RNA–Protein interactions for RNA: ENST00000381285.8

ITSN1-204, Transcript of intersectin 1, humanhuman

TSL 5 BASIC

Gene ITSN1, Length 6,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-204ENST00000381285 DCAF8L2P0C7V8 631 aa27.63■■■□□ 2.01
ITSN1-204ENST00000381285 EHMT2Q96KQ7 1210 aa25.61■■□□□ 1.69
ITSN1-204ENST00000381285 SUPT5HO00267 1087 aaKnown RBP25.51■■□□□ 1.68
ITSN1-204ENST00000381285 SHROOM4Q9ULL8 1493 aa25.06■■□□□ 1.6
ITSN1-204ENST00000381285 TTBK1Q5TCY1 1321 aaPredicted RBP24.61■■□□□ 1.53
ITSN1-204ENST00000381285 APLP2Q06481 763 aa24.47■■□□□ 1.51
ITSN1-204ENST00000381285 RANGAP1P46060 587 aaPredicted RBP24.45■■□□□ 1.5
ITSN1-204ENST00000381285 FAM9AQ8IZU1 332 aaPredicted RBP24.36■■□□□ 1.49
ITSN1-204ENST00000381285 ATP1B4Q9UN42 357 aaPredicted RBP24.21■■□□□ 1.47
ITSN1-204ENST00000381285 PELP1Q8IZL8 1130 aaKnown RBP24.03■■□□□ 1.44
ITSN1-204ENST00000381285 NISCHQ9Y2I1 1504 aa23.86■■□□□ 1.41
ITSN1-204ENST00000381285 PCGF6Q9BYE7 350 aa23.75■■□□□ 1.39
ITSN1-204ENST00000381285 MYT1LQ9UL68 1186 aa23.57■■□□□ 1.36
ITSN1-204ENST00000381285 ERICH6Q7L0X2 663 aa23.47■■□□□ 1.35
ITSN1-204ENST00000381285 CHIC1Q5VXU3 224 aa23.46■■□□□ 1.35
ITSN1-204ENST00000381285 UBTFP17480 764 aaKnown RBP23.44■■□□□ 1.34
ITSN1-204ENST00000381285 TRIM41Q8WV44 630 aa23.35■■□□□ 1.33
ITSN1-204ENST00000381285 CCER1Q8TC90 406 aaPredicted RBP23.32■■□□□ 1.32
ITSN1-204ENST00000381285 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.28■■□□□ 1.32
ITSN1-204ENST00000381285 HNRNPUL2Q1KMD3 747 aaKnown RBP23.28■■□□□ 1.32
ITSN1-204ENST00000381285 PPARGC1BQ86YN6 1023 aaKnown RBP23.27■■□□□ 1.32
ITSN1-204ENST00000381285 POLR3GLQ9BT43 218 aa23.19■■□□□ 1.3
ITSN1-204ENST00000381285 YTHDC1Q96MU7 727 aaKnown RBP23.17■■□□□ 1.3
ITSN1-204ENST00000381285 CNGB1Q14028 1251 aaPredicted RBP23.14■■□□□ 1.3
ITSN1-204ENST00000381285 ITGAEP38570 1179 aa23.06■■□□□ 1.28
ITSN1-204ENST00000381285 SLC4A1APQ9BWU0 796 aaKnown RBP22.96■■□□□ 1.27
ITSN1-204ENST00000381285 CENPBP07199 599 aaPredicted RBP22.93■■□□□ 1.26
ITSN1-204ENST00000381285 NEFLP07196 543 aa22.9■■□□□ 1.26
ITSN1-204ENST00000381285 MYT1Q01538 1121 aa22.63■■□□□ 1.21
ITSN1-204ENST00000381285 ZEB1P37275 1124 aaPredicted RBP22.59■■□□□ 1.21
ITSN1-204ENST00000381285 DAXXQ9UER7 740 aaPredicted RBP22.55■■□□□ 1.2
ITSN1-204ENST00000381285 FBLN2P98095 1184 aa22.36■■□□□ 1.17
ITSN1-204ENST00000381285 SLC24A1O60721 1099 aa22.35■■□□□ 1.17
ITSN1-204ENST00000381285 BCL11AQ9H165 835 aa22.3■■□□□ 1.16
ITSN1-204ENST00000381285 PLPPR3Q6T4P5 718 aa22.27■■□□□ 1.16
ITSN1-204ENST00000381285 PABPN1Q86U42 306 aaKnown RBP eCLIP22.27■■□□□ 1.16
ITSN1-204ENST00000381285 BCANQ96GW7 911 aa22.27■■□□□ 1.16
ITSN1-204ENST00000381285 CLSPNQ9HAW4 1339 aa22.23■■□□□ 1.15
ITSN1-204ENST00000381285 FAM50AQ14320 339 aaKnown RBP22.22■■□□□ 1.15
ITSN1-204ENST00000381285 TRIM52Q96A61 297 aa22.21■■□□□ 1.15
ITSN1-204ENST00000381285 LOC105371045A0A1W2PR82 267 aa22.19■■□□□ 1.14
ITSN1-204ENST00000381285 ZNF326Q5BKZ1 582 aaKnown RBP22.15■■□□□ 1.14
ITSN1-204ENST00000381285 ARID3CA6NKF2 412 aa22.12■■□□□ 1.13
ITSN1-204ENST00000381285 NEUROD1Q13562 356 aa22.05■■□□□ 1.12
ITSN1-204ENST00000381285 TRIM26Q12899 539 aaPredicted RBP22.02■■□□□ 1.11
ITSN1-204ENST00000381285 ZNF316A6NFI3 1004 aaPredicted RBP22■■□□□ 1.11
ITSN1-204ENST00000381285 ABCC9O60706 1549 aa21.87■■□□□ 1.09
ITSN1-204ENST00000381285 HRCP23327 699 aa21.82■■□□□ 1.08
ITSN1-204ENST00000381285 ZBTB47Q9UFB7 747 aaPredicted RBP21.81■■□□□ 1.08
ITSN1-204ENST00000381285 P3H3Q8IVL6 736 aa21.8■■□□□ 1.08
ITSN1-204ENST00000381285 ZNF777Q9ULD5 760 aaPredicted RBP21.75■■□□□ 1.07
ITSN1-204ENST00000381285 ESF1Q9H501 851 aaKnown RBP21.73■■□□□ 1.07
ITSN1-204ENST00000381285 CANXP27824 592 aaKnown RBP21.69■■□□□ 1.06
ITSN1-204ENST00000381285 CHGAP10645 457 aaKnown RBP21.65■■□□□ 1.06
ITSN1-204ENST00000381285 RTL5Q5HYW3 569 aaPredicted RBP21.64■■□□□ 1.05
ITSN1-204ENST00000381285 STAG3Q9UJ98 1225 aa21.62■■□□□ 1.05
ITSN1-204ENST00000381285 PLEKHG5O94827 1062 aa21.61■■□□□ 1.05
ITSN1-204ENST00000381285 SCAF1Q9H7N4 1312 aaKnown RBP21.59■■□□□ 1.05
ITSN1-204ENST00000381285 A0A0G2JS52 829 aa21.59■■□□□ 1.05
ITSN1-204ENST00000381285 NEFMP07197 916 aa21.59■■□□□ 1.05
ITSN1-204ENST00000381285 SENP3Q9H4L4 574 aaPredicted RBP21.58■■□□□ 1.04
ITSN1-204ENST00000381285 DIEXFQ68CQ4 756 aaKnown RBP21.5■■□□□ 1.03
ITSN1-204ENST00000381285 ANP32CO43423 234 aa21.42■■□□□ 1.02
ITSN1-204ENST00000381285 NPM1P06748 294 aaKnown RBP eCLIP21.37■■□□□ 1.01
ITSN1-204ENST00000381285 ZBTB7CA1YPR0 619 aa21.37■■□□□ 1.01
ITSN1-204ENST00000381285 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.3■■□□□ 11e-6■■■■□ 23.9
ITSN1-204ENST00000381285 NPM2Q86SE8 214 aaKnown RBP21.23■□□□□ 0.99
ITSN1-204ENST00000381285 SALL2Q9Y467 1007 aaPredicted RBP21.23■□□□□ 0.99
ITSN1-204ENST00000381285 C14orf37Q86TY3 774 aa21.18■□□□□ 0.98
ITSN1-204ENST00000381285 CDK11AQ9UQ88 783 aaPredicted RBP21.17■□□□□ 0.98
ITSN1-204ENST00000381285 CHIC2Q9UKJ5 165 aa21.09■□□□□ 0.97
ITSN1-204ENST00000381285 HSP90AA1P07900 732 aaKnown RBP21.03■□□□□ 0.96
ITSN1-204ENST00000381285 KDM2AQ9Y2K7 1162 aa21.02■□□□□ 0.95
ITSN1-204ENST00000381285 HAP1P54257 671 aaPredicted RBP21■□□□□ 0.95
ITSN1-204ENST00000381285 ARXQ96QS3 562 aa21■□□□□ 0.95
ITSN1-204ENST00000381285 ARID4BQ4LE39 1312 aaPredicted RBP20.99■□□□□ 0.95
ITSN1-204ENST00000381285 GTF3C3Q9Y5Q9 886 aa20.98■□□□□ 0.95
ITSN1-204ENST00000381285 KCNH8Q96L42 1107 aa20.96■□□□□ 0.95
ITSN1-204ENST00000381285 FAM9BQ8IZU0 186 aa20.95■□□□□ 0.94
ITSN1-204ENST00000381285 PPP1R15AO75807 674 aaPredicted RBP20.91■□□□□ 0.94
ITSN1-204ENST00000381285 TULP1O00294 542 aaPredicted RBP20.91■□□□□ 0.94
ITSN1-204ENST00000381285 CHMP7Q8WUX9 453 aaPredicted RBP20.87■□□□□ 0.93
ITSN1-204ENST00000381285 CSRNP3Q8WYN3 585 aa20.85■□□□□ 0.93
ITSN1-204ENST00000381285 ANP32AP39687 249 aaKnown RBP20.84■□□□□ 0.93
ITSN1-204ENST00000381285 LMOD2Q6P5Q4 547 aa20.81■□□□□ 0.92
ITSN1-204ENST00000381285 TONSLQ96HA7 1378 aa20.81■□□□□ 0.92
ITSN1-204ENST00000381285 SENP3-EIF4A1A0A087X0R7 540 aa20.77■□□□□ 0.92
ITSN1-204ENST00000381285 TRHP20396 242 aaPredicted RBP20.77■□□□□ 0.92
ITSN1-204ENST00000381285 HNRNPUQ00839 825 aaKnown RBP eCLIP20.76■□□□□ 0.91
ITSN1-204ENST00000381285 WDR43Q15061 677 aaKnown RBP eCLIP20.75■□□□□ 0.91
ITSN1-204ENST00000381285 DDX10Q13206 875 aaKnown RBP20.75■□□□□ 0.91
ITSN1-204ENST00000381285 TMC1Q8TDI8 760 aa20.74■□□□□ 0.91
ITSN1-204ENST00000381285 TSPY4P0CV99 314 aa20.73■□□□□ 0.91
ITSN1-204ENST00000381285 TSPY10P0CW01 314 aa20.73■□□□□ 0.91
ITSN1-204ENST00000381285 ANP32BQ92688 251 aaKnown RBP20.73■□□□□ 0.91
ITSN1-204ENST00000381285 HIRIP3Q9BW71 556 aaPredicted RBP20.72■□□□□ 0.91
ITSN1-204ENST00000381285 UPF2Q9HAU5 1272 aaKnown RBP20.71■□□□□ 0.91
ITSN1-204ENST00000381285 PPM1GO15355 546 aaPredicted RBP20.71■□□□□ 0.91
ITSN1-204ENST00000381285 TAOK2Q9UL54 1235 aa20.71■□□□□ 0.91
ITSN1-204ENST00000381285 NPHP1O15259 732 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms