RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 DCAF8L2P0C7V8 631 aa26.36■■□□□ 1.81
NOTCH4-201ENST00000375023 EHMT2Q96KQ7 1210 aa24.48■■□□□ 1.51
NOTCH4-201ENST00000375023 SUPT5HO00267 1087 aaKnown RBP24.4■■□□□ 1.5
NOTCH4-201ENST00000375023 SHROOM4Q9ULL8 1493 aa23.97■■□□□ 1.43
NOTCH4-201ENST00000375023 TTBK1Q5TCY1 1321 aaPredicted RBP23.56■■□□□ 1.36
NOTCH4-201ENST00000375023 RANGAP1P46060 587 aaPredicted RBP23.3■■□□□ 1.32
NOTCH4-201ENST00000375023 FAM9AQ8IZU1 332 aaPredicted RBP23.27■■□□□ 1.32
NOTCH4-201ENST00000375023 APLP2Q06481 763 aa23.15■■□□□ 1.3
NOTCH4-201ENST00000375023 PELP1Q8IZL8 1130 aaKnown RBP23.12■■□□□ 1.29
NOTCH4-201ENST00000375023 ATP1B4Q9UN42 357 aaPredicted RBP23.12■■□□□ 1.29
NOTCH4-201ENST00000375023 CHIC1Q5VXU3 224 aa22.9■■□□□ 1.26
NOTCH4-201ENST00000375023 PCGF6Q9BYE7 350 aa22.9■■□□□ 1.26
NOTCH4-201ENST00000375023 MYT1LQ9UL68 1186 aa22.8■■□□□ 1.24
NOTCH4-201ENST00000375023 NISCHQ9Y2I1 1504 aa22.77■■□□□ 1.24
NOTCH4-201ENST00000375023 ERICH6Q7L0X2 663 aa22.65■■□□□ 1.22
NOTCH4-201ENST00000375023 YTHDC1Q96MU7 727 aaKnown RBP22.47■■□□□ 1.19
NOTCH4-201ENST00000375023 CCER1Q8TC90 406 aaPredicted RBP22.45■■□□□ 1.18
NOTCH4-201ENST00000375023 PPARGC1BQ86YN6 1023 aaKnown RBP22.43■■□□□ 1.18
NOTCH4-201ENST00000375023 UBTFP17480 764 aaKnown RBP22.27■■□□□ 1.15
NOTCH4-201ENST00000375023 TRIM41Q8WV44 630 aa22.26■■□□□ 1.15
NOTCH4-201ENST00000375023 CENPBP07199 599 aaPredicted RBP22.23■■□□□ 1.15
NOTCH4-201ENST00000375023 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.2■■□□□ 1.15
NOTCH4-201ENST00000375023 HNRNPUL2Q1KMD3 747 aaKnown RBP22.2■■□□□ 1.15
NOTCH4-201ENST00000375023 CNGB1Q14028 1251 aaPredicted RBP22.12■■□□□ 1.13
NOTCH4-201ENST00000375023 POLR3GLQ9BT43 218 aa22.07■■□□□ 1.12
NOTCH4-201ENST00000375023 SLC4A1APQ9BWU0 796 aaKnown RBP22.06■■□□□ 1.12
NOTCH4-201ENST00000375023 MYT1Q01538 1121 aa22.04■■□□□ 1.12
NOTCH4-201ENST00000375023 NEFLP07196 543 aa22.01■■□□□ 1.11
NOTCH4-201ENST00000375023 ITGAEP38570 1179 aa21.99■■□□□ 1.11
NOTCH4-201ENST00000375023 PLPPR3Q6T4P5 718 aa21.93■■□□□ 1.1
NOTCH4-201ENST00000375023 ZEB1P37275 1124 aaPredicted RBP21.85■■□□□ 1.09
NOTCH4-201ENST00000375023 SLC24A1O60721 1099 aa21.61■■□□□ 1.05
NOTCH4-201ENST00000375023 DAXXQ9UER7 740 aaPredicted RBP21.59■■□□□ 1.05
NOTCH4-201ENST00000375023 BCANQ96GW7 911 aa21.54■■□□□ 1.04
NOTCH4-201ENST00000375023 LOC105371045A0A1W2PR82 267 aa21.48■■□□□ 1.03
NOTCH4-201ENST00000375023 BCL11AQ9H165 835 aa21.45■■□□□ 1.02
NOTCH4-201ENST00000375023 FBLN2P98095 1184 aa21.43■■□□□ 1.02
NOTCH4-201ENST00000375023 TRIM26Q12899 539 aaPredicted RBP21.34■■□□□ 1.01
NOTCH4-201ENST00000375023 HRCP23327 699 aa21.3■■□□□ 1
NOTCH4-201ENST00000375023 CLSPNQ9HAW4 1339 aa21.24■□□□□ 0.99
NOTCH4-201ENST00000375023 FAM50AQ14320 339 aaKnown RBP21.14■□□□□ 0.97
NOTCH4-201ENST00000375023 ZNF316A6NFI3 1004 aaPredicted RBP21.12■□□□□ 0.97
NOTCH4-201ENST00000375023 A0A0G2JS52 829 aa21.12■□□□□ 0.97
NOTCH4-201ENST00000375023 NEUROD1Q13562 356 aa21.1■□□□□ 0.97
NOTCH4-201ENST00000375023 PLEKHG5O94827 1062 aa21.1■□□□□ 0.97
NOTCH4-201ENST00000375023 TRIM52Q96A61 297 aa21.07■□□□□ 0.96
NOTCH4-201ENST00000375023 ARID3CA6NKF2 412 aa21.05■□□□□ 0.96
NOTCH4-201ENST00000375023 ZNF326Q5BKZ1 582 aaKnown RBP21.05■□□□□ 0.96
NOTCH4-201ENST00000375023 SCAF1Q9H7N4 1312 aaKnown RBP21.03■□□□□ 0.96
NOTCH4-201ENST00000375023 PABPN1Q86U42 306 aaKnown RBP eCLIP21.02■□□□□ 0.96
NOTCH4-201ENST00000375023 SENP3Q9H4L4 574 aaPredicted RBP21■□□□□ 0.95
NOTCH4-201ENST00000375023 RTL5Q5HYW3 569 aaPredicted RBP20.93■□□□□ 0.94
NOTCH4-201ENST00000375023 DIEXFQ68CQ4 756 aaKnown RBP20.92■□□□□ 0.94
NOTCH4-201ENST00000375023 ESF1Q9H501 851 aaKnown RBP20.85■□□□□ 0.93
NOTCH4-201ENST00000375023 P3H3Q8IVL6 736 aa20.68■□□□□ 0.9
NOTCH4-201ENST00000375023 STAG3Q9UJ98 1225 aa20.67■□□□□ 0.9
NOTCH4-201ENST00000375023 ZBTB7CA1YPR0 619 aa20.67■□□□□ 0.9
NOTCH4-201ENST00000375023 ZBTB47Q9UFB7 747 aaPredicted RBP20.66■□□□□ 0.9
NOTCH4-201ENST00000375023 CANXP27824 592 aaKnown RBP20.65■□□□□ 0.9
NOTCH4-201ENST00000375023 CHGAP10645 457 aaKnown RBP20.62■□□□□ 0.89
NOTCH4-201ENST00000375023 GTF3C3Q9Y5Q9 886 aa20.62■□□□□ 0.89
NOTCH4-201ENST00000375023 ANP32CO43423 234 aa20.57■□□□□ 0.88
NOTCH4-201ENST00000375023 ZNF777Q9ULD5 760 aaPredicted RBP20.53■□□□□ 0.88
NOTCH4-201ENST00000375023 NPM2Q86SE8 214 aaKnown RBP20.53■□□□□ 0.88
NOTCH4-201ENST00000375023 ABCC9O60706 1549 aa20.49■□□□□ 0.87
NOTCH4-201ENST00000375023 CDK11AQ9UQ88 783 aaPredicted RBP20.49■□□□□ 0.87
NOTCH4-201ENST00000375023 SALL2Q9Y467 1007 aaPredicted RBP20.38■□□□□ 0.85
NOTCH4-201ENST00000375023 C14orf37Q86TY3 774 aa20.37■□□□□ 0.85
NOTCH4-201ENST00000375023 NPM1P06748 294 aaKnown RBP eCLIP20.36■□□□□ 0.85
NOTCH4-201ENST00000375023 TRHP20396 242 aaPredicted RBP20.36■□□□□ 0.85
NOTCH4-201ENST00000375023 NEFMP07197 916 aa20.35■□□□□ 0.85
NOTCH4-201ENST00000375023 TULP1O00294 542 aaPredicted RBP20.34■□□□□ 0.85
NOTCH4-201ENST00000375023 HAP1P54257 671 aaPredicted RBP20.31■□□□□ 0.84
NOTCH4-201ENST00000375023 ARXQ96QS3 562 aa20.27■□□□□ 0.84
NOTCH4-201ENST00000375023 ARID4BQ4LE39 1312 aaPredicted RBP20.25■□□□□ 0.83
NOTCH4-201ENST00000375023 NCBP3Q53F19 620 aaKnown RBP20.17■□□□□ 0.82
NOTCH4-201ENST00000375023 ANP32AP39687 249 aaKnown RBP20.16■□□□□ 0.82
NOTCH4-201ENST00000375023 FAM9BQ8IZU0 186 aa20.15■□□□□ 0.82
NOTCH4-201ENST00000375023 EIF5BO60841 1220 aaKnown RBP20.15■□□□□ 0.82
NOTCH4-201ENST00000375023 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.13■□□□□ 0.81
NOTCH4-201ENST00000375023 HSP90AA1P07900 732 aaKnown RBP20.13■□□□□ 0.81
NOTCH4-201ENST00000375023 FKBP8Q14318 412 aa20.12■□□□□ 0.81
NOTCH4-201ENST00000375023 CHIC2Q9UKJ5 165 aa20.06■□□□□ 0.8
NOTCH4-201ENST00000375023 SENP3-EIF4A1A0A087X0R7 540 aa20.05■□□□□ 0.8
NOTCH4-201ENST00000375023 NPHP1O15259 732 aa20.04■□□□□ 0.8
NOTCH4-201ENST00000375023 NBR1Q14596 966 aa20.02■□□□□ 0.8
NOTCH4-201ENST00000375023 HNRNPUQ00839 825 aaKnown RBP eCLIP20.02■□□□□ 0.8
NOTCH4-201ENST00000375023 DDX10Q13206 875 aaKnown RBP20.02■□□□□ 0.8
NOTCH4-201ENST00000375023 LMOD2Q6P5Q4 547 aa20.02■□□□□ 0.8
NOTCH4-201ENST00000375023 HIRIP3Q9BW71 556 aaPredicted RBP20■□□□□ 0.79
NOTCH4-201ENST00000375023 IRX6P78412 446 aaPredicted RBP20■□□□□ 0.79
NOTCH4-201ENST00000375023 KDM2AQ9Y2K7 1162 aa19.99■□□□□ 0.79
NOTCH4-201ENST00000375023 ACIN1Q9UKV3 1341 aaKnown RBP19.97■□□□□ 0.79
NOTCH4-201ENST00000375023 AEBP2Q6ZN18 517 aaPredicted RBP19.94■□□□□ 0.78
NOTCH4-201ENST00000375023 TAOK2Q9UL54 1235 aa19.91■□□□□ 0.78
NOTCH4-201ENST00000375023 ANP32BQ92688 251 aaKnown RBP19.9■□□□□ 0.78
NOTCH4-201ENST00000375023 TONSLQ96HA7 1378 aa19.89■□□□□ 0.77
NOTCH4-201ENST00000375023 KCNH8Q96L42 1107 aa19.88■□□□□ 0.77
NOTCH4-201ENST00000375023 PPP1R15AO75807 674 aaPredicted RBP19.87■□□□□ 0.77
NOTCH4-201ENST00000375023 CSRNP3Q8WYN3 585 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms