RNA–Protein interactions for RNA: ENST00000381998.8

MSR1-204, Transcript of macrophage scavenger receptor 1, humanhuman

TSL 1 (best) BASIC

Gene MSR1, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1-204ENST00000381998 AEBP2Q6ZN18 517 aaPredicted RBP16.37■□□□□ 0.21
MSR1-204ENST00000381998 CHIC1Q5VXU3 224 aa16.06■□□□□ 0.16
MSR1-204ENST00000381998 PHF23Q9BUL5 403 aaPredicted RBP14.35□□□□□ -0.11
MSR1-204ENST00000381998 SENP3Q9H4L4 574 aaPredicted RBP13.54□□□□□ -0.24
MSR1-204ENST00000381998 PLPPR3Q6T4P5 718 aa13.12□□□□□ -0.31
MSR1-204ENST00000381998 FOXD1Q16676 465 aa12.74□□□□□ -0.37
MSR1-204ENST00000381998 PPP6R1Q9UPN7 881 aa12.63□□□□□ -0.39
MSR1-204ENST00000381998 ADRA2BP18089 450 aa12.62□□□□□ -0.39
MSR1-204ENST00000381998 NISCHQ9Y2I1 1504 aa12.26□□□□□ -0.45
MSR1-204ENST00000381998 PIAS4Q8N2W9 510 aaPredicted RBP12.06□□□□□ -0.48
MSR1-204ENST00000381998 KCNA4P22459 653 aa11.93□□□□□ -0.5
MSR1-204ENST00000381998 SLC24A1O60721 1099 aa11.83□□□□□ -0.52
MSR1-204ENST00000381998 POTEDQ86YR6 584 aa11.83□□□□□ -0.52
MSR1-204ENST00000381998 PPP4R3CPQ6ZMV5 832 aa11.69□□□□□ -0.54
MSR1-204ENST00000381998 EHMT2Q96KQ7 1210 aa11.54□□□□□ -0.56
MSR1-204ENST00000381998 MAPK8IP2Q13387 824 aaPredicted RBP11.41□□□□□ -0.58
MSR1-204ENST00000381998 MSH5O43196 834 aa11.36□□□□□ -0.59
MSR1-204ENST00000381998 NPM3O75607 178 aaKnown RBP11.36□□□□□ -0.59
MSR1-204ENST00000381998 SLC4A1APQ9BWU0 796 aaKnown RBP11.28□□□□□ -0.6
MSR1-204ENST00000381998 NCBP3Q53F19 620 aaKnown RBP11.27□□□□□ -0.6
MSR1-204ENST00000381998 CNKSR2Q8WXI2 1034 aa11.19□□□□□ -0.62
MSR1-204ENST00000381998 SCAF1Q9H7N4 1312 aaKnown RBP11.16□□□□□ -0.62
MSR1-204ENST00000381998 CSRNP3Q8WYN3 585 aa11.16□□□□□ -0.62
MSR1-204ENST00000381998 ZBTB22O15209 634 aa11.06□□□□□ -0.64
MSR1-204ENST00000381998 DMRT2Q9Y5R5 561 aa10.9□□□□□ -0.66
MSR1-204ENST00000381998 RNF216Q9NWF9 866 aaPredicted RBP10.88□□□□□ -0.67
MSR1-204ENST00000381998 HOXD11P31277 338 aaPredicted RBP10.77□□□□□ -0.68
MSR1-204ENST00000381998 SLC4A2P04920 1241 aa10.7□□□□□ -0.7
MSR1-204ENST00000381998 RTN4Q9NQC3 1192 aaKnown RBP10.7□□□□□ -0.7
MSR1-204ENST00000381998 FOXD4L1Q9NU39 408 aa10.69□□□□□ -0.7
MSR1-204ENST00000381998 DAXXQ9UER7 740 aaPredicted RBP10.66□□□□□ -0.7
MSR1-204ENST00000381998 DNAJC5BQ9UF47 199 aa10.63□□□□□ -0.71
MSR1-204ENST00000381998 DCAF8L1A6NGE4 600 aa10.61□□□□□ -0.71
MSR1-204ENST00000381998 AMER1Q5JTC6 1135 aaPredicted RBP10.57□□□□□ -0.72
MSR1-204ENST00000381998 CCDC180Q9P1Z9 1646 aa10.47□□□□□ -0.73
MSR1-204ENST00000381998 ZCCHC6Q5VYS8 1495 aaKnown RBP10.36□□□□□ -0.75
MSR1-204ENST00000381998 ATF5Q9Y2D1 282 aaPredicted RBP10.35□□□□□ -0.75
MSR1-204ENST00000381998 MYCNP04198 464 aaPredicted RBP10.34□□□□□ -0.75
MSR1-204ENST00000381998 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.34□□□□□ -0.75
MSR1-204ENST00000381998 SHROOM4Q9ULL8 1493 aa10.33□□□□□ -0.76
MSR1-204ENST00000381998 U3KPZ7 1027 aaPredicted RBP10.28□□□□□ -0.76
MSR1-204ENST00000381998 PRKCSHP14314 528 aaPredicted RBP10.15□□□□□ -0.78
MSR1-204ENST00000381998 SUPT5HO00267 1087 aaKnown RBP10.14□□□□□ -0.79
MSR1-204ENST00000381998 ARXQ96QS3 562 aa10.14□□□□□ -0.79
MSR1-204ENST00000381998 DCAF8L2P0C7V8 631 aa10.14□□□□□ -0.79
MSR1-204ENST00000381998 ATXN8OSP0DMR3 200 aa10.12□□□□□ -0.79
MSR1-204ENST00000381998 DCAF1Q9Y4B6 1507 aa10.08□□□□□ -0.8
MSR1-204ENST00000381998 FKBP8Q14318 412 aa10.06□□□□□ -0.8
MSR1-204ENST00000381998 TTBK1Q5TCY1 1321 aaPredicted RBP10.04□□□□□ -0.8
MSR1-204ENST00000381998 SPINK5Q9NQ38 1064 aaPredicted RBP10.02□□□□□ -0.81
MSR1-204ENST00000381998 SAMD1Q6SPF0 538 aaPredicted RBP10.01□□□□□ -0.81
MSR1-204ENST00000381998 TIMELESSQ9UNS1 1208 aa9.97□□□□□ -0.81
MSR1-204ENST00000381998 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.96□□□□□ -0.82
MSR1-204ENST00000381998 APLP2Q06481 763 aa9.96□□□□□ -0.82
MSR1-204ENST00000381998 HNRNPUL2Q1KMD3 747 aaKnown RBP9.96□□□□□ -0.82
MSR1-204ENST00000381998 MYO15BQ96JP2 1530 aa9.95□□□□□ -0.82
MSR1-204ENST00000381998 PELP1Q8IZL8 1130 aaKnown RBP9.94□□□□□ -0.82
MSR1-204ENST00000381998 ZNF219Q9P2Y4 722 aaPredicted RBP9.93□□□□□ -0.82
MSR1-204ENST00000381998 TAOK2Q9UL54 1235 aa9.93□□□□□ -0.82
MSR1-204ENST00000381998 TRHP20396 242 aaPredicted RBP9.92□□□□□ -0.82
MSR1-204ENST00000381998 RNF39Q9H2S5 420 aa9.91□□□□□ -0.82
MSR1-204ENST00000381998 MYT1Q01538 1121 aa9.89□□□□□ -0.83
MSR1-204ENST00000381998 BCANQ96GW7 911 aa9.86□□□□□ -0.83
MSR1-204ENST00000381998 HRCP23327 699 aa9.85□□□□□ -0.83
MSR1-204ENST00000381998 CAPN15O75808 1086 aa9.84□□□□□ -0.83
MSR1-204ENST00000381998 TULP1O00294 542 aaPredicted RBP9.83□□□□□ -0.84
MSR1-204ENST00000381998 MKRN4PQ13434 485 aaPredicted RBP9.83□□□□□ -0.84
MSR1-204ENST00000381998 ERICH6Q7L0X2 663 aa9.83□□□□□ -0.84
MSR1-204ENST00000381998 ABCB7O75027 752 aa9.8□□□□□ -0.84
MSR1-204ENST00000381998 RANGAP1P46060 587 aaPredicted RBP9.8□□□□□ -0.84
MSR1-204ENST00000381998 POLA2Q14181 598 aa9.8□□□□□ -0.84
MSR1-204ENST00000381998 HOMEZQ8IX15 550 aa9.8□□□□□ -0.84
MSR1-204ENST00000381998 PCGF6Q9BYE7 350 aa9.77□□□□□ -0.85
MSR1-204ENST00000381998 SCRIBQ14160 1630 aa9.77□□□□□ -0.85
MSR1-204ENST00000381998 ABCC9O60706 1549 aa9.75□□□□□ -0.85
MSR1-204ENST00000381998 TPRNQ4KMQ1 711 aa9.74□□□□□ -0.85
MSR1-204ENST00000381998 NACADO15069 1562 aa9.71□□□□□ -0.86
MSR1-204ENST00000381998 PLCB2Q00722 1185 aa9.7□□□□□ -0.86
MSR1-204ENST00000381998 C1QBPQ07021 282 aaKnown RBP9.68□□□□□ -0.86
MSR1-204ENST00000381998 PPARGC1BQ86YN6 1023 aaKnown RBP9.68□□□□□ -0.86
MSR1-204ENST00000381998 RSF1Q96T23 1441 aaPredicted RBP9.67□□□□□ -0.86
MSR1-204ENST00000381998 LOC105371045A0A1W2PR82 267 aa9.66□□□□□ -0.86
MSR1-204ENST00000381998 SPDYE4A6NLX3 237 aa9.65□□□□□ -0.86
MSR1-204ENST00000381998 DSG3P32926 999 aa9.58□□□□□ -0.88
MSR1-204ENST00000381998 GTF3C3Q9Y5Q9 886 aa9.58□□□□□ -0.88
MSR1-204ENST00000381998 CECR2Q9BXF3 1484 aa9.57□□□□□ -0.88
MSR1-204ENST00000381998 HAP1P54257 671 aaPredicted RBP9.56□□□□□ -0.88
MSR1-204ENST00000381998 RB1CC1Q8TDY2 1594 aa9.55□□□□□ -0.88
MSR1-204ENST00000381998 FBLN2P98095 1184 aa9.55□□□□□ -0.88
MSR1-204ENST00000381998 PODXL2Q9NZ53 605 aa9.54□□□□□ -0.88
MSR1-204ENST00000381998 MROH2BQ7Z745 1585 aa9.52□□□□□ -0.89
MSR1-204ENST00000381998 TRIM26Q12899 539 aaPredicted RBP9.51□□□□□ -0.89
MSR1-204ENST00000381998 OSCARQ8IYS5 282 aa9.5□□□□□ -0.89
MSR1-204ENST00000381998 KLHL34Q8N239 644 aa9.5□□□□□ -0.89
MSR1-204ENST00000381998 WIZO95785 1651 aa9.45□□□□□ -0.9
MSR1-204ENST00000381998 PROM2Q8N271 834 aa9.45□□□□□ -0.9
MSR1-204ENST00000381998 CACNB1Q02641 598 aaPredicted RBP9.45□□□□□ -0.9
MSR1-204ENST00000381998 TRIM41Q8WV44 630 aa9.42□□□□□ -0.9
MSR1-204ENST00000381998 BAZ1AQ9NRL2 1556 aaPredicted RBP9.42□□□□□ -0.9
MSR1-204ENST00000381998 VSIG10Q8N0Z9 540 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms