RNA–Protein interactions for RNA: ENST00000366960.7

RPS6KC1-202, Transcript of ribosomal protein S6 kinase C1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPS6KC1, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-202ENST00000366960 DCAF8L2P0C7V8 631 aa24.8■■□□□ 1.56
RPS6KC1-202ENST00000366960 SUPT5HO00267 1087 aaKnown RBP23.83■■□□□ 1.41
RPS6KC1-202ENST00000366960 SHROOM4Q9ULL8 1493 aa23.32■■□□□ 1.32
RPS6KC1-202ENST00000366960 EHMT2Q96KQ7 1210 aa23.25■■□□□ 1.31
RPS6KC1-202ENST00000366960 NISCHQ9Y2I1 1504 aa23.15■■□□□ 1.3
RPS6KC1-202ENST00000366960 FAM9AQ8IZU1 332 aaPredicted RBP22.54■■□□□ 1.2
RPS6KC1-202ENST00000366960 PCGF6Q9BYE7 350 aa22.51■■□□□ 1.19
RPS6KC1-202ENST00000366960 TTBK1Q5TCY1 1321 aaPredicted RBP22.47■■□□□ 1.19
RPS6KC1-202ENST00000366960 PELP1Q8IZL8 1130 aaKnown RBP22.4■■□□□ 1.18
RPS6KC1-202ENST00000366960 APLP2Q06481 763 aa22.34■■□□□ 1.17
RPS6KC1-202ENST00000366960 RANGAP1P46060 587 aaPredicted RBP22.06■■□□□ 1.12
RPS6KC1-202ENST00000366960 CCER1Q8TC90 406 aaPredicted RBP21.92■■□□□ 1.1
RPS6KC1-202ENST00000366960 TRIM41Q8WV44 630 aa21.88■■□□□ 1.09
RPS6KC1-202ENST00000366960 CENPBP07199 599 aaPredicted RBP21.86■■□□□ 1.09
RPS6KC1-202ENST00000366960 ZEB1P37275 1124 aaPredicted RBP21.76■■□□□ 1.07
RPS6KC1-202ENST00000366960 PPARGC1BQ86YN6 1023 aaKnown RBP21.69■■□□□ 1.06
RPS6KC1-202ENST00000366960 ATP1B4Q9UN42 357 aaPredicted RBP21.69■■□□□ 1.06
RPS6KC1-202ENST00000366960 YTHDC1Q96MU7 727 aaKnown RBP21.67■■□□□ 1.06
RPS6KC1-202ENST00000366960 UBTFP17480 764 aaKnown RBP21.64■■□□□ 1.05
RPS6KC1-202ENST00000366960 ERICH6Q7L0X2 663 aa21.64■■□□□ 1.05
RPS6KC1-202ENST00000366960 NEFLP07196 543 aa21.33■■□□□ 1.01
RPS6KC1-202ENST00000366960 TRIM26Q12899 539 aaPredicted RBP21.3■■□□□ 1
RPS6KC1-202ENST00000366960 LOC105371045A0A1W2PR82 267 aa21.3■■□□□ 1
RPS6KC1-202ENST00000366960 HRCP23327 699 aa21.29■■□□□ 1
RPS6KC1-202ENST00000366960 ITGAEP38570 1179 aa21.14■□□□□ 0.97
RPS6KC1-202ENST00000366960 CHIC1Q5VXU3 224 aa21.09■□□□□ 0.97
RPS6KC1-202ENST00000366960 HNRNPUL2Q1KMD3 747 aaKnown RBP21.03■□□□□ 0.96
RPS6KC1-202ENST00000366960 POLR3GLQ9BT43 218 aa20.95■□□□□ 0.94
RPS6KC1-202ENST00000366960 CNGB1Q14028 1251 aaPredicted RBP20.94■□□□□ 0.94
RPS6KC1-202ENST00000366960 MYT1Q01538 1121 aa20.94■□□□□ 0.94
RPS6KC1-202ENST00000366960 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.88■□□□□ 0.93
RPS6KC1-202ENST00000366960 DIEXFQ68CQ4 756 aaKnown RBP20.71■□□□□ 0.91
RPS6KC1-202ENST00000366960 DAXXQ9UER7 740 aaPredicted RBP20.66■□□□□ 0.9
RPS6KC1-202ENST00000366960 MYT1LQ9UL68 1186 aa20.65■□□□□ 0.9
RPS6KC1-202ENST00000366960 BCANQ96GW7 911 aa20.45■□□□□ 0.86
RPS6KC1-202ENST00000366960 GTF3C3Q9Y5Q9 886 aa20.44■□□□□ 0.86
RPS6KC1-202ENST00000366960 FAM50AQ14320 339 aaKnown RBP20.43■□□□□ 0.86
RPS6KC1-202ENST00000366960 NEUROD1Q13562 356 aa20.4■□□□□ 0.86
RPS6KC1-202ENST00000366960 SLC4A1APQ9BWU0 796 aaKnown RBP20.38■□□□□ 0.85
RPS6KC1-202ENST00000366960 CLSPNQ9HAW4 1339 aa20.3■□□□□ 0.84
RPS6KC1-202ENST00000366960 TRIM52Q96A61 297 aa20.3■□□□□ 0.84
RPS6KC1-202ENST00000366960 RTL5Q5HYW3 569 aaPredicted RBP20.29■□□□□ 0.84
RPS6KC1-202ENST00000366960 PABPN1Q86U42 306 aaKnown RBP eCLIP20.24■□□□□ 0.83
RPS6KC1-202ENST00000366960 ZNF316A6NFI3 1004 aaPredicted RBP20.21■□□□□ 0.83
RPS6KC1-202ENST00000366960 ZNF326Q5BKZ1 582 aaKnown RBP20.18■□□□□ 0.82
RPS6KC1-202ENST00000366960 ANP32CO43423 234 aa20.12■□□□□ 0.81
RPS6KC1-202ENST00000366960 ACIN1Q9UKV3 1341 aaKnown RBP20.06■□□□□ 0.8
RPS6KC1-202ENST00000366960 CDK11AQ9UQ88 783 aaPredicted RBP20.02■□□□□ 0.8
RPS6KC1-202ENST00000366960 ABCC9O60706 1549 aa20■□□□□ 0.79
RPS6KC1-202ENST00000366960 P3H3Q8IVL6 736 aa19.99■□□□□ 0.79
RPS6KC1-202ENST00000366960 ARID3CA6NKF2 412 aa19.96■□□□□ 0.79
RPS6KC1-202ENST00000366960 BCL11AQ9H165 835 aa19.93■□□□□ 0.78
RPS6KC1-202ENST00000366960 CSRNP3Q8WYN3 585 aa19.89■□□□□ 0.77
RPS6KC1-202ENST00000366960 FBLN2P98095 1184 aa19.87■□□□□ 0.77
RPS6KC1-202ENST00000366960 FKBP8Q14318 412 aa19.76■□□□□ 0.75
RPS6KC1-202ENST00000366960 NPM2Q86SE8 214 aaKnown RBP19.75■□□□□ 0.75
RPS6KC1-202ENST00000366960 CANXP27824 592 aaKnown RBP19.75■□□□□ 0.75
RPS6KC1-202ENST00000366960 ZNF777Q9ULD5 760 aaPredicted RBP19.71■□□□□ 0.75
RPS6KC1-202ENST00000366960 ZBTB47Q9UFB7 747 aaPredicted RBP19.7■□□□□ 0.74
RPS6KC1-202ENST00000366960 DDX10Q13206 875 aaKnown RBP19.69■□□□□ 0.74
RPS6KC1-202ENST00000366960 SLC24A1O60721 1099 aa19.68■□□□□ 0.74
RPS6KC1-202ENST00000366960 ANP32AP39687 249 aaKnown RBP19.66■□□□□ 0.74
RPS6KC1-202ENST00000366960 HNRNPUQ00839 825 aaKnown RBP eCLIP19.64■□□□□ 0.74
RPS6KC1-202ENST00000366960 FAM9BQ8IZU0 186 aa19.6■□□□□ 0.73
RPS6KC1-202ENST00000366960 SALL2Q9Y467 1007 aaPredicted RBP19.6■□□□□ 0.73
RPS6KC1-202ENST00000366960 TONSLQ96HA7 1378 aa19.54■□□□□ 0.72
RPS6KC1-202ENST00000366960 SCAF1Q9H7N4 1312 aaKnown RBP19.54■□□□□ 0.72
RPS6KC1-202ENST00000366960 MIER1Q8N108 512 aa19.5■□□□□ 0.71
RPS6KC1-202ENST00000366960 HIRIP3Q9BW71 556 aaPredicted RBP19.5■□□□□ 0.71
RPS6KC1-202ENST00000366960 NEFMP07197 916 aa19.49■□□□□ 0.71
RPS6KC1-202ENST00000366960 CHIC2Q9UKJ5 165 aa19.48■□□□□ 0.71
RPS6KC1-202ENST00000366960 DCAF1Q9Y4B6 1507 aa19.47■□□□□ 0.71
RPS6KC1-202ENST00000366960 EIF5BO60841 1220 aaKnown RBP19.46■□□□□ 0.71
RPS6KC1-202ENST00000366960 IRX6P78412 446 aaPredicted RBP19.45■□□□□ 0.7
RPS6KC1-202ENST00000366960 NBR1Q14596 966 aa19.41■□□□□ 0.7
RPS6KC1-202ENST00000366960 CHGAP10645 457 aaKnown RBP19.4■□□□□ 0.7
RPS6KC1-202ENST00000366960 CCDC136Q96JN2 1154 aa19.38■□□□□ 0.69
RPS6KC1-202ENST00000366960 TMC1Q8TDI8 760 aa19.35■□□□□ 0.69
RPS6KC1-202ENST00000366960 MRS2Q9HD23 443 aa19.34■□□□□ 0.69
RPS6KC1-202ENST00000366960 HSP90AA1P07900 732 aaKnown RBP19.33■□□□□ 0.68
RPS6KC1-202ENST00000366960 KDM2AQ9Y2K7 1162 aa19.3■□□□□ 0.68
RPS6KC1-202ENST00000366960 ARXQ96QS3 562 aa19.3■□□□□ 0.68
RPS6KC1-202ENST00000366960 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.3■□□□□ 0.684e-7■□□□□ 10.7
RPS6KC1-202ENST00000366960 SCRIBQ14160 1630 aa19.29■□□□□ 0.68
RPS6KC1-202ENST00000366960 SENP3-EIF4A1A0A087X0R7 540 aa19.28■□□□□ 0.68
RPS6KC1-202ENST00000366960 MYO15BQ96JP2 1530 aa19.24■□□□□ 0.67
RPS6KC1-202ENST00000366960 UPF2Q9HAU5 1272 aaKnown RBP19.24■□□□□ 0.67
RPS6KC1-202ENST00000366960 PLPPR3Q6T4P5 718 aa19.21■□□□□ 0.67
RPS6KC1-202ENST00000366960 ANP32BQ92688 251 aaKnown RBP19.19■□□□□ 0.66
RPS6KC1-202ENST00000366960 STAG3Q9UJ98 1225 aa19.19■□□□□ 0.66
RPS6KC1-202ENST00000366960 RRP7BPQ9NSQ0 103 aa19.16■□□□□ 0.66
RPS6KC1-202ENST00000366960 WDR43Q15061 677 aaKnown RBP eCLIP19.15■□□□□ 0.66
RPS6KC1-202ENST00000366960 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.14■□□□□ 0.65
RPS6KC1-202ENST00000366960 CLIP1P30622 1438 aa19.13■□□□□ 0.65
RPS6KC1-202ENST00000366960 SENP3Q9H4L4 574 aaPredicted RBP19.13■□□□□ 0.65
RPS6KC1-202ENST00000366960 MTUS2Q5JR59 1369 aa19.13■□□□□ 0.65
RPS6KC1-202ENST00000366960 ZCCHC6Q5VYS8 1495 aaKnown RBP19.13■□□□□ 0.65
RPS6KC1-202ENST00000366960 ESF1Q9H501 851 aaKnown RBP19.11■□□□□ 0.65
RPS6KC1-202ENST00000366960 EIF4G2P78344 907 aaKnown RBP eCLIP19.1■□□□□ 0.65
RPS6KC1-202ENST00000366960 TSPY4P0CV99 314 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms