RNA–Protein interactions for RNA: ENST00000375477.5

PCID2-205, Transcript of PCI domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCID2, Length 1,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCID2-205ENST00000375477 NISCHQ9Y2I1 1504 aa28.85■■■□□ 2.21
PCID2-205ENST00000375477 CCDC180Q9P1Z9 1646 aa24.92■■□□□ 1.58
PCID2-205ENST00000375477 ZCCHC6Q5VYS8 1495 aaKnown RBP24.44■■□□□ 1.5
PCID2-205ENST00000375477 DCAF1Q9Y4B6 1507 aa23.97■■□□□ 1.43
PCID2-205ENST00000375477 SHROOM4Q9ULL8 1493 aa23.88■■□□□ 1.41
PCID2-205ENST00000375477 MYO15BQ96JP2 1530 aa23.4■■□□□ 1.34
PCID2-205ENST00000375477 SUPT5HO00267 1087 aaKnown RBP23.35■■□□□ 1.33
PCID2-205ENST00000375477 DCAF8L2P0C7V8 631 aa23.23■■□□□ 1.31
PCID2-205ENST00000375477 ABCC9O60706 1549 aa23.08■■□□□ 1.29
PCID2-205ENST00000375477 NACADO15069 1562 aa22.94■■□□□ 1.26
PCID2-205ENST00000375477 CHIC1Q5VXU3 224 aa22.88■■□□□ 1.25
PCID2-205ENST00000375477 SCRIBQ14160 1630 aa22.86■■□□□ 1.25
PCID2-205ENST00000375477 RSF1Q96T23 1441 aaPredicted RBP22.65■■□□□ 1.22
PCID2-205ENST00000375477 RB1CC1Q8TDY2 1594 aa22.56■■□□□ 1.2
PCID2-205ENST00000375477 MROH2BQ7Z745 1585 aa22.28■■□□□ 1.16
PCID2-205ENST00000375477 CECR2Q9BXF3 1484 aa22.25■■□□□ 1.15
PCID2-205ENST00000375477 BAZ1AQ9NRL2 1556 aaPredicted RBP22.25■■□□□ 1.15
PCID2-205ENST00000375477 UNC13AQ9UPW8 1703 aa22.18■■□□□ 1.14
PCID2-205ENST00000375477 WIZO95785 1651 aa22.17■■□□□ 1.14
PCID2-205ENST00000375477 EIF4G1Q04637 1599 aaKnown RBP22.05■■□□□ 1.12
PCID2-205ENST00000375477 SMARCA4P51532 1647 aa22.04■■□□□ 1.12
PCID2-205ENST00000375477 TOP2AP11388 1531 aaKnown RBP22.01■■□□□ 1.11
PCID2-205ENST00000375477 HRCP23327 699 aa21.98■■□□□ 1.11
PCID2-205ENST00000375477 TRIM41Q8WV44 630 aa21.97■■□□□ 1.11
PCID2-205ENST00000375477 LOC105371045A0A1W2PR82 267 aa21.93■■□□□ 1.1
PCID2-205ENST00000375477 PCGF6Q9BYE7 350 aa21.83■■□□□ 1.09
PCID2-205ENST00000375477 BICRAQ9NZM4 1560 aa21.82■■□□□ 1.08
PCID2-205ENST00000375477 SMARCA2P51531 1590 aa21.81■■□□□ 1.08
PCID2-205ENST00000375477 PEG3Q9GZU2 1588 aa21.81■■□□□ 1.08
PCID2-205ENST00000375477 TRIM26Q12899 539 aaPredicted RBP21.73■■□□□ 1.07
PCID2-205ENST00000375477 CCDC88BA6NC98 1476 aa21.71■■□□□ 1.07
PCID2-205ENST00000375477 EEA1Q15075 1411 aa21.52■■□□□ 1.04
PCID2-205ENST00000375477 ABCC8Q09428 1581 aa21.51■■□□□ 1.03
PCID2-205ENST00000375477 FAM9AQ8IZU1 332 aaPredicted RBP21.48■■□□□ 1.03
PCID2-205ENST00000375477 ATAD2BQ9ULI0 1458 aa21.41■■□□□ 1.02
PCID2-205ENST00000375477 ZEB1P37275 1124 aaPredicted RBP21.37■■□□□ 1.01
PCID2-205ENST00000375477 WRNQ14191 1432 aaPredicted RBP eCLIP21.34■■□□□ 1.01
PCID2-205ENST00000375477 BAZ1BQ9UIG0 1483 aaKnown RBP21.34■■□□□ 1.01
PCID2-205ENST00000375477 PABPN1Q86U42 306 aaKnown RBP eCLIP21.33■■□□□ 12e-6■□□□□ 11.3
PCID2-205ENST00000375477 TNIKQ9UKE5 1360 aa21.27■■□□□ 1
PCID2-205ENST00000375477 HMGXB3Q12766 1538 aa21.24■□□□□ 0.99
PCID2-205ENST00000375477 SOGA1O94964 1423 aa21.23■□□□□ 0.99
PCID2-205ENST00000375477 KIF21BO75037 1637 aa21.23■□□□□ 0.99
PCID2-205ENST00000375477 SYNJ1O43426 1573 aa21.22■□□□□ 0.99
PCID2-205ENST00000375477 GOLGA3Q08378 1498 aa21.21■□□□□ 0.99
PCID2-205ENST00000375477 CEP162Q5TB80 1403 aa21.2■□□□□ 0.98
PCID2-205ENST00000375477 PPARGC1BQ86YN6 1023 aaKnown RBP21.17■□□□□ 0.98
PCID2-205ENST00000375477 CSRNP3Q8WYN3 585 aa21.14■□□□□ 0.97
PCID2-205ENST00000375477 CEP164Q9UPV0 1460 aa21.13■□□□□ 0.97
PCID2-205ENST00000375477 BIVM-ERCC5R4GMW8 1640 aa21.12■□□□□ 0.97
PCID2-205ENST00000375477 TOP2BQ02880 1626 aa21.12■□□□□ 0.97
PCID2-205ENST00000375477 NCAPD3P42695 1498 aa21.11■□□□□ 0.97
PCID2-205ENST00000375477 RUSC2Q8N2Y8 1516 aa21.08■□□□□ 0.97
PCID2-205ENST00000375477 EHMT2Q96KQ7 1210 aa21.05■□□□□ 0.96
PCID2-205ENST00000375477 PRDM2Q13029 1718 aa21.01■□□□□ 0.95
PCID2-205ENST00000375477 ERICH3Q5RHP9 1530 aa20.93■□□□□ 0.94
PCID2-205ENST00000375477 UBTFP17480 764 aaKnown RBP20.88■□□□□ 0.93
PCID2-205ENST00000375477 CFTRP13569 1480 aa20.87■□□□□ 0.93
PCID2-205ENST00000375477 CLIP1P30622 1438 aa20.83■□□□□ 0.93
PCID2-205ENST00000375477 VPS8Q8N3P4 1428 aa20.82■□□□□ 0.92
PCID2-205ENST00000375477 RAPGEF2Q9Y4G8 1499 aa20.81■□□□□ 0.92
PCID2-205ENST00000375477 CUX1P39880 1505 aa20.8■□□□□ 0.92
PCID2-205ENST00000375477 PRXQ9BXM0 1461 aa20.79■□□□□ 0.92
PCID2-205ENST00000375477 KIF27Q86VH2 1401 aa20.7■□□□□ 0.9
PCID2-205ENST00000375477 CCER1Q8TC90 406 aaPredicted RBP20.67■□□□□ 0.9
PCID2-205ENST00000375477 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.61■□□□□ 0.89
PCID2-205ENST00000375477 CADPSQ9ULU8 1353 aa20.58■□□□□ 0.88
PCID2-205ENST00000375477 ARAP1Q96P48 1450 aa20.56■□□□□ 0.88
PCID2-205ENST00000375477 CC2D2AQ9P2K1 1620 aa20.55■□□□□ 0.88
PCID2-205ENST00000375477 APLP2Q06481 763 aa20.51■□□□□ 0.87
PCID2-205ENST00000375477 CUX2O14529 1486 aa20.42■□□□□ 0.86
PCID2-205ENST00000375477 FGD5Q6ZNL6 1462 aa20.42■□□□□ 0.86
PCID2-205ENST00000375477 TTBK1Q5TCY1 1321 aaPredicted RBP20.42■□□□□ 0.86
PCID2-205ENST00000375477 MAP3K1Q13233 1512 aa20.42■□□□□ 0.86
PCID2-205ENST00000375477 DNMBPQ6XZF7 1577 aa20.41■□□□□ 0.86
PCID2-205ENST00000375477 ARHGAP35Q9NRY4 1499 aa20.4■□□□□ 0.86
PCID2-205ENST00000375477 FANCD2Q9BXW9 1451 aa20.37■□□□□ 0.85
PCID2-205ENST00000375477 IGF1RP08069 1367 aa20.37■□□□□ 0.85
PCID2-205ENST00000375477 RRBP1Q9P2E9 1410 aaKnown RBP20.36■□□□□ 0.85
PCID2-205ENST00000375477 CLSPNQ9HAW4 1339 aa20.34■□□□□ 0.85
PCID2-205ENST00000375477 CUL7Q14999 1698 aa20.33■□□□□ 0.84
PCID2-205ENST00000375477 ABCA10Q8WWZ4 1543 aa20.32■□□□□ 0.84
PCID2-205ENST00000375477 LAMC3Q9Y6N6 1575 aa20.32■□□□□ 0.84
PCID2-205ENST00000375477 CARMIL1Q5VZK9 1371 aa20.29■□□□□ 0.84
PCID2-205ENST00000375477 WDR97A6NE52 1622 aa20.28■□□□□ 0.84
PCID2-205ENST00000375477 TIAM1Q13009 1591 aa20.27■□□□□ 0.83
PCID2-205ENST00000375477 TOPBP1Q92547 1522 aa20.26■□□□□ 0.83
PCID2-205ENST00000375477 CFAP43Q8NDM7 1665 aa20.26■□□□□ 0.83
PCID2-205ENST00000375477 EFCAB5A4FU69 1503 aa20.24■□□□□ 0.83
PCID2-205ENST00000375477 CTTNBP2Q8WZ74 1663 aa20.23■□□□□ 0.83
PCID2-205ENST00000375477 FHAD1B1AJZ9 1412 aa20.23■□□□□ 0.83
PCID2-205ENST00000375477 HNRNPUL2Q1KMD3 747 aaKnown RBP20.22■□□□□ 0.83
PCID2-205ENST00000375477 DIEXFQ68CQ4 756 aaKnown RBP20.22■□□□□ 0.83
PCID2-205ENST00000375477 POLA1P09884 1462 aaPredicted RBP20.22■□□□□ 0.83
PCID2-205ENST00000375477 ZNF316A6NFI3 1004 aaPredicted RBP20.19■□□□□ 0.82
PCID2-205ENST00000375477 CCNB3Q8WWL7 1395 aa20.16■□□□□ 0.82
PCID2-205ENST00000375477 RANGAP1P46060 587 aaPredicted RBP20.16■□□□□ 0.82
PCID2-205ENST00000375477 KANK4Q5T7N3 995 aaPredicted RBP20.15■□□□□ 0.82
PCID2-205ENST00000375477 AQRO60306 1485 aaKnown RBP eCLIP20.15■□□□□ 0.826e-9■■■■■ 40.7
PCID2-205ENST00000375477 ABCA5Q8WWZ7 1642 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms