RNA–Protein interactions for RNA: ENST00000384211.1

RNU4-31P-201, Transcript of RNA, U4 small nuclear 31, pseudogene, humanhuman

BASIC

Gene RNU4-31P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-31P-201ENST00000384211 CHIC1Q5VXU3 224 aa17.97■□□□□ 0.47
RNU4-31P-201ENST00000384211 AEBP2Q6ZN18 517 aaPredicted RBP17.8■□□□□ 0.44
RNU4-31P-201ENST00000384211 PHF23Q9BUL5 403 aaPredicted RBP16.05■□□□□ 0.16
RNU4-31P-201ENST00000384211 PLPPR3Q6T4P5 718 aa14.81□□□□□ -0.04
RNU4-31P-201ENST00000384211 SENP3Q9H4L4 574 aaPredicted RBP14.69□□□□□ -0.06
RNU4-31P-201ENST00000384211 ADRA2BP18089 450 aa14.13□□□□□ -0.15
RNU4-31P-201ENST00000384211 PPP6R1Q9UPN7 881 aa13.93□□□□□ -0.18
RNU4-31P-201ENST00000384211 KCNA4P22459 653 aa13.91□□□□□ -0.18
RNU4-31P-201ENST00000384211 EHMT2Q96KQ7 1210 aa13.83□□□□□ -0.2
RNU4-31P-201ENST00000384211 FOXD1Q16676 465 aa13.73□□□□□ -0.21
RNU4-31P-201ENST00000384211 CSRNP3Q8WYN3 585 aa13.41□□□□□ -0.26
RNU4-31P-201ENST00000384211 SLC4A1APQ9BWU0 796 aaKnown RBP13.26□□□□□ -0.29
RNU4-31P-201ENST00000384211 PPP4R3CPQ6ZMV5 832 aa13.25□□□□□ -0.29
RNU4-31P-201ENST00000384211 PIAS4Q8N2W9 510 aaPredicted RBP13□□□□□ -0.33
RNU4-31P-201ENST00000384211 NPM3O75607 178 aaKnown RBP12.98□□□□□ -0.33
RNU4-31P-201ENST00000384211 NCBP3Q53F19 620 aaKnown RBP12.93□□□□□ -0.34
RNU4-31P-201ENST00000384211 ZBTB22O15209 634 aa12.92□□□□□ -0.34
RNU4-31P-201ENST00000384211 CNKSR2Q8WXI2 1034 aa12.63□□□□□ -0.39
RNU4-31P-201ENST00000384211 FOXD4L1Q9NU39 408 aa12.44□□□□□ -0.42
RNU4-31P-201ENST00000384211 MAPK8IP2Q13387 824 aaPredicted RBP12.43□□□□□ -0.42
RNU4-31P-201ENST00000384211 DNAJC5BQ9UF47 199 aa12.43□□□□□ -0.42
RNU4-31P-201ENST00000384211 SCAF1Q9H7N4 1312 aaKnown RBP12.37□□□□□ -0.43
RNU4-31P-201ENST00000384211 RTN4Q9NQC3 1192 aaKnown RBP12.36□□□□□ -0.43
RNU4-31P-201ENST00000384211 SLC24A1O60721 1099 aa12.29□□□□□ -0.44
RNU4-31P-201ENST00000384211 RNF216Q9NWF9 866 aaPredicted RBP12.21□□□□□ -0.45
RNU4-31P-201ENST00000384211 SLC4A2P04920 1241 aa12.16□□□□□ -0.46
RNU4-31P-201ENST00000384211 AMER1Q5JTC6 1135 aaPredicted RBP12.14□□□□□ -0.47
RNU4-31P-201ENST00000384211 MSH5O43196 834 aa12.12□□□□□ -0.47
RNU4-31P-201ENST00000384211 HOXD11P31277 338 aaPredicted RBP12.01□□□□□ -0.49
RNU4-31P-201ENST00000384211 FKBP8Q14318 412 aa11.95□□□□□ -0.5
RNU4-31P-201ENST00000384211 DMRT2Q9Y5R5 561 aa11.93□□□□□ -0.5
RNU4-31P-201ENST00000384211 ATXN8OSP0DMR3 200 aa11.87□□□□□ -0.51
RNU4-31P-201ENST00000384211 MYCNP04198 464 aaPredicted RBP11.83□□□□□ -0.52
RNU4-31P-201ENST00000384211 ATF5Q9Y2D1 282 aaPredicted RBP11.72□□□□□ -0.53
RNU4-31P-201ENST00000384211 U3KPZ7 1027 aaPredicted RBP11.39□□□□□ -0.59
RNU4-31P-201ENST00000384211 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.33□□□□□ -0.6
RNU4-31P-201ENST00000384211 SAMD1Q6SPF0 538 aaPredicted RBP11.29□□□□□ -0.6
RNU4-31P-201ENST00000384211 DCAF8L1A6NGE4 600 aa11.28□□□□□ -0.6
RNU4-31P-201ENST00000384211 PLCB2Q00722 1185 aa11.27□□□□□ -0.61
RNU4-31P-201ENST00000384211 ZNF219Q9P2Y4 722 aaPredicted RBP11.25□□□□□ -0.61
RNU4-31P-201ENST00000384211 MKRN4PQ13434 485 aaPredicted RBP11.23□□□□□ -0.61
RNU4-31P-201ENST00000384211 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.22□□□□□ -0.61
RNU4-31P-201ENST00000384211 HNRNPUL2Q1KMD3 747 aaKnown RBP11.22□□□□□ -0.61
RNU4-31P-201ENST00000384211 PROM2Q8N271 834 aa11.2□□□□□ -0.62
RNU4-31P-201ENST00000384211 SPDYE4A6NLX3 237 aa11.17□□□□□ -0.62
RNU4-31P-201ENST00000384211 IFNLR1Q8IU57 520 aaPredicted RBP11.13□□□□□ -0.63
RNU4-31P-201ENST00000384211 FBXO3Q9UK99 471 aa11.13□□□□□ -0.63
RNU4-31P-201ENST00000384211 VASPP50552 380 aaPredicted RBP11.11□□□□□ -0.63
RNU4-31P-201ENST00000384211 PRKCSHP14314 528 aaPredicted RBP11.1□□□□□ -0.63
RNU4-31P-201ENST00000384211 PKD2Q13563 968 aa11.08□□□□□ -0.64
RNU4-31P-201ENST00000384211 HAP1P54257 671 aaPredicted RBP11.06□□□□□ -0.64
RNU4-31P-201ENST00000384211 DCAF8L2P0C7V8 631 aa10.93□□□□□ -0.66
RNU4-31P-201ENST00000384211 TAOK2Q9UL54 1235 aa10.93□□□□□ -0.66
RNU4-31P-201ENST00000384211 KDM2AQ9Y2K7 1162 aa10.93□□□□□ -0.66
RNU4-31P-201ENST00000384211 BCANQ96GW7 911 aa10.92□□□□□ -0.66
RNU4-31P-201ENST00000384211 NPM1P06748 294 aaKnown RBP eCLIP10.91□□□□□ -0.66
RNU4-31P-201ENST00000384211 VSIG10Q8N0Z9 540 aa10.91□□□□□ -0.66
RNU4-31P-201ENST00000384211 FBLN2P98095 1184 aa10.88□□□□□ -0.67
RNU4-31P-201ENST00000384211 SPINK5Q9NQ38 1064 aaPredicted RBP10.88□□□□□ -0.67
RNU4-31P-201ENST00000384211 APLP2Q06481 763 aa10.84□□□□□ -0.67
RNU4-31P-201ENST00000384211 POLA2Q14181 598 aa10.84□□□□□ -0.67
RNU4-31P-201ENST00000384211 TRHP20396 242 aaPredicted RBP10.8□□□□□ -0.68
RNU4-31P-201ENST00000384211 BBXQ8WY36 941 aaPredicted RBP10.77□□□□□ -0.69
RNU4-31P-201ENST00000384211 TPRNQ4KMQ1 711 aa10.75□□□□□ -0.69
RNU4-31P-201ENST00000384211 PAXIP1Q6ZW49 1069 aaPredicted RBP10.74□□□□□ -0.69
RNU4-31P-201ENST00000384211 RGL2O15211 777 aa10.72□□□□□ -0.69
RNU4-31P-201ENST00000384211 SPOCK2Q92563 424 aa10.72□□□□□ -0.69
RNU4-31P-201ENST00000384211 ECM2O94769 699 aaPredicted RBP10.71□□□□□ -0.69
RNU4-31P-201ENST00000384211 CFAP44Q96MT7 982 aa10.69□□□□□ -0.7
RNU4-31P-201ENST00000384211 TSHZ2Q9NRE2 1034 aa10.69□□□□□ -0.7
RNU4-31P-201ENST00000384211 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.66□□□□□ -0.7
RNU4-31P-201ENST00000384211 KLHL34Q8N239 644 aa10.65□□□□□ -0.7
RNU4-31P-201ENST00000384211 CAPN15O75808 1086 aa10.63□□□□□ -0.71
RNU4-31P-201ENST00000384211 RNF39Q9H2S5 420 aa10.61□□□□□ -0.71
RNU4-31P-201ENST00000384211 ABCB7O75027 752 aa10.6□□□□□ -0.71
RNU4-31P-201ENST00000384211 SPRYD3Q8NCJ5 442 aa10.57□□□□□ -0.72
RNU4-31P-201ENST00000384211 DNAJC5Q9H3Z4 198 aa10.54□□□□□ -0.72
RNU4-31P-201ENST00000384211 STAG3Q9UJ98 1225 aa10.53□□□□□ -0.72
RNU4-31P-201ENST00000384211 ZNF692Q9BU19 519 aaPredicted RBP10.51□□□□□ -0.73
RNU4-31P-201ENST00000384211 SSUH2Q9Y2M2 353 aa10.51□□□□□ -0.73
RNU4-31P-201ENST00000384211 ZBTB12Q9Y330 459 aaPredicted RBP10.5□□□□□ -0.73
RNU4-31P-201ENST00000384211 CHGAP10645 457 aaKnown RBP10.49□□□□□ -0.73
RNU4-31P-201ENST00000384211 PLCD3Q8N3E9 789 aa10.49□□□□□ -0.73
RNU4-31P-201ENST00000384211 MIER1Q8N108 512 aa10.47□□□□□ -0.73
RNU4-31P-201ENST00000384211 OSCARQ8IYS5 282 aa10.45□□□□□ -0.74
RNU4-31P-201ENST00000384211 PABPN1Q86U42 306 aaKnown RBP eCLIP10.44□□□□□ -0.74
RNU4-31P-201ENST00000384211 CIZ1Q9ULV3 898 aaPredicted RBP10.42□□□□□ -0.74
RNU4-31P-201ENST00000384211 C1QBPQ07021 282 aaKnown RBP10.41□□□□□ -0.74
RNU4-31P-201ENST00000384211 RNF25Q96BH1 459 aaPredicted RBP10.41□□□□□ -0.74
RNU4-31P-201ENST00000384211 SPDYE2BA6NHP3 402 aa10.39□□□□□ -0.75
RNU4-31P-201ENST00000384211 SPDYE6P0CI01 402 aa10.39□□□□□ -0.75
RNU4-31P-201ENST00000384211 SPDYE2Q495Y8 402 aa10.39□□□□□ -0.75
RNU4-31P-201ENST00000384211 DSG3P32926 999 aa10.38□□□□□ -0.75
RNU4-31P-201ENST00000384211 NKX1-1Q15270 411 aaPredicted RBP10.38□□□□□ -0.75
RNU4-31P-201ENST00000384211 HS6ST3Q8IZP7 471 aa10.37□□□□□ -0.75
RNU4-31P-201ENST00000384211 TIMELESSQ9UNS1 1208 aa10.34□□□□□ -0.75
RNU4-31P-201ENST00000384211 GTPBP6O43824 516 aaPredicted RBP10.29□□□□□ -0.76
RNU4-31P-201ENST00000384211 NBR1Q14596 966 aa10.28□□□□□ -0.76
RNU4-31P-201ENST00000384211 TULP1O00294 542 aaPredicted RBP10.25□□□□□ -0.77
RNU4-31P-201ENST00000384211 NUBP1P53384 320 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms