04
TRAJ3-201ENST00000390534 KLHL34Q8N239 644 aa2.3□□□□□ -2.04
TRAJ3-201ENST00000390534 SPOCK2Q92563 424 aa2.3□□□□□ -2.04
TRAJ3-201ENST00000390534 NBR1Q14596 966 aa2.29□□□□□ -2.04
TRAJ3-201ENST00000390534 SPRYD3Q8NCJ5 442 aa2.29□□□□□ -2.04
TRAJ3-201ENST00000390534 CHGAP10645 457 aaKnown RBP2.27□□□□□ -2.05
TRAJ3-201ENST00000390534 TRHP20396 242 aaPredicted RBP2.27□□□□□ -2.05
TRAJ3-201ENST00000390534 DNAJC5Q9H3Z4 198 aa2.27□□□□□ -2.05
TRAJ3-201ENST00000390534 DAXXQ9UER7 740 aaPredicted RBP2.27□□□□□ -2.05
TRAJ3-201ENST00000390534 GTF3C3Q9Y5Q9 886 aa2.27□□□□□ -2.05
TRAJ3-201ENST00000390534 POLA2Q14181 598 aa2.26□□□□□ -2.05
TRAJ3-201ENST00000390534 SPINK5Q9NQ38 1064 aaPredicted RBP2.26□□□□□ -2.05
TRAJ3-201ENST00000390534 PLCD3Q8N3E9 789 aa2.25□□□□□ -2.05
TRAJ3-201ENST00000390534 ARXQ96QS3 562 aa2.25□□□□□ -2.05
TRAJ3-201ENST00000390534 CIZ1Q9ULV3 898 aaPredicted RBP2.25□□□□□ -2.05
TRAJ3-201ENST00000390534 TMEM132AQ24JP5 1023 aa2.24□□□□□ -2.05
TRAJ3-201ENST00000390534 CAPN15O75808 1086 aa2.23□□□□□ -2.05
TRAJ3-201ENST00000390534 C14orf37Q86TY3 774 aa2.23□□□□□ -2.05
TRAJ3-201ENST00000390534 HS6ST3Q8IZP7 471 aa2.23□□□□□ -2.05
TRAJ3-201ENST00000390534 STAG3Q9UJ98 1225 aa2.23□□□□□ -2.05
TRAJ3-201ENST00000390534 ABCB7O75027 752 aa2.22□□□□□ -2.05
TRAJ3-201ENST00000390534 NKX1-1Q15270 411 aaPredicted RBP2.22□□□□□ -2.05
TRAJ3-201ENST00000390534 HOMEZQ8IX15 550 aa2.22□□□□□ -2.05
TRAJ3-201ENST00000390534 MIER1Q8N108 512 aa2.22□□□□□ -2.05
TRAJ3-201ENST00000390534 RNF25Q96BH1 459 aaPredicted RBP2.22□□□□□ -2.05
TRAJ3-201ENST00000390534 ZBTB12Q9Y330 459 aaPredicted RBP2.22□□□□□ -2.05
TRAJ3-201ENST00000390534 ERICH6Q7L0X2 663 aa2.21□□□□□ -2.06
TRAJ3-201ENST00000390534 OSCARQ8IYS5 282 aa2.21□□□□□ -2.06
TRAJ3-201ENST00000390534 ZNF692Q9BU19 519 aaPredicted RBP2.21□□□□□ -2.06
TRAJ3-201ENST00000390534 GTPBP6O43824 516 aaPredicted RBP2.2□□□□□ -2.06
TRAJ3-201ENST00000390534 PABPN1Q86U42 306 aaKnown RBP eCLIP2.2□□□□□ -2.06
TRAJ3-201ENST00000390534 SSUH2Q9Y2M2 353 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms