RNA–Protein interactions for RNA: ENST00000369042.5

BEND3-201, Transcript of BEN domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene BEND3, Length 6,200 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEND3-201ENST00000369042 DCAF8L2P0C7V8 631 aa19.38■□□□□ 0.69
BEND3-201ENST00000369042 SUPT5HO00267 1087 aaKnown RBP18.57■□□□□ 0.56
BEND3-201ENST00000369042 EHMT2Q96KQ7 1210 aa18.34■□□□□ 0.53
BEND3-201ENST00000369042 SHROOM4Q9ULL8 1493 aa18.16■□□□□ 0.5
BEND3-201ENST00000369042 PELP1Q8IZL8 1130 aaKnown RBP18.06■□□□□ 0.48
BEND3-201ENST00000369042 TTBK1Q5TCY1 1321 aaPredicted RBP17.74■□□□□ 0.43
BEND3-201ENST00000369042 APLP2Q06481 763 aa17.67■□□□□ 0.42
BEND3-201ENST00000369042 PCGF6Q9BYE7 350 aa17.65■□□□□ 0.42
BEND3-201ENST00000369042 NISCHQ9Y2I1 1504 aa17.64■□□□□ 0.41
BEND3-201ENST00000369042 FAM9AQ8IZU1 332 aaPredicted RBP17.62■□□□□ 0.41
BEND3-201ENST00000369042 ERICH6Q7L0X2 663 aa17.51■□□□□ 0.39
BEND3-201ENST00000369042 CENPBP07199 599 aaPredicted RBP17.39■□□□□ 0.37
BEND3-201ENST00000369042 RANGAP1P46060 587 aaPredicted RBP17.37■□□□□ 0.37
BEND3-201ENST00000369042 CCER1Q8TC90 406 aaPredicted RBP17.28■□□□□ 0.36
BEND3-201ENST00000369042 YTHDC1Q96MU7 727 aaKnown RBP17.24■□□□□ 0.35
BEND3-201ENST00000369042 ZEB1P37275 1124 aaPredicted RBP17.17■□□□□ 0.34
BEND3-201ENST00000369042 ATP1B4Q9UN42 357 aaPredicted RBP17.13■□□□□ 0.33
BEND3-201ENST00000369042 TRIM41Q8WV44 630 aa17.05■□□□□ 0.32
BEND3-201ENST00000369042 NEFLP07196 543 aa17.03■□□□□ 0.32
BEND3-201ENST00000369042 PPARGC1BQ86YN6 1023 aaKnown RBP17■□□□□ 0.31
BEND3-201ENST00000369042 UBTFP17480 764 aaKnown RBP16.93■□□□□ 0.3
BEND3-201ENST00000369042 MYT1Q01538 1121 aa16.9■□□□□ 0.3
BEND3-201ENST00000369042 TRIM26Q12899 539 aaPredicted RBP16.65■□□□□ 0.26
BEND3-201ENST00000369042 HRCP23327 699 aa16.65■□□□□ 0.26
BEND3-201ENST00000369042 POLR3GLQ9BT43 218 aa16.64■□□□□ 0.25
BEND3-201ENST00000369042 DAXXQ9UER7 740 aaPredicted RBP16.63■□□□□ 0.25
BEND3-201ENST00000369042 ITGAEP38570 1179 aa16.62■□□□□ 0.25
BEND3-201ENST00000369042 CNGB1Q14028 1251 aaPredicted RBP16.6■□□□□ 0.25
BEND3-201ENST00000369042 LOC105371045A0A1W2PR82 267 aa16.49■□□□□ 0.23
BEND3-201ENST00000369042 HNRNPUL2Q1KMD3 747 aaKnown RBP16.47■□□□□ 0.23
BEND3-201ENST00000369042 MYT1LQ9UL68 1186 aa16.4■□□□□ 0.22
BEND3-201ENST00000369042 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.38■□□□□ 0.21
BEND3-201ENST00000369042 CHIC1Q5VXU3 224 aa16.29■□□□□ 0.2
BEND3-201ENST00000369042 DIEXFQ68CQ4 756 aaKnown RBP16.29■□□□□ 0.2
BEND3-201ENST00000369042 RTL5Q5HYW3 569 aaPredicted RBP16.28■□□□□ 0.2
BEND3-201ENST00000369042 ZNF316A6NFI3 1004 aaPredicted RBP16.27■□□□□ 0.2
BEND3-201ENST00000369042 SLC4A1APQ9BWU0 796 aaKnown RBP16.25■□□□□ 0.19
BEND3-201ENST00000369042 BCANQ96GW7 911 aa16.24■□□□□ 0.19
BEND3-201ENST00000369042 CLSPNQ9HAW4 1339 aa16.23■□□□□ 0.19
BEND3-201ENST00000369042 GTF3C3Q9Y5Q9 886 aa16.13■□□□□ 0.17
BEND3-201ENST00000369042 NEUROD1Q13562 356 aa16.06■□□□□ 0.16
BEND3-201ENST00000369042 FAM50AQ14320 339 aaKnown RBP16.06■□□□□ 0.16
BEND3-201ENST00000369042 TRIM52Q96A61 297 aa15.99■□□□□ 0.15
BEND3-201ENST00000369042 CDK11AQ9UQ88 783 aaPredicted RBP15.94■□□□□ 0.14
BEND3-201ENST00000369042 BCL11AQ9H165 835 aa15.92■□□□□ 0.14
BEND3-201ENST00000369042 ZNF326Q5BKZ1 582 aaKnown RBP15.91■□□□□ 0.14
BEND3-201ENST00000369042 ANP32CO43423 234 aa15.89■□□□□ 0.13
BEND3-201ENST00000369042 ZBTB47Q9UFB7 747 aaPredicted RBP15.78■□□□□ 0.12
BEND3-201ENST00000369042 ACIN1Q9UKV3 1341 aaKnown RBP15.76■□□□□ 0.11
BEND3-201ENST00000369042 CANXP27824 592 aaKnown RBP15.76■□□□□ 0.11
BEND3-201ENST00000369042 NPM2Q86SE8 214 aaKnown RBP15.76■□□□□ 0.11
BEND3-201ENST00000369042 SLC24A1O60721 1099 aa15.73■□□□□ 0.11
BEND3-201ENST00000369042 ANP32AP39687 249 aaKnown RBP15.68■□□□□ 0.1
BEND3-201ENST00000369042 EIF5BO60841 1220 aaKnown RBP15.66■□□□□ 0.1
BEND3-201ENST00000369042 FKBP8Q14318 412 aa15.61■□□□□ 0.09
BEND3-201ENST00000369042 ARID3CA6NKF2 412 aa15.61■□□□□ 0.09
BEND3-201ENST00000369042 PABPN1Q86U42 306 aaKnown RBP eCLIP15.57■□□□□ 0.08
BEND3-201ENST00000369042 P3H3Q8IVL6 736 aa15.57■□□□□ 0.08
BEND3-201ENST00000369042 FBLN2P98095 1184 aa15.53■□□□□ 0.08
BEND3-201ENST00000369042 NEFMP07197 916 aa15.51■□□□□ 0.07
BEND3-201ENST00000369042 NBR1Q14596 966 aa15.49■□□□□ 0.07
BEND3-201ENST00000369042 SALL2Q9Y467 1007 aaPredicted RBP15.46■□□□□ 0.07
BEND3-201ENST00000369042 HNRNPUQ00839 825 aaKnown RBP eCLIP15.45■□□□□ 0.06
BEND3-201ENST00000369042 ARXQ96QS3 562 aa15.45■□□□□ 0.06
BEND3-201ENST00000369042 ZNF777Q9ULD5 760 aaPredicted RBP15.45■□□□□ 0.06
BEND3-201ENST00000369042 FAM9BQ8IZU0 186 aa15.45■□□□□ 0.06
BEND3-201ENST00000369042 HSP90AA1P07900 732 aaKnown RBP15.44■□□□□ 0.06
BEND3-201ENST00000369042 ANP32BQ92688 251 aaKnown RBP15.44■□□□□ 0.06
BEND3-201ENST00000369042 DDX10Q13206 875 aaKnown RBP15.41■□□□□ 0.06
BEND3-201ENST00000369042 ABCC9O60706 1549 aa15.35■□□□□ 0.05
BEND3-201ENST00000369042 IRX6P78412 446 aaPredicted RBP15.35■□□□□ 0.05
BEND3-201ENST00000369042 UPF2Q9HAU5 1272 aaKnown RBP15.33■□□□□ 0.05
BEND3-201ENST00000369042 TONSLQ96HA7 1378 aa15.32■□□□□ 0.04
BEND3-201ENST00000369042 SCAF1Q9H7N4 1312 aaKnown RBP15.32■□□□□ 0.04
BEND3-201ENST00000369042 CSRNP3Q8WYN3 585 aa15.31■□□□□ 0.04
BEND3-201ENST00000369042 CCDC136Q96JN2 1154 aa15.31■□□□□ 0.04
BEND3-201ENST00000369042 CHGAP10645 457 aaKnown RBP15.28■□□□□ 0.04
BEND3-201ENST00000369042 GLIPR1L2Q4G1C9 344 aa15.27■□□□□ 0.03
BEND3-201ENST00000369042 HIRIP3Q9BW71 556 aaPredicted RBP15.23■□□□□ 0.03
BEND3-201ENST00000369042 PLPPR3Q6T4P5 718 aa15.22■□□□□ 0.03
BEND3-201ENST00000369042 MIER1Q8N108 512 aa15.22■□□□□ 0.03
BEND3-201ENST00000369042 TMC1Q8TDI8 760 aa15.22■□□□□ 0.03
BEND3-201ENST00000369042 CHIC2Q9UKJ5 165 aa15.2■□□□□ 0.02
BEND3-201ENST00000369042 MRS2Q9HD23 443 aa15.17■□□□□ 0.02
BEND3-201ENST00000369042 STAG3Q9UJ98 1225 aa15.17■□□□□ 0.02
BEND3-201ENST00000369042 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.17■□□□□ 0.02
BEND3-201ENST00000369042 WDR43Q15061 677 aaKnown RBP eCLIP15.15■□□□□ 0.02
BEND3-201ENST00000369042 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.14■□□□□ 0.019e-8■■□□□ 14
BEND3-201ENST00000369042 SENP3-EIF4A1A0A087X0R7 540 aa15.14■□□□□ 0.01
BEND3-201ENST00000369042 KDM2AQ9Y2K7 1162 aa15.14■□□□□ 0.01
BEND3-201ENST00000369042 ESF1Q9H501 851 aaKnown RBP15.11■□□□□ 0.01
BEND3-201ENST00000369042 DCAF1Q9Y4B6 1507 aa15.1■□□□□ 0.01
BEND3-201ENST00000369042 SENP3Q9H4L4 574 aaPredicted RBP15.07■□□□□ 0
BEND3-201ENST00000369042 MYH16Q9H6N6 1097 aa15□□□□□ -0.01
BEND3-201ENST00000369042 TPRNQ4KMQ1 711 aa15□□□□□ -0.01
BEND3-201ENST00000369042 RTN4Q9NQC3 1192 aaKnown RBP14.99□□□□□ -0.01
BEND3-201ENST00000369042 TRIM44Q96DX7 344 aaPredicted RBP14.99□□□□□ -0.01
BEND3-201ENST00000369042 PLEKHG5O94827 1062 aa14.98□□□□□ -0.01
BEND3-201ENST00000369042 DDRGK1Q96HY6 314 aa14.98□□□□□ -0.01
BEND3-201ENST00000369042 NCLP19338 710 aaKnown RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms