RNA–Protein interactions for RNA: ENST00000373115.4

CHST3-201, Transcript of carbohydrate sulfotransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHST3, Length 6,970 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHST3-201ENST00000373115 DCAF8L2P0C7V8 631 aa26.57■■□□□ 1.84
CHST3-201ENST00000373115 SUPT5HO00267 1087 aaKnown RBP25.33■■□□□ 1.64
CHST3-201ENST00000373115 EHMT2Q96KQ7 1210 aa25.18■■□□□ 1.62
CHST3-201ENST00000373115 PELP1Q8IZL8 1130 aaKnown RBP25.11■■□□□ 1.61
CHST3-201ENST00000373115 SHROOM4Q9ULL8 1493 aa24.69■■□□□ 1.54
CHST3-201ENST00000373115 ERICH6Q7L0X2 663 aa24.39■■□□□ 1.49
CHST3-201ENST00000373115 TTBK1Q5TCY1 1321 aaPredicted RBP24.36■■□□□ 1.49
CHST3-201ENST00000373115 APLP2Q06481 763 aa24.34■■□□□ 1.49
CHST3-201ENST00000373115 PCGF6Q9BYE7 350 aa24.1■■□□□ 1.45
CHST3-201ENST00000373115 FAM9AQ8IZU1 332 aaPredicted RBP24.09■■□□□ 1.45
CHST3-201ENST00000373115 CCER1Q8TC90 406 aaPredicted RBP23.99■■□□□ 1.43
CHST3-201ENST00000373115 CENPBP07199 599 aaPredicted RBP23.97■■□□□ 1.43
CHST3-201ENST00000373115 RANGAP1P46060 587 aaPredicted RBP23.86■■□□□ 1.41
CHST3-201ENST00000373115 YTHDC1Q96MU7 727 aaKnown RBP23.72■■□□□ 1.39
CHST3-201ENST00000373115 ATP1B4Q9UN42 357 aaPredicted RBP23.63■■□□□ 1.37
CHST3-201ENST00000373115 NISCHQ9Y2I1 1504 aa23.59■■□□□ 1.37
CHST3-201ENST00000373115 NEFLP07196 543 aa23.57■■□□□ 1.36
CHST3-201ENST00000373115 MYT1Q01538 1121 aa23.57■■□□□ 1.36
CHST3-201ENST00000373115 ZEB1P37275 1124 aaPredicted RBP23.54■■□□□ 1.36
CHST3-201ENST00000373115 TRIM41Q8WV44 630 aa23.25■■□□□ 1.31
CHST3-201ENST00000373115 PPARGC1BQ86YN6 1023 aaKnown RBP23.21■■□□□ 1.31
CHST3-201ENST00000373115 UBTFP17480 764 aaKnown RBP23.2■■□□□ 1.3
CHST3-201ENST00000373115 DAXXQ9UER7 740 aaPredicted RBP23.13■■□□□ 1.29
CHST3-201ENST00000373115 POLR3GLQ9BT43 218 aa22.99■■□□□ 1.27
CHST3-201ENST00000373115 CNGB1Q14028 1251 aaPredicted RBP22.91■■□□□ 1.26
CHST3-201ENST00000373115 ITGAEP38570 1179 aa22.8■■□□□ 1.24
CHST3-201ENST00000373115 HRCP23327 699 aa22.71■■□□□ 1.23
CHST3-201ENST00000373115 MYT1LQ9UL68 1186 aa22.71■■□□□ 1.23
CHST3-201ENST00000373115 TRIM26Q12899 539 aaPredicted RBP22.7■■□□□ 1.22
CHST3-201ENST00000373115 ZNF316A6NFI3 1004 aaPredicted RBP22.6■■□□□ 1.21
CHST3-201ENST00000373115 RTL5Q5HYW3 569 aaPredicted RBP22.58■■□□□ 1.2
CHST3-201ENST00000373115 CHIC1Q5VXU3 224 aa22.57■■□□□ 1.2
CHST3-201ENST00000373115 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.54■■□□□ 1.2
CHST3-201ENST00000373115 HNRNPUL2Q1KMD3 747 aaKnown RBP22.54■■□□□ 1.2
CHST3-201ENST00000373115 SLC4A1APQ9BWU0 796 aaKnown RBP22.54■■□□□ 1.2
CHST3-201ENST00000373115 CLSPNQ9HAW4 1339 aa22.51■■□□□ 1.19
CHST3-201ENST00000373115 LOC105371045A0A1W2PR82 267 aa22.36■■□□□ 1.17
CHST3-201ENST00000373115 BCANQ96GW7 911 aa22.3■■□□□ 1.16
CHST3-201ENST00000373115 DIEXFQ68CQ4 756 aaKnown RBP22.28■■□□□ 1.16
CHST3-201ENST00000373115 BCL11AQ9H165 835 aa22.08■■□□□ 1.13
CHST3-201ENST00000373115 GTF3C3Q9Y5Q9 886 aa22.06■■□□□ 1.12
CHST3-201ENST00000373115 NEUROD1Q13562 356 aa22.03■■□□□ 1.12
CHST3-201ENST00000373115 FAM50AQ14320 339 aaKnown RBP22.02■■□□□ 1.11
CHST3-201ENST00000373115 CDK11AQ9UQ88 783 aaPredicted RBP21.99■■□□□ 1.11
CHST3-201ENST00000373115 TRIM52Q96A61 297 aa21.96■■□□□ 1.11
CHST3-201ENST00000373115 ZBTB47Q9UFB7 747 aaPredicted RBP21.91■■□□□ 1.1
CHST3-201ENST00000373115 SLC24A1O60721 1099 aa21.88■■□□□ 1.09
CHST3-201ENST00000373115 ZNF326Q5BKZ1 582 aaKnown RBP21.86■■□□□ 1.09
CHST3-201ENST00000373115 ANP32CO43423 234 aa21.83■■□□□ 1.09
CHST3-201ENST00000373115 CANXP27824 592 aaKnown RBP21.8■■□□□ 1.08
CHST3-201ENST00000373115 NPM2Q86SE8 214 aaKnown RBP21.75■■□□□ 1.07
CHST3-201ENST00000373115 EIF5BO60841 1220 aaKnown RBP21.73■■□□□ 1.07
CHST3-201ENST00000373115 ANP32AP39687 249 aaKnown RBP21.66■■□□□ 1.06
CHST3-201ENST00000373115 ACIN1Q9UKV3 1341 aaKnown RBP21.48■■□□□ 1.03
CHST3-201ENST00000373115 NEFMP07197 916 aa21.47■■□□□ 1.03
CHST3-201ENST00000373115 ANP32BQ92688 251 aaKnown RBP21.45■■□□□ 1.03
CHST3-201ENST00000373115 HSP90AA1P07900 732 aaKnown RBP21.41■■□□□ 1.02
CHST3-201ENST00000373115 FKBP8Q14318 412 aa21.4■■□□□ 1.02
CHST3-201ENST00000373115 ARXQ96QS3 562 aa21.37■■□□□ 1.01
CHST3-201ENST00000373115 NBR1Q14596 966 aa21.36■■□□□ 1.01
CHST3-201ENST00000373115 ARID3CA6NKF2 412 aa21.33■■□□□ 1.01
CHST3-201ENST00000373115 FBLN2P98095 1184 aa21.29■■□□□ 1
CHST3-201ENST00000373115 GLIPR1L2Q4G1C9 344 aa21.26■□□□□ 0.99
CHST3-201ENST00000373115 SALL2Q9Y467 1007 aaPredicted RBP21.25■□□□□ 0.99
CHST3-201ENST00000373115 P3H3Q8IVL6 736 aa21.24■□□□□ 0.99
CHST3-201ENST00000373115 UPF2Q9HAU5 1272 aaKnown RBP21.21■□□□□ 0.99
CHST3-201ENST00000373115 FAM9BQ8IZU0 186 aa21.19■□□□□ 0.98
CHST3-201ENST00000373115 HNRNPUQ00839 825 aaKnown RBP eCLIP21.17■□□□□ 0.98
CHST3-201ENST00000373115 ZNF777Q9ULD5 760 aaPredicted RBP21.17■□□□□ 0.98
CHST3-201ENST00000373115 PABPN1Q86U42 306 aaKnown RBP eCLIP21.11■□□□□ 0.97
CHST3-201ENST00000373115 PLPPR3Q6T4P5 718 aa21.06■□□□□ 0.96
CHST3-201ENST00000373115 DDX10Q13206 875 aaKnown RBP21.05■□□□□ 0.96
CHST3-201ENST00000373115 CCDC136Q96JN2 1154 aa21.04■□□□□ 0.96
CHST3-201ENST00000373115 CHGAP10645 457 aaKnown RBP21.04■□□□□ 0.96
CHST3-201ENST00000373115 IRX6P78412 446 aaPredicted RBP21.01■□□□□ 0.95
CHST3-201ENST00000373115 TONSLQ96HA7 1378 aa20.96■□□□□ 0.95
CHST3-201ENST00000373115 STAG3Q9UJ98 1225 aa20.93■□□□□ 0.94
CHST3-201ENST00000373115 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.92■□□□□ 0.94
CHST3-201ENST00000373115 TMC1Q8TDI8 760 aa20.9■□□□□ 0.94
CHST3-201ENST00000373115 ESF1Q9H501 851 aaKnown RBP20.86■□□□□ 0.93
CHST3-201ENST00000373115 WDR43Q15061 677 aaKnown RBP eCLIP20.84■□□□□ 0.93
CHST3-201ENST00000373115 CDK11BP21127 795 aaKnown RBP20.83■□□□□ 0.93
CHST3-201ENST00000373115 SCAF1Q9H7N4 1312 aaKnown RBP20.79■□□□□ 0.92
CHST3-201ENST00000373115 TRIM44Q96DX7 344 aaPredicted RBP20.78■□□□□ 0.92
CHST3-201ENST00000373115 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.78■□□□□ 0.92
CHST3-201ENST00000373115 TPRNQ4KMQ1 711 aa20.77■□□□□ 0.92
CHST3-201ENST00000373115 HIRIP3Q9BW71 556 aaPredicted RBP20.77■□□□□ 0.92
CHST3-201ENST00000373115 MRS2Q9HD23 443 aa20.77■□□□□ 0.92
CHST3-201ENST00000373115 KDM2AQ9Y2K7 1162 aa20.75■□□□□ 0.91
CHST3-201ENST00000373115 CHIC2Q9UKJ5 165 aa20.74■□□□□ 0.91
CHST3-201ENST00000373115 A0A0G2JS52 829 aa20.73■□□□□ 0.91
CHST3-201ENST00000373115 CSRNP3Q8WYN3 585 aa20.73■□□□□ 0.91
CHST3-201ENST00000373115 MYH16Q9H6N6 1097 aa20.73■□□□□ 0.91
CHST3-201ENST00000373115 SENP3Q9H4L4 574 aaPredicted RBP20.73■□□□□ 0.91
CHST3-201ENST00000373115 ABCC9O60706 1549 aa20.72■□□□□ 0.91
CHST3-201ENST00000373115 NCLP19338 710 aaKnown RBP20.72■□□□□ 0.91
CHST3-201ENST00000373115 PLEKHG5O94827 1062 aa20.71■□□□□ 0.91
CHST3-201ENST00000373115 SENP3-EIF4A1A0A087X0R7 540 aa20.7■□□□□ 0.9
CHST3-201ENST00000373115 MIER1Q8N108 512 aa20.69■□□□□ 0.9
CHST3-201ENST00000373115 ZBTB7CA1YPR0 619 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms