RNA–Protein interactions for RNA: ENST00000373109.6

SPOCK2-202, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SPOCK2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK2-202ENST00000373109 DCAF8L2P0C7V8 631 aa26.36■■□□□ 1.81
SPOCK2-202ENST00000373109 SUPT5HO00267 1087 aaKnown RBP25.45■■□□□ 1.66
SPOCK2-202ENST00000373109 NISCHQ9Y2I1 1504 aa25.12■■□□□ 1.61
SPOCK2-202ENST00000373109 PELP1Q8IZL8 1130 aaKnown RBP24.95■■□□□ 1.58
SPOCK2-202ENST00000373109 EHMT2Q96KQ7 1210 aa24.94■■□□□ 1.58
SPOCK2-202ENST00000373109 SHROOM4Q9ULL8 1493 aa24.71■■□□□ 1.55
SPOCK2-202ENST00000373109 PCGF6Q9BYE7 350 aa24.32■■□□□ 1.48
SPOCK2-202ENST00000373109 APLP2Q06481 763 aa24.2■■□□□ 1.46
SPOCK2-202ENST00000373109 TTBK1Q5TCY1 1321 aaPredicted RBP24.17■■□□□ 1.46
SPOCK2-202ENST00000373109 FAM9AQ8IZU1 332 aaPredicted RBP24.11■■□□□ 1.45
SPOCK2-202ENST00000373109 ERICH6Q7L0X2 663 aa24.08■■□□□ 1.45
SPOCK2-202ENST00000373109 CENPBP07199 599 aaPredicted RBP24.06■■□□□ 1.44
SPOCK2-202ENST00000373109 CCER1Q8TC90 406 aaPredicted RBP23.81■■□□□ 1.4
SPOCK2-202ENST00000373109 ZEB1P37275 1124 aaPredicted RBP23.75■■□□□ 1.39
SPOCK2-202ENST00000373109 YTHDC1Q96MU7 727 aaKnown RBP23.65■■□□□ 1.38
SPOCK2-202ENST00000373109 MYT1Q01538 1121 aa23.62■■□□□ 1.37
SPOCK2-202ENST00000373109 RANGAP1P46060 587 aaPredicted RBP23.62■■□□□ 1.37
SPOCK2-202ENST00000373109 NEFLP07196 543 aa23.48■■□□□ 1.35
SPOCK2-202ENST00000373109 TRIM41Q8WV44 630 aa23.38■■□□□ 1.33
SPOCK2-202ENST00000373109 ATP1B4Q9UN42 357 aaPredicted RBP23.3■■□□□ 1.32
SPOCK2-202ENST00000373109 PPARGC1BQ86YN6 1023 aaKnown RBP23.21■■□□□ 1.31
SPOCK2-202ENST00000373109 UBTFP17480 764 aaKnown RBP23.18■■□□□ 1.3
SPOCK2-202ENST00000373109 HRCP23327 699 aa23.05■■□□□ 1.28
SPOCK2-202ENST00000373109 TRIM26Q12899 539 aaPredicted RBP22.97■■□□□ 1.27
SPOCK2-202ENST00000373109 DAXXQ9UER7 740 aaPredicted RBP22.86■■□□□ 1.25
SPOCK2-202ENST00000373109 POLR3GLQ9BT43 218 aa22.71■■□□□ 1.23
SPOCK2-202ENST00000373109 ITGAEP38570 1179 aa22.7■■□□□ 1.22
SPOCK2-202ENST00000373109 CNGB1Q14028 1251 aaPredicted RBP22.65■■□□□ 1.22
SPOCK2-202ENST00000373109 LOC105371045A0A1W2PR82 267 aa22.64■■□□□ 1.21
SPOCK2-202ENST00000373109 HNRNPUL2Q1KMD3 747 aaKnown RBP22.58■■□□□ 1.21
SPOCK2-202ENST00000373109 RTL5Q5HYW3 569 aaPredicted RBP22.5■■□□□ 1.19
SPOCK2-202ENST00000373109 DIEXFQ68CQ4 756 aaKnown RBP22.48■■□□□ 1.19
SPOCK2-202ENST00000373109 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.44■■□□□ 1.18
SPOCK2-202ENST00000373109 CHIC1Q5VXU3 224 aa22.37■■□□□ 1.17
SPOCK2-202ENST00000373109 ZNF316A6NFI3 1004 aaPredicted RBP22.34■■□□□ 1.17
SPOCK2-202ENST00000373109 GTF3C3Q9Y5Q9 886 aa22.31■■□□□ 1.16
SPOCK2-202ENST00000373109 BCANQ96GW7 911 aa22.3■■□□□ 1.16
SPOCK2-202ENST00000373109 CLSPNQ9HAW4 1339 aa22.29■■□□□ 1.16
SPOCK2-202ENST00000373109 MYT1LQ9UL68 1186 aa22.24■■□□□ 1.15
SPOCK2-202ENST00000373109 SLC4A1APQ9BWU0 796 aaKnown RBP22.1■■□□□ 1.13
SPOCK2-202ENST00000373109 CDK11AQ9UQ88 783 aaPredicted RBP21.98■■□□□ 1.11
SPOCK2-202ENST00000373109 NEUROD1Q13562 356 aa21.96■■□□□ 1.11
SPOCK2-202ENST00000373109 FAM50AQ14320 339 aaKnown RBP21.92■■□□□ 1.1
SPOCK2-202ENST00000373109 ACIN1Q9UKV3 1341 aaKnown RBP21.85■■□□□ 1.09
SPOCK2-202ENST00000373109 ANP32CO43423 234 aa21.85■■□□□ 1.09
SPOCK2-202ENST00000373109 TRIM52Q96A61 297 aa21.83■■□□□ 1.09
SPOCK2-202ENST00000373109 ZNF326Q5BKZ1 582 aaKnown RBP21.73■■□□□ 1.07
SPOCK2-202ENST00000373109 BCL11AQ9H165 835 aa21.7■■□□□ 1.06
SPOCK2-202ENST00000373109 EIF5BO60841 1220 aaKnown RBP21.68■■□□□ 1.06
SPOCK2-202ENST00000373109 ANP32AP39687 249 aaKnown RBP21.64■■□□□ 1.05
SPOCK2-202ENST00000373109 NPM2Q86SE8 214 aaKnown RBP21.63■■□□□ 1.05
SPOCK2-202ENST00000373109 ZBTB47Q9UFB7 747 aaPredicted RBP21.62■■□□□ 1.05
SPOCK2-202ENST00000373109 CANXP27824 592 aaKnown RBP21.57■■□□□ 1.04
SPOCK2-202ENST00000373109 FKBP8Q14318 412 aa21.51■■□□□ 1.03
SPOCK2-202ENST00000373109 ABCC9O60706 1549 aa21.49■■□□□ 1.03
SPOCK2-202ENST00000373109 SLC24A1O60721 1099 aa21.38■■□□□ 1.01
SPOCK2-202ENST00000373109 NBR1Q14596 966 aa21.32■■□□□ 1
SPOCK2-202ENST00000373109 HNRNPUQ00839 825 aaKnown RBP eCLIP21.28■■□□□ 1
SPOCK2-202ENST00000373109 PABPN1Q86U42 306 aaKnown RBP eCLIP21.27■■□□□ 1
SPOCK2-202ENST00000373109 ANP32BQ92688 251 aaKnown RBP21.27■■□□□ 1
SPOCK2-202ENST00000373109 NEFMP07197 916 aa21.23■□□□□ 0.99
SPOCK2-202ENST00000373109 HSP90AA1P07900 732 aaKnown RBP21.23■□□□□ 0.99
SPOCK2-202ENST00000373109 SCAF1Q9H7N4 1312 aaKnown RBP21.22■□□□□ 0.99
SPOCK2-202ENST00000373109 DDX10Q13206 875 aaKnown RBP21.2■□□□□ 0.98
SPOCK2-202ENST00000373109 GLIPR1L2Q4G1C9 344 aa21.2■□□□□ 0.98
SPOCK2-202ENST00000373109 P3H3Q8IVL6 736 aa21.2■□□□□ 0.98
SPOCK2-202ENST00000373109 FAM9BQ8IZU0 186 aa21.2■□□□□ 0.98
SPOCK2-202ENST00000373109 ARXQ96QS3 562 aa21.19■□□□□ 0.98
SPOCK2-202ENST00000373109 ARID3CA6NKF2 412 aa21.19■□□□□ 0.98
SPOCK2-202ENST00000373109 SALL2Q9Y467 1007 aaPredicted RBP21.16■□□□□ 0.98
SPOCK2-202ENST00000373109 UPF2Q9HAU5 1272 aaKnown RBP21.12■□□□□ 0.97
SPOCK2-202ENST00000373109 CCDC136Q96JN2 1154 aa21.11■□□□□ 0.97
SPOCK2-202ENST00000373109 CCDC180Q9P1Z9 1646 aa21.07■□□□□ 0.96
SPOCK2-202ENST00000373109 CSRNP3Q8WYN3 585 aa21.07■□□□□ 0.96
SPOCK2-202ENST00000373109 IRX6P78412 446 aaPredicted RBP21.06■□□□□ 0.96
SPOCK2-202ENST00000373109 FBLN2P98095 1184 aa21.05■□□□□ 0.96
SPOCK2-202ENST00000373109 TONSLQ96HA7 1378 aa21.04■□□□□ 0.96
SPOCK2-202ENST00000373109 ZNF777Q9ULD5 760 aaPredicted RBP21.03■□□□□ 0.96
SPOCK2-202ENST00000373109 MIER1Q8N108 512 aa21■□□□□ 0.95
SPOCK2-202ENST00000373109 TMC1Q8TDI8 760 aa20.93■□□□□ 0.94
SPOCK2-202ENST00000373109 MRS2Q9HD23 443 aa20.9■□□□□ 0.94
SPOCK2-202ENST00000373109 ZCCHC6Q5VYS8 1495 aaKnown RBP20.89■□□□□ 0.94
SPOCK2-202ENST00000373109 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.89■□□□□ 0.93
SPOCK2-202ENST00000373109 HIRIP3Q9BW71 556 aaPredicted RBP20.86■□□□□ 0.93
SPOCK2-202ENST00000373109 DCAF1Q9Y4B6 1507 aa20.8■□□□□ 0.92
SPOCK2-202ENST00000373109 CHGAP10645 457 aaKnown RBP20.8■□□□□ 0.92
SPOCK2-202ENST00000373109 ANP32EQ9BTT0 268 aa20.79■□□□□ 0.92
SPOCK2-202ENST00000373109 CHIC2Q9UKJ5 165 aa20.75■□□□□ 0.91
SPOCK2-202ENST00000373109 WDR43Q15061 677 aaKnown RBP eCLIP20.75■□□□□ 0.91
SPOCK2-202ENST00000373109 TRIM44Q96DX7 344 aaPredicted RBP20.69■□□□□ 0.9
SPOCK2-202ENST00000373109 SENP3-EIF4A1A0A087X0R7 540 aa20.68■□□□□ 0.9
SPOCK2-202ENST00000373109 RTN4Q9NQC3 1192 aaKnown RBP20.68■□□□□ 0.9
SPOCK2-202ENST00000373109 KDM2AQ9Y2K7 1162 aa20.67■□□□□ 0.9
SPOCK2-202ENST00000373109 DDRGK1Q96HY6 314 aa20.64■□□□□ 0.89
SPOCK2-202ENST00000373109 BECN1Q14457 450 aa20.62■□□□□ 0.89
SPOCK2-202ENST00000373109 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.61■□□□□ 0.89
SPOCK2-202ENST00000373109 STAG3Q9UJ98 1225 aa20.61■□□□□ 0.89
SPOCK2-202ENST00000373109 NPM1P06748 294 aaKnown RBP eCLIP20.6■□□□□ 0.89
SPOCK2-202ENST00000373109 SUPT16HQ9Y5B9 1047 aaKnown RBP20.59■□□□□ 0.89
SPOCK2-202ENST00000373109 LAS1LQ9Y4W2 734 aaKnown RBP20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms