RNA–Protein interactions for RNA: ENST00000369750.3

TPBG-201, Transcript of trophoblast glycoprotein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPBG, Length 6,484 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPBG-201ENST00000369750 DCAF8L2P0C7V8 631 aa28.97■■■□□ 2.23
TPBG-201ENST00000369750 SUPT5HO00267 1087 aaKnown RBP26.37■■□□□ 1.81
TPBG-201ENST00000369750 EHMT2Q96KQ7 1210 aa26.35■■□□□ 1.81
TPBG-201ENST00000369750 SHROOM4Q9ULL8 1493 aa26.14■■□□□ 1.77
TPBG-201ENST00000369750 NISCHQ9Y2I1 1504 aa25.66■■□□□ 1.7
TPBG-201ENST00000369750 FAM9AQ8IZU1 332 aaPredicted RBP25.48■■□□□ 1.67
TPBG-201ENST00000369750 RANGAP1P46060 587 aaPredicted RBP25.33■■□□□ 1.65
TPBG-201ENST00000369750 APLP2Q06481 763 aa25.29■■□□□ 1.64
TPBG-201ENST00000369750 TTBK1Q5TCY1 1321 aaPredicted RBP25.25■■□□□ 1.63
TPBG-201ENST00000369750 ATP1B4Q9UN42 357 aaPredicted RBP25.17■■□□□ 1.62
TPBG-201ENST00000369750 MYT1LQ9UL68 1186 aa24.64■■□□□ 1.53
TPBG-201ENST00000369750 CHIC1Q5VXU3 224 aa24.41■■□□□ 1.5
TPBG-201ENST00000369750 UBTFP17480 764 aaKnown RBP24.32■■□□□ 1.48
TPBG-201ENST00000369750 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.32■■□□□ 1.48
TPBG-201ENST00000369750 HNRNPUL2Q1KMD3 747 aaKnown RBP24.32■■□□□ 1.48
TPBG-201ENST00000369750 TRIM41Q8WV44 630 aa24.25■■□□□ 1.47
TPBG-201ENST00000369750 PCGF6Q9BYE7 350 aa24.17■■□□□ 1.46
TPBG-201ENST00000369750 PELP1Q8IZL8 1130 aaKnown RBP24.11■■□□□ 1.45
TPBG-201ENST00000369750 PPARGC1BQ86YN6 1023 aaKnown RBP23.87■■□□□ 1.41
TPBG-201ENST00000369750 POLR3GLQ9BT43 218 aa23.81■■□□□ 1.4
TPBG-201ENST00000369750 ITGAEP38570 1179 aa23.8■■□□□ 1.4
TPBG-201ENST00000369750 PABPN1Q86U42 306 aaKnown RBP eCLIP23.79■■□□□ 1.4
TPBG-201ENST00000369750 CCER1Q8TC90 406 aaPredicted RBP23.78■■□□□ 1.4
TPBG-201ENST00000369750 SLC4A1APQ9BWU0 796 aaKnown RBP23.73■■□□□ 1.39
TPBG-201ENST00000369750 CNGB1Q14028 1251 aaPredicted RBP23.66■■□□□ 1.38
TPBG-201ENST00000369750 ABCC9O60706 1549 aa23.63■■□□□ 1.37
TPBG-201ENST00000369750 FBLN2P98095 1184 aa23.62■■□□□ 1.37
TPBG-201ENST00000369750 ERICH6Q7L0X2 663 aa23.48■■□□□ 1.35
TPBG-201ENST00000369750 PLPPR3Q6T4P5 718 aa23.4■■□□□ 1.34
TPBG-201ENST00000369750 YTHDC1Q96MU7 727 aaKnown RBP23.34■■□□□ 1.33
TPBG-201ENST00000369750 BCANQ96GW7 911 aa23.28■■□□□ 1.32
TPBG-201ENST00000369750 NEFLP07196 543 aa23.14■■□□□ 1.29
TPBG-201ENST00000369750 ARID3CA6NKF2 412 aa23.11■■□□□ 1.29
TPBG-201ENST00000369750 SLC24A1O60721 1099 aa23.08■■□□□ 1.28
TPBG-201ENST00000369750 FAM50AQ14320 339 aaKnown RBP23.06■■□□□ 1.28
TPBG-201ENST00000369750 CENPBP07199 599 aaPredicted RBP23.04■■□□□ 1.28
TPBG-201ENST00000369750 TRIM52Q96A61 297 aa23.02■■□□□ 1.28
TPBG-201ENST00000369750 ZEB1P37275 1124 aaPredicted RBP22.95■■□□□ 1.26
TPBG-201ENST00000369750 ESF1Q9H501 851 aaKnown RBP22.88■■□□□ 1.25
TPBG-201ENST00000369750 ZNF326Q5BKZ1 582 aaKnown RBP22.87■■□□□ 1.25
TPBG-201ENST00000369750 LOC105371045A0A1W2PR82 267 aa22.83■■□□□ 1.25
TPBG-201ENST00000369750 P3H3Q8IVL6 736 aa22.79■■□□□ 1.24
TPBG-201ENST00000369750 DAXXQ9UER7 740 aaPredicted RBP22.76■■□□□ 1.23
TPBG-201ENST00000369750 BCL11AQ9H165 835 aa22.76■■□□□ 1.23
TPBG-201ENST00000369750 ZNF777Q9ULD5 760 aaPredicted RBP22.73■■□□□ 1.23
TPBG-201ENST00000369750 NEUROD1Q13562 356 aa22.69■■□□□ 1.22
TPBG-201ENST00000369750 NPM1P06748 294 aaKnown RBP eCLIP22.66■■□□□ 1.22
TPBG-201ENST00000369750 STAG3Q9UJ98 1225 aa22.65■■□□□ 1.22
TPBG-201ENST00000369750 CLSPNQ9HAW4 1339 aa22.58■■□□□ 1.2
TPBG-201ENST00000369750 CHGAP10645 457 aaKnown RBP22.58■■□□□ 1.2
TPBG-201ENST00000369750 SCAF1Q9H7N4 1312 aaKnown RBP22.55■■□□□ 1.2
TPBG-201ENST00000369750 TRIM26Q12899 539 aaPredicted RBP22.49■■□□□ 1.19
TPBG-201ENST00000369750 PLEKHG5O94827 1062 aa22.48■■□□□ 1.19
TPBG-201ENST00000369750 A0A0G2JS52 829 aa22.47■■□□□ 1.19
TPBG-201ENST00000369750 SENP3Q9H4L4 574 aaPredicted RBP22.46■■□□□ 1.19
TPBG-201ENST00000369750 ZBTB47Q9UFB7 747 aaPredicted RBP22.35■■□□□ 1.17
TPBG-201ENST00000369750 MYT1Q01538 1121 aa22.34■■□□□ 1.17
TPBG-201ENST00000369750 NEFMP07197 916 aa22.31■■□□□ 1.16
TPBG-201ENST00000369750 ZBTB7CA1YPR0 619 aa22.24■■□□□ 1.15
TPBG-201ENST00000369750 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.23■■□□□ 1.15
TPBG-201ENST00000369750 ZNF316A6NFI3 1004 aaPredicted RBP22.21■■□□□ 1.15
TPBG-201ENST00000369750 TRHP20396 242 aaPredicted RBP22.2■■□□□ 1.14
TPBG-201ENST00000369750 CANXP27824 592 aaKnown RBP22.2■■□□□ 1.14
TPBG-201ENST00000369750 ARID4BQ4LE39 1312 aaPredicted RBP22.19■■□□□ 1.14
TPBG-201ENST00000369750 CDK11AQ9UQ88 783 aaPredicted RBP22.18■■□□□ 1.14
TPBG-201ENST00000369750 CHMP7Q8WUX9 453 aaPredicted RBP22.16■■□□□ 1.14
TPBG-201ENST00000369750 C14orf37Q86TY3 774 aa22.14■■□□□ 1.13
TPBG-201ENST00000369750 SCRIBQ14160 1630 aa22.14■■□□□ 1.13
TPBG-201ENST00000369750 KCNH8Q96L42 1107 aa22.08■■□□□ 1.13
TPBG-201ENST00000369750 HRCP23327 699 aa22.01■■□□□ 1.11
TPBG-201ENST00000369750 HAP1P54257 671 aaPredicted RBP22■■□□□ 1.11
TPBG-201ENST00000369750 CHIC2Q9UKJ5 165 aa21.93■■□□□ 1.1
TPBG-201ENST00000369750 PPP1R15AO75807 674 aaPredicted RBP21.92■■□□□ 1.1
TPBG-201ENST00000369750 ANP32CO43423 234 aa21.9■■□□□ 1.1
TPBG-201ENST00000369750 ERCC6Q03468 1493 aa21.85■■□□□ 1.09
TPBG-201ENST00000369750 CSRNP3Q8WYN3 585 aa21.8■■□□□ 1.08
TPBG-201ENST00000369750 KDM2AQ9Y2K7 1162 aa21.79■■□□□ 1.08
TPBG-201ENST00000369750 NPM2Q86SE8 214 aaKnown RBP21.77■■□□□ 1.08
TPBG-201ENST00000369750 ARXQ96QS3 562 aa21.77■■□□□ 1.08
TPBG-201ENST00000369750 DIEXFQ68CQ4 756 aaKnown RBP21.76■■□□□ 1.07
TPBG-201ENST00000369750 LMOD2Q6P5Q4 547 aa21.73■■□□□ 1.07
TPBG-201ENST00000369750 TSPY4P0CV99 314 aa21.71■■□□□ 1.07
TPBG-201ENST00000369750 TSPY10P0CW01 314 aa21.71■■□□□ 1.07
TPBG-201ENST00000369750 SALL2Q9Y467 1007 aaPredicted RBP21.7■■□□□ 1.06
TPBG-201ENST00000369750 MLECQ14165 292 aa21.66■■□□□ 1.06
TPBG-201ENST00000369750 RTL5Q5HYW3 569 aaPredicted RBP21.63■■□□□ 1.05
TPBG-201ENST00000369750 NPHP1O15259 732 aa21.55■■□□□ 1.04
TPBG-201ENST00000369750 TMC1Q8TDI8 760 aa21.51■■□□□ 1.03
TPBG-201ENST00000369750 PLEKHD1A6NEE1 506 aa21.5■■□□□ 1.03
TPBG-201ENST00000369750 TONSLQ96HA7 1378 aa21.49■■□□□ 1.03
TPBG-201ENST00000369750 MTUS2Q5JR59 1369 aa21.47■■□□□ 1.03
TPBG-201ENST00000369750 RGL3Q3MIN7 710 aa21.46■■□□□ 1.03
TPBG-201ENST00000369750 PPM1GO15355 546 aaPredicted RBP21.45■■□□□ 1.02
TPBG-201ENST00000369750 AEBP2Q6ZN18 517 aaPredicted RBP21.44■■□□□ 1.02
TPBG-201ENST00000369750 RRP7BPQ9NSQ0 103 aa21.44■■□□□ 1.02
TPBG-201ENST00000369750 RB1CC1Q8TDY2 1594 aa21.44■■□□□ 1.02
TPBG-201ENST00000369750 FAM9BQ8IZU0 186 aa21.4■■□□□ 1.02
TPBG-201ENST00000369750 TULP1O00294 542 aaPredicted RBP21.38■■□□□ 1.01
TPBG-201ENST00000369750 WDR43Q15061 677 aaKnown RBP eCLIP21.37■■□□□ 1.01
TPBG-201ENST00000369750 HSP90AA1P07900 732 aaKnown RBP21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms