RNA–Protein interactions for RNA: ENST00000372771.4

RLF-201, Transcript of rearranged L-myc fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RLF, Length 6,246 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLF-201ENST00000372771 DCAF8L2P0C7V8 631 aa26.06■■□□□ 1.76
RLF-201ENST00000372771 NISCHQ9Y2I1 1504 aa25.02■■□□□ 1.6
RLF-201ENST00000372771 SUPT5HO00267 1087 aaKnown RBP24.92■■□□□ 1.58
RLF-201ENST00000372771 SHROOM4Q9ULL8 1493 aa24.63■■□□□ 1.53
RLF-201ENST00000372771 EHMT2Q96KQ7 1210 aa24.28■■□□□ 1.48
RLF-201ENST00000372771 FAM9AQ8IZU1 332 aaPredicted RBP23.54■■□□□ 1.36
RLF-201ENST00000372771 TTBK1Q5TCY1 1321 aaPredicted RBP23.44■■□□□ 1.34
RLF-201ENST00000372771 PCGF6Q9BYE7 350 aa23.34■■□□□ 1.33
RLF-201ENST00000372771 APLP2Q06481 763 aa23.3■■□□□ 1.32
RLF-201ENST00000372771 RANGAP1P46060 587 aaPredicted RBP23.1■■□□□ 1.29
RLF-201ENST00000372771 PELP1Q8IZL8 1130 aaKnown RBP23.01■■□□□ 1.27
RLF-201ENST00000372771 TRIM41Q8WV44 630 aa22.95■■□□□ 1.26
RLF-201ENST00000372771 CCER1Q8TC90 406 aaPredicted RBP22.77■■□□□ 1.24
RLF-201ENST00000372771 ATP1B4Q9UN42 357 aaPredicted RBP22.71■■□□□ 1.23
RLF-201ENST00000372771 UBTFP17480 764 aaKnown RBP22.65■■□□□ 1.22
RLF-201ENST00000372771 PPARGC1BQ86YN6 1023 aaKnown RBP22.65■■□□□ 1.22
RLF-201ENST00000372771 ZEB1P37275 1124 aaPredicted RBP22.59■■□□□ 1.21
RLF-201ENST00000372771 CENPBP07199 599 aaPredicted RBP22.53■■□□□ 1.2
RLF-201ENST00000372771 YTHDC1Q96MU7 727 aaKnown RBP22.43■■□□□ 1.18
RLF-201ENST00000372771 LOC105371045A0A1W2PR82 267 aa22.27■■□□□ 1.16
RLF-201ENST00000372771 ERICH6Q7L0X2 663 aa22.25■■□□□ 1.15
RLF-201ENST00000372771 TRIM26Q12899 539 aaPredicted RBP22.21■■□□□ 1.15
RLF-201ENST00000372771 CHIC1Q5VXU3 224 aa22.11■■□□□ 1.13
RLF-201ENST00000372771 ITGAEP38570 1179 aa22.07■■□□□ 1.12
RLF-201ENST00000372771 HRCP23327 699 aa22.06■■□□□ 1.12
RLF-201ENST00000372771 NEFLP07196 543 aa22.01■■□□□ 1.11
RLF-201ENST00000372771 HNRNPUL2Q1KMD3 747 aaKnown RBP21.93■■□□□ 1.1
RLF-201ENST00000372771 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.81■■□□□ 1.08
RLF-201ENST00000372771 POLR3GLQ9BT43 218 aa21.8■■□□□ 1.08
RLF-201ENST00000372771 CNGB1Q14028 1251 aaPredicted RBP21.73■■□□□ 1.07
RLF-201ENST00000372771 MYT1LQ9UL68 1186 aa21.66■■□□□ 1.06
RLF-201ENST00000372771 PABPN1Q86U42 306 aaKnown RBP eCLIP21.58■■□□□ 1.05
RLF-201ENST00000372771 ABCC9O60706 1549 aa21.57■■□□□ 1.04
RLF-201ENST00000372771 DIEXFQ68CQ4 756 aaKnown RBP21.48■■□□□ 1.03
RLF-201ENST00000372771 FAM50AQ14320 339 aaKnown RBP21.44■■□□□ 1.02
RLF-201ENST00000372771 NEUROD1Q13562 356 aa21.32■■□□□ 1
RLF-201ENST00000372771 MYT1Q01538 1121 aa21.31■■□□□ 1
RLF-201ENST00000372771 DAXXQ9UER7 740 aaPredicted RBP21.29■■□□□ 1
RLF-201ENST00000372771 SLC4A1APQ9BWU0 796 aaKnown RBP21.27■■□□□ 1
RLF-201ENST00000372771 TRIM52Q96A61 297 aa21.25■□□□□ 0.99
RLF-201ENST00000372771 BCANQ96GW7 911 aa21.14■□□□□ 0.97
RLF-201ENST00000372771 GTF3C3Q9Y5Q9 886 aa21.09■□□□□ 0.97
RLF-201ENST00000372771 ZNF326Q5BKZ1 582 aaKnown RBP21.07■□□□□ 0.96
RLF-201ENST00000372771 P3H3Q8IVL6 736 aa21.05■□□□□ 0.96
RLF-201ENST00000372771 ARID3CA6NKF2 412 aa21.01■□□□□ 0.95
RLF-201ENST00000372771 FBLN2P98095 1184 aa20.99■□□□□ 0.95
RLF-201ENST00000372771 CLSPNQ9HAW4 1339 aa20.97■□□□□ 0.95
RLF-201ENST00000372771 ZNF316A6NFI3 1004 aaPredicted RBP20.95■□□□□ 0.94
RLF-201ENST00000372771 ANP32CO43423 234 aa20.93■□□□□ 0.94
RLF-201ENST00000372771 CSRNP3Q8WYN3 585 aa20.91■□□□□ 0.94
RLF-201ENST00000372771 SCRIBQ14160 1630 aa20.91■□□□□ 0.94
RLF-201ENST00000372771 RTL5Q5HYW3 569 aaPredicted RBP20.84■□□□□ 0.93
RLF-201ENST00000372771 ACIN1Q9UKV3 1341 aaKnown RBP20.73■□□□□ 0.91
RLF-201ENST00000372771 ZCCHC6Q5VYS8 1495 aaKnown RBP20.73■□□□□ 0.91
RLF-201ENST00000372771 ZNF777Q9ULD5 760 aaPredicted RBP20.72■□□□□ 0.91
RLF-201ENST00000372771 CDK11AQ9UQ88 783 aaPredicted RBP20.69■□□□□ 0.9
RLF-201ENST00000372771 BCL11AQ9H165 835 aa20.65■□□□□ 0.9
RLF-201ENST00000372771 DCAF1Q9Y4B6 1507 aa20.57■□□□□ 0.88
RLF-201ENST00000372771 CANXP27824 592 aaKnown RBP20.55■□□□□ 0.88
RLF-201ENST00000372771 SLC24A1O60721 1099 aa20.51■□□□□ 0.87
RLF-201ENST00000372771 DDX10Q13206 875 aaKnown RBP20.48■□□□□ 0.87
RLF-201ENST00000372771 MYO15BQ96JP2 1530 aa20.48■□□□□ 0.87
RLF-201ENST00000372771 TONSLQ96HA7 1378 aa20.46■□□□□ 0.87
RLF-201ENST00000372771 FKBP8Q14318 412 aa20.46■□□□□ 0.87
RLF-201ENST00000372771 CHIC2Q9UKJ5 165 aa20.45■□□□□ 0.86
RLF-201ENST00000372771 ZBTB47Q9UFB7 747 aaPredicted RBP20.43■□□□□ 0.86
RLF-201ENST00000372771 NPM2Q86SE8 214 aaKnown RBP20.42■□□□□ 0.86
RLF-201ENST00000372771 FAM9BQ8IZU0 186 aa20.39■□□□□ 0.85
RLF-201ENST00000372771 HNRNPUQ00839 825 aaKnown RBP eCLIP20.38■□□□□ 0.85
RLF-201ENST00000372771 SALL2Q9Y467 1007 aaPredicted RBP20.36■□□□□ 0.85
RLF-201ENST00000372771 CHGAP10645 457 aaKnown RBP20.34■□□□□ 0.85
RLF-201ENST00000372771 HIRIP3Q9BW71 556 aaPredicted RBP20.34■□□□□ 0.85
RLF-201ENST00000372771 CCDC180Q9P1Z9 1646 aa20.32■□□□□ 0.84
RLF-201ENST00000372771 ANP32AP39687 249 aaKnown RBP20.31■□□□□ 0.84
RLF-201ENST00000372771 NEFMP07197 916 aa20.31■□□□□ 0.84
RLF-201ENST00000372771 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.28■□□□□ 0.842e-6■□□□□ 10.1
RLF-201ENST00000372771 MIER1Q8N108 512 aa20.26■□□□□ 0.83
RLF-201ENST00000372771 PLPPR3Q6T4P5 718 aa20.24■□□□□ 0.83
RLF-201ENST00000372771 CLIP1P30622 1438 aa20.23■□□□□ 0.83
RLF-201ENST00000372771 KDM2AQ9Y2K7 1162 aa20.21■□□□□ 0.83
RLF-201ENST00000372771 SCAF1Q9H7N4 1312 aaKnown RBP20.19■□□□□ 0.82
RLF-201ENST00000372771 RSF1Q96T23 1441 aaPredicted RBP20.18■□□□□ 0.82
RLF-201ENST00000372771 IRX6P78412 446 aaPredicted RBP20.18■□□□□ 0.82
RLF-201ENST00000372771 MTUS2Q5JR59 1369 aa20.17■□□□□ 0.82
RLF-201ENST00000372771 STAG3Q9UJ98 1225 aa20.15■□□□□ 0.82
RLF-201ENST00000372771 RRP7BPQ9NSQ0 103 aa20.14■□□□□ 0.81
RLF-201ENST00000372771 CEP162Q5TB80 1403 aa20.13■□□□□ 0.81
RLF-201ENST00000372771 TMC1Q8TDI8 760 aa20.13■□□□□ 0.81
RLF-201ENST00000372771 MRS2Q9HD23 443 aa20.11■□□□□ 0.81
RLF-201ENST00000372771 ESF1Q9H501 851 aaKnown RBP20.1■□□□□ 0.81
RLF-201ENST00000372771 SENP3Q9H4L4 574 aaPredicted RBP20.09■□□□□ 0.81
RLF-201ENST00000372771 GOLGA3Q08378 1498 aa20.06■□□□□ 0.8
RLF-201ENST00000372771 CCDC136Q96JN2 1154 aa20.06■□□□□ 0.8
RLF-201ENST00000372771 SENP3-EIF4A1A0A087X0R7 540 aa20.05■□□□□ 0.8
RLF-201ENST00000372771 TSPY4P0CV99 314 aa20.04■□□□□ 0.8
RLF-201ENST00000372771 TSPY10P0CW01 314 aa20.04■□□□□ 0.8
RLF-201ENST00000372771 CHMP7Q8WUX9 453 aaPredicted RBP20.04■□□□□ 0.8
RLF-201ENST00000372771 RB1CC1Q8TDY2 1594 aa20.02■□□□□ 0.8
RLF-201ENST00000372771 NPM1P06748 294 aaKnown RBP eCLIP20.02■□□□□ 0.79
RLF-201ENST00000372771 NBR1Q14596 966 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms