RNA–Protein interactions for RNA: ENST00000370008.3

STXBP3-201, Transcript of syntaxin binding protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene STXBP3, Length 2,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STXBP3-201ENST00000370008 NISCHQ9Y2I1 1504 aa35.74■■■■□ 3.31
STXBP3-201ENST00000370008 SHROOM4Q9ULL8 1493 aa30.73■■■□□ 2.51
STXBP3-201ENST00000370008 ZCCHC6Q5VYS8 1495 aaKnown RBP30.24■■■□□ 2.43
STXBP3-201ENST00000370008 SUPT5HO00267 1087 aaKnown RBP30.23■■■□□ 2.43
STXBP3-201ENST00000370008 CCDC180Q9P1Z9 1646 aa30.23■■■□□ 2.43
STXBP3-201ENST00000370008 DCAF8L2P0C7V8 631 aa29.75■■■□□ 2.35
STXBP3-201ENST00000370008 CHIC1Q5VXU3 224 aa29.44■■■□□ 2.3
STXBP3-201ENST00000370008 MYO15BQ96JP2 1530 aa29.34■■■□□ 2.29
STXBP3-201ENST00000370008 DCAF1Q9Y4B6 1507 aa29.26■■■□□ 2.27
STXBP3-201ENST00000370008 HRCP23327 699 aa28.84■■■□□ 2.21
STXBP3-201ENST00000370008 PCGF6Q9BYE7 350 aa28.75■■■□□ 2.19
STXBP3-201ENST00000370008 LOC105371045A0A1W2PR82 267 aa28.62■■■□□ 2.17
STXBP3-201ENST00000370008 ABCC9O60706 1549 aa28.57■■■□□ 2.16
STXBP3-201ENST00000370008 SCRIBQ14160 1630 aa28.47■■■□□ 2.15
STXBP3-201ENST00000370008 RSF1Q96T23 1441 aaPredicted RBP28.38■■■□□ 2.13
STXBP3-201ENST00000370008 PPARGC1BQ86YN6 1023 aaKnown RBP28.26■■■□□ 2.11
STXBP3-201ENST00000370008 TRIM26Q12899 539 aaPredicted RBP28.13■■■□□ 2.09
STXBP3-201ENST00000370008 TRIM41Q8WV44 630 aa28.12■■■□□ 2.09
STXBP3-201ENST00000370008 RB1CC1Q8TDY2 1594 aa28.1■■■□□ 2.09
STXBP3-201ENST00000370008 FAM9AQ8IZU1 332 aaPredicted RBP27.95■■■□□ 2.07
STXBP3-201ENST00000370008 NACADO15069 1562 aa27.95■■■□□ 2.06
STXBP3-201ENST00000370008 CECR2Q9BXF3 1484 aa27.91■■■□□ 2.06
STXBP3-201ENST00000370008 MROH2BQ7Z745 1585 aa27.82■■■□□ 2.04
STXBP3-201ENST00000370008 EHMT2Q96KQ7 1210 aa27.75■■■□□ 2.03
STXBP3-201ENST00000370008 WIZO95785 1651 aa27.67■■■□□ 2.02
STXBP3-201ENST00000370008 ZEB1P37275 1124 aaPredicted RBP27.59■■■□□ 2.01
STXBP3-201ENST00000370008 BAZ1AQ9NRL2 1556 aaPredicted RBP27.48■■□□□ 1.99
STXBP3-201ENST00000370008 EIF4G1Q04637 1599 aaKnown RBP27.32■■□□□ 1.96
STXBP3-201ENST00000370008 TOP2AP11388 1531 aaKnown RBP27.22■■□□□ 1.95
STXBP3-201ENST00000370008 SMARCA4P51532 1647 aa27.17■■□□□ 1.94
STXBP3-201ENST00000370008 CCDC88BA6NC98 1476 aa27.15■■□□□ 1.94
STXBP3-201ENST00000370008 ABCC8Q09428 1581 aa27.14■■□□□ 1.94
STXBP3-201ENST00000370008 SMARCA2P51531 1590 aa27.08■■□□□ 1.93
STXBP3-201ENST00000370008 UNC13AQ9UPW8 1703 aa27.03■■□□□ 1.92
STXBP3-201ENST00000370008 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27■■□□□ 1.91
STXBP3-201ENST00000370008 CCER1Q8TC90 406 aaPredicted RBP26.95■■□□□ 1.91
STXBP3-201ENST00000370008 SOGA1O94964 1423 aa26.95■■□□□ 1.9
STXBP3-201ENST00000370008 CEP162Q5TB80 1403 aa26.9■■□□□ 1.9
STXBP3-201ENST00000370008 TTBK1Q5TCY1 1321 aaPredicted RBP26.9■■□□□ 1.9
STXBP3-201ENST00000370008 WRNQ14191 1432 aaPredicted RBP eCLIP26.88■■□□□ 1.89
STXBP3-201ENST00000370008 PABPN1Q86U42 306 aaKnown RBP eCLIP26.87■■□□□ 1.89
STXBP3-201ENST00000370008 TNIKQ9UKE5 1360 aa26.84■■□□□ 1.89
STXBP3-201ENST00000370008 CSRNP3Q8WYN3 585 aa26.83■■□□□ 1.89
STXBP3-201ENST00000370008 RUSC2Q8N2Y8 1516 aa26.8■■□□□ 1.88
STXBP3-201ENST00000370008 EEA1Q15075 1411 aa26.79■■□□□ 1.88
STXBP3-201ENST00000370008 UBTFP17480 764 aaKnown RBP26.79■■□□□ 1.88
STXBP3-201ENST00000370008 BICRAQ9NZM4 1560 aa26.71■■□□□ 1.87
STXBP3-201ENST00000370008 SCAF1Q9H7N4 1312 aaKnown RBP26.69■■□□□ 1.86
STXBP3-201ENST00000370008 GOLGA3Q08378 1498 aa26.65■■□□□ 1.86
STXBP3-201ENST00000370008 PEG3Q9GZU2 1588 aa26.59■■□□□ 1.85
STXBP3-201ENST00000370008 SYNJ1O43426 1573 aa26.5■■□□□ 1.83
STXBP3-201ENST00000370008 DIEXFQ68CQ4 756 aaKnown RBP26.5■■□□□ 1.83
STXBP3-201ENST00000370008 CEP164Q9UPV0 1460 aa26.47■■□□□ 1.83
STXBP3-201ENST00000370008 ATAD2BQ9ULI0 1458 aa26.46■■□□□ 1.83
STXBP3-201ENST00000370008 BAZ1BQ9UIG0 1483 aaKnown RBP26.41■■□□□ 1.82
STXBP3-201ENST00000370008 KIF21BO75037 1637 aa26.4■■□□□ 1.82
STXBP3-201ENST00000370008 ACIN1Q9UKV3 1341 aaKnown RBP26.39■■□□□ 1.82
STXBP3-201ENST00000370008 CLIP1P30622 1438 aa26.37■■□□□ 1.81
STXBP3-201ENST00000370008 NEUROD1Q13562 356 aa26.34■■□□□ 1.81
STXBP3-201ENST00000370008 HNRNPUL2Q1KMD3 747 aaKnown RBP26.31■■□□□ 1.8
STXBP3-201ENST00000370008 PELP1Q8IZL8 1130 aaKnown RBP26.3■■□□□ 1.8
STXBP3-201ENST00000370008 RAPGEF2Q9Y4G8 1499 aa26.26■■□□□ 1.79
STXBP3-201ENST00000370008 ZNF316A6NFI3 1004 aaPredicted RBP26.26■■□□□ 1.79
STXBP3-201ENST00000370008 RANGAP1P46060 587 aaPredicted RBP26.26■■□□□ 1.79
STXBP3-201ENST00000370008 VPS8Q8N3P4 1428 aa26.25■■□□□ 1.79
STXBP3-201ENST00000370008 APLP2Q06481 763 aa26.23■■□□□ 1.79
STXBP3-201ENST00000370008 CENPBP07199 599 aaPredicted RBP26.23■■□□□ 1.79
STXBP3-201ENST00000370008 TOP2BQ02880 1626 aa26.14■■□□□ 1.78
STXBP3-201ENST00000370008 GTF3C3Q9Y5Q9 886 aa26.11■■□□□ 1.77
STXBP3-201ENST00000370008 BIVM-ERCC5R4GMW8 1640 aa26.02■■□□□ 1.76
STXBP3-201ENST00000370008 PRXQ9BXM0 1461 aa25.96■■□□□ 1.75
STXBP3-201ENST00000370008 ERICH3Q5RHP9 1530 aa25.94■■□□□ 1.74
STXBP3-201ENST00000370008 YTHDC1Q96MU7 727 aaKnown RBP25.93■■□□□ 1.74
STXBP3-201ENST00000370008 MIER1Q8N108 512 aa25.92■■□□□ 1.74
STXBP3-201ENST00000370008 ARAP1Q96P48 1450 aa25.9■■□□□ 1.74
STXBP3-201ENST00000370008 NCAPD3P42695 1498 aa25.88■■□□□ 1.73
STXBP3-201ENST00000370008 CUX1P39880 1505 aa25.88■■□□□ 1.73
STXBP3-201ENST00000370008 HMGXB3Q12766 1538 aa25.86■■□□□ 1.73
STXBP3-201ENST00000370008 KANK4Q5T7N3 995 aaPredicted RBP25.85■■□□□ 1.73
STXBP3-201ENST00000370008 KIF27Q86VH2 1401 aa25.83■■□□□ 1.72
STXBP3-201ENST00000370008 DHX57Q6P158 1386 aaKnown RBP25.75■■□□□ 1.71
STXBP3-201ENST00000370008 CFTRP13569 1480 aa25.74■■□□□ 1.71
STXBP3-201ENST00000370008 CLSPNQ9HAW4 1339 aa25.73■■□□□ 1.71
STXBP3-201ENST00000370008 RRBP1Q9P2E9 1410 aaKnown RBP25.66■■□□□ 1.7
STXBP3-201ENST00000370008 ARHGAP35Q9NRY4 1499 aa25.64■■□□□ 1.7
STXBP3-201ENST00000370008 CCNB3Q8WWL7 1395 aa25.58■■□□□ 1.69
STXBP3-201ENST00000370008 ITGAEP38570 1179 aa25.57■■□□□ 1.68
STXBP3-201ENST00000370008 CUX2O14529 1486 aa25.56■■□□□ 1.68
STXBP3-201ENST00000370008 IGF1RP08069 1367 aa25.54■■□□□ 1.68
STXBP3-201ENST00000370008 PRDM2Q13029 1718 aa25.46■■□□□ 1.67
STXBP3-201ENST00000370008 CARMIL1Q5VZK9 1371 aa25.45■■□□□ 1.66
STXBP3-201ENST00000370008 CADPSQ9ULU8 1353 aa25.45■■□□□ 1.66
STXBP3-201ENST00000370008 FGD5Q6ZNL6 1462 aa25.4■■□□□ 1.66
STXBP3-201ENST00000370008 TIAM1Q13009 1591 aa25.38■■□□□ 1.65
STXBP3-201ENST00000370008 RAB3GAP2Q9H2M9 1393 aa25.38■■□□□ 1.65
STXBP3-201ENST00000370008 MAP3K1Q13233 1512 aa25.34■■□□□ 1.65
STXBP3-201ENST00000370008 LRRC9Q6ZRR7 1453 aa25.31■■□□□ 1.64
STXBP3-201ENST00000370008 P3H3Q8IVL6 736 aa25.31■■□□□ 1.64
STXBP3-201ENST00000370008 PHLDB1Q86UU1 1377 aa25.28■■□□□ 1.64
STXBP3-201ENST00000370008 FAM50AQ14320 339 aaKnown RBP25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms