RNA–Protein interactions for RNA: ENST00000378076.3

ITGA8-201, Transcript of integrin subunit alpha 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGA8, Length 6,755 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA8-201ENST00000378076 DCAF8L2P0C7V8 631 aa29.77■■■□□ 2.36
ITGA8-201ENST00000378076 EHMT2Q96KQ7 1210 aa28.64■■■□□ 2.18
ITGA8-201ENST00000378076 SUPT5HO00267 1087 aaKnown RBP28.37■■■□□ 2.13
ITGA8-201ENST00000378076 SHROOM4Q9ULL8 1493 aa27.85■■■□□ 2.05
ITGA8-201ENST00000378076 TTBK1Q5TCY1 1321 aaPredicted RBP27.63■■■□□ 2.01
ITGA8-201ENST00000378076 PELP1Q8IZL8 1130 aaKnown RBP27.37■■□□□ 1.97
ITGA8-201ENST00000378076 FAM9AQ8IZU1 332 aaPredicted RBP27.08■■□□□ 1.93
ITGA8-201ENST00000378076 PCGF6Q9BYE7 350 aa27.01■■□□□ 1.91
ITGA8-201ENST00000378076 ERICH6Q7L0X2 663 aa26.97■■□□□ 1.91
ITGA8-201ENST00000378076 RANGAP1P46060 587 aaPredicted RBP26.96■■□□□ 1.91
ITGA8-201ENST00000378076 APLP2Q06481 763 aa26.79■■□□□ 1.88
ITGA8-201ENST00000378076 YTHDC1Q96MU7 727 aaKnown RBP26.71■■□□□ 1.87
ITGA8-201ENST00000378076 MYT1Q01538 1121 aa26.56■■□□□ 1.84
ITGA8-201ENST00000378076 ATP1B4Q9UN42 357 aaPredicted RBP26.45■■□□□ 1.82
ITGA8-201ENST00000378076 CCER1Q8TC90 406 aaPredicted RBP26.39■■□□□ 1.82
ITGA8-201ENST00000378076 CENPBP07199 599 aaPredicted RBP26.36■■□□□ 1.81
ITGA8-201ENST00000378076 PPARGC1BQ86YN6 1023 aaKnown RBP26.35■■□□□ 1.81
ITGA8-201ENST00000378076 NISCHQ9Y2I1 1504 aa26.02■■□□□ 1.76
ITGA8-201ENST00000378076 NEFLP07196 543 aa25.94■■□□□ 1.74
ITGA8-201ENST00000378076 CNGB1Q14028 1251 aaPredicted RBP25.93■■□□□ 1.74
ITGA8-201ENST00000378076 TRIM41Q8WV44 630 aa25.79■■□□□ 1.72
ITGA8-201ENST00000378076 UBTFP17480 764 aaKnown RBP25.77■■□□□ 1.72
ITGA8-201ENST00000378076 POLR3GLQ9BT43 218 aa25.77■■□□□ 1.72
ITGA8-201ENST00000378076 ZEB1P37275 1124 aaPredicted RBP25.74■■□□□ 1.71
ITGA8-201ENST00000378076 ITGAEP38570 1179 aa25.6■■□□□ 1.69
ITGA8-201ENST00000378076 CHIC1Q5VXU3 224 aa25.48■■□□□ 1.67
ITGA8-201ENST00000378076 DAXXQ9UER7 740 aaPredicted RBP25.48■■□□□ 1.67
ITGA8-201ENST00000378076 MYT1LQ9UL68 1186 aa25.28■■□□□ 1.64
ITGA8-201ENST00000378076 HRCP23327 699 aa25.27■■□□□ 1.64
ITGA8-201ENST00000378076 LOC105371045A0A1W2PR82 267 aa25.2■■□□□ 1.62
ITGA8-201ENST00000378076 HNRNPUL2Q1KMD3 747 aaKnown RBP25.2■■□□□ 1.62
ITGA8-201ENST00000378076 SLC4A1APQ9BWU0 796 aaKnown RBP25.18■■□□□ 1.62
ITGA8-201ENST00000378076 BCANQ96GW7 911 aa25.12■■□□□ 1.61
ITGA8-201ENST00000378076 TRIM26Q12899 539 aaPredicted RBP25.11■■□□□ 1.61
ITGA8-201ENST00000378076 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.09■■□□□ 1.61
ITGA8-201ENST00000378076 ZNF316A6NFI3 1004 aaPredicted RBP24.98■■□□□ 1.59
ITGA8-201ENST00000378076 BCL11AQ9H165 835 aa24.94■■□□□ 1.58
ITGA8-201ENST00000378076 CLSPNQ9HAW4 1339 aa24.93■■□□□ 1.58
ITGA8-201ENST00000378076 RTL5Q5HYW3 569 aaPredicted RBP24.87■■□□□ 1.57
ITGA8-201ENST00000378076 DIEXFQ68CQ4 756 aaKnown RBP24.78■■□□□ 1.56
ITGA8-201ENST00000378076 GTF3C3Q9Y5Q9 886 aa24.68■■□□□ 1.54
ITGA8-201ENST00000378076 NEUROD1Q13562 356 aa24.67■■□□□ 1.54
ITGA8-201ENST00000378076 FAM50AQ14320 339 aaKnown RBP24.54■■□□□ 1.52
ITGA8-201ENST00000378076 SLC24A1O60721 1099 aa24.46■■□□□ 1.51
ITGA8-201ENST00000378076 ZNF326Q5BKZ1 582 aaKnown RBP24.46■■□□□ 1.51
ITGA8-201ENST00000378076 TRIM52Q96A61 297 aa24.43■■□□□ 1.5
ITGA8-201ENST00000378076 NPM2Q86SE8 214 aaKnown RBP24.36■■□□□ 1.49
ITGA8-201ENST00000378076 CDK11AQ9UQ88 783 aaPredicted RBP24.28■■□□□ 1.48
ITGA8-201ENST00000378076 EIF5BO60841 1220 aaKnown RBP24.23■■□□□ 1.47
ITGA8-201ENST00000378076 CANXP27824 592 aaKnown RBP24.15■■□□□ 1.46
ITGA8-201ENST00000378076 ANP32CO43423 234 aa24.12■■□□□ 1.45
ITGA8-201ENST00000378076 ARID3CA6NKF2 412 aa24.11■■□□□ 1.45
ITGA8-201ENST00000378076 ARXQ96QS3 562 aa24.09■■□□□ 1.45
ITGA8-201ENST00000378076 ZBTB47Q9UFB7 747 aaPredicted RBP24.07■■□□□ 1.44
ITGA8-201ENST00000378076 NBR1Q14596 966 aa23.98■■□□□ 1.43
ITGA8-201ENST00000378076 SALL2Q9Y467 1007 aaPredicted RBP23.91■■□□□ 1.42
ITGA8-201ENST00000378076 FKBP8Q14318 412 aa23.89■■□□□ 1.41
ITGA8-201ENST00000378076 ANP32AP39687 249 aaKnown RBP23.88■■□□□ 1.41
ITGA8-201ENST00000378076 ACIN1Q9UKV3 1341 aaKnown RBP23.87■■□□□ 1.41
ITGA8-201ENST00000378076 P3H3Q8IVL6 736 aa23.87■■□□□ 1.41
ITGA8-201ENST00000378076 PLPPR3Q6T4P5 718 aa23.83■■□□□ 1.41
ITGA8-201ENST00000378076 FBLN2P98095 1184 aa23.79■■□□□ 1.4
ITGA8-201ENST00000378076 IRX6P78412 446 aaPredicted RBP23.72■■□□□ 1.39
ITGA8-201ENST00000378076 PABPN1Q86U42 306 aaKnown RBP eCLIP23.7■■□□□ 1.38
ITGA8-201ENST00000378076 FAM9BQ8IZU0 186 aa23.67■■□□□ 1.38
ITGA8-201ENST00000378076 HSP90AA1P07900 732 aaKnown RBP23.65■■□□□ 1.38
ITGA8-201ENST00000378076 SENP3Q9H4L4 574 aaPredicted RBP23.65■■□□□ 1.38
ITGA8-201ENST00000378076 SENP3-EIF4A1A0A087X0R7 540 aa23.64■■□□□ 1.38
ITGA8-201ENST00000378076 ZNF777Q9ULD5 760 aaPredicted RBP23.63■■□□□ 1.37
ITGA8-201ENST00000378076 HNRNPUQ00839 825 aaKnown RBP eCLIP23.54■■□□□ 1.36
ITGA8-201ENST00000378076 NEFMP07197 916 aa23.52■■□□□ 1.36
ITGA8-201ENST00000378076 ANP32BQ92688 251 aaKnown RBP23.51■■□□□ 1.35
ITGA8-201ENST00000378076 DDX10Q13206 875 aaKnown RBP23.5■■□□□ 1.35
ITGA8-201ENST00000378076 HIRIP3Q9BW71 556 aaPredicted RBP23.5■■□□□ 1.35
ITGA8-201ENST00000378076 PLEKHG5O94827 1062 aa23.48■■□□□ 1.35
ITGA8-201ENST00000378076 TPRNQ4KMQ1 711 aa23.46■■□□□ 1.35
ITGA8-201ENST00000378076 CHGAP10645 457 aaKnown RBP23.46■■□□□ 1.35
ITGA8-201ENST00000378076 SCAF1Q9H7N4 1312 aaKnown RBP23.39■■□□□ 1.33
ITGA8-201ENST00000378076 RTN4Q9NQC3 1192 aaKnown RBP23.32■■□□□ 1.32
ITGA8-201ENST00000378076 CCDC136Q96JN2 1154 aa23.29■■□□□ 1.32
ITGA8-201ENST00000378076 UPF2Q9HAU5 1272 aaKnown RBP23.27■■□□□ 1.32
ITGA8-201ENST00000378076 CHIC2Q9UKJ5 165 aa23.23■■□□□ 1.31
ITGA8-201ENST00000378076 A0A0G2JS52 829 aa23.22■■□□□ 1.31
ITGA8-201ENST00000378076 GLIPR1L2Q4G1C9 344 aa23.22■■□□□ 1.31
ITGA8-201ENST00000378076 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.22■■□□□ 1.31
ITGA8-201ENST00000378076 ZBTB7CA1YPR0 619 aa23.21■■□□□ 1.31
ITGA8-201ENST00000378076 KDM2AQ9Y2K7 1162 aa23.21■■□□□ 1.31
ITGA8-201ENST00000378076 STAG3Q9UJ98 1225 aa23.17■■□□□ 1.3
ITGA8-201ENST00000378076 TULP1O00294 542 aaPredicted RBP23.17■■□□□ 1.3
ITGA8-201ENST00000378076 MIER1Q8N108 512 aa23.17■■□□□ 1.3
ITGA8-201ENST00000378076 TAOK2Q9UL54 1235 aa23.14■■□□□ 1.3
ITGA8-201ENST00000378076 ABCC9O60706 1549 aa23.14■■□□□ 1.29
ITGA8-201ENST00000378076 TONSLQ96HA7 1378 aa23.14■■□□□ 1.29
ITGA8-201ENST00000378076 TMC1Q8TDI8 760 aa23.12■■□□□ 1.29
ITGA8-201ENST00000378076 NCLP19338 710 aaKnown RBP23.06■■□□□ 1.28
ITGA8-201ENST00000378076 AMER1Q5JTC6 1135 aaPredicted RBP23.06■■□□□ 1.28
ITGA8-201ENST00000378076 MRS2Q9HD23 443 aa23.03■■□□□ 1.28
ITGA8-201ENST00000378076 WDR43Q15061 677 aaKnown RBP eCLIP23.02■■□□□ 1.28
ITGA8-201ENST00000378076 LAS1LQ9Y4W2 734 aaKnown RBP22.99■■□□□ 1.27
ITGA8-201ENST00000378076 ESF1Q9H501 851 aaKnown RBP22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms