RNA–Protein interactions for RNA: ENST00000366553.2

CHML-201, Transcript of CHM like, Rab escort protein 2, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CHML, Length 7,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHML-201ENST00000366553 DCAF8L2P0C7V8 631 aa19.83■□□□□ 0.77
CHML-201ENST00000366553 NISCHQ9Y2I1 1504 aa19.77■□□□□ 0.76
CHML-201ENST00000366553 SUPT5HO00267 1087 aaKnown RBP19.11■□□□□ 0.65
CHML-201ENST00000366553 SHROOM4Q9ULL8 1493 aa19■□□□□ 0.63
CHML-201ENST00000366553 EHMT2Q96KQ7 1210 aa18.5■□□□□ 0.55
CHML-201ENST00000366553 FAM9AQ8IZU1 332 aaPredicted RBP17.99■□□□□ 0.47
CHML-201ENST00000366553 PCGF6Q9BYE7 350 aa17.97■□□□□ 0.47
CHML-201ENST00000366553 TTBK1Q5TCY1 1321 aaPredicted RBP17.85■□□□□ 0.45
CHML-201ENST00000366553 APLP2Q06481 763 aa17.66■□□□□ 0.42
CHML-201ENST00000366553 TRIM41Q8WV44 630 aa17.62■□□□□ 0.41
CHML-201ENST00000366553 RANGAP1P46060 587 aaPredicted RBP17.57■□□□□ 0.4
CHML-201ENST00000366553 CCER1Q8TC90 406 aaPredicted RBP17.42■□□□□ 0.38
CHML-201ENST00000366553 PPARGC1BQ86YN6 1023 aaKnown RBP17.4■□□□□ 0.38
CHML-201ENST00000366553 PELP1Q8IZL8 1130 aaKnown RBP17.34■□□□□ 0.37
CHML-201ENST00000366553 UBTFP17480 764 aaKnown RBP17.32■□□□□ 0.36
CHML-201ENST00000366553 ZEB1P37275 1124 aaPredicted RBP17.32■□□□□ 0.36
CHML-201ENST00000366553 LOC105371045A0A1W2PR82 267 aa17.27■□□□□ 0.36
CHML-201ENST00000366553 ATP1B4Q9UN42 357 aaPredicted RBP17.25■□□□□ 0.35
CHML-201ENST00000366553 CHIC1Q5VXU3 224 aa17.16■□□□□ 0.34
CHML-201ENST00000366553 CENPBP07199 599 aaPredicted RBP17.16■□□□□ 0.34
CHML-201ENST00000366553 TRIM26Q12899 539 aaPredicted RBP17.16■□□□□ 0.34
CHML-201ENST00000366553 HRCP23327 699 aa17.09■□□□□ 0.33
CHML-201ENST00000366553 YTHDC1Q96MU7 727 aaKnown RBP17.08■□□□□ 0.32
CHML-201ENST00000366553 ITGAEP38570 1179 aa16.84■□□□□ 0.29
CHML-201ENST00000366553 HNRNPUL2Q1KMD3 747 aaKnown RBP16.79■□□□□ 0.28
CHML-201ENST00000366553 ABCC9O60706 1549 aa16.76■□□□□ 0.27
CHML-201ENST00000366553 ERICH6Q7L0X2 663 aa16.75■□□□□ 0.27
CHML-201ENST00000366553 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.75■□□□□ 0.27
CHML-201ENST00000366553 NEFLP07196 543 aa16.67■□□□□ 0.26
CHML-201ENST00000366553 PABPN1Q86U42 306 aaKnown RBP eCLIP16.62■□□□□ 0.25
CHML-201ENST00000366553 DIEXFQ68CQ4 756 aaKnown RBP16.54■□□□□ 0.24
CHML-201ENST00000366553 POLR3GLQ9BT43 218 aa16.5■□□□□ 0.23
CHML-201ENST00000366553 SCRIBQ14160 1630 aa16.49■□□□□ 0.23
CHML-201ENST00000366553 CNGB1Q14028 1251 aaPredicted RBP16.49■□□□□ 0.23
CHML-201ENST00000366553 ZCCHC6Q5VYS8 1495 aaKnown RBP16.4■□□□□ 0.22
CHML-201ENST00000366553 FAM50AQ14320 339 aaKnown RBP16.39■□□□□ 0.21
CHML-201ENST00000366553 CCDC180Q9P1Z9 1646 aa16.36■□□□□ 0.21
CHML-201ENST00000366553 MYT1LQ9UL68 1186 aa16.31■□□□□ 0.2
CHML-201ENST00000366553 NEUROD1Q13562 356 aa16.31■□□□□ 0.2
CHML-201ENST00000366553 MYT1Q01538 1121 aa16.24■□□□□ 0.19
CHML-201ENST00000366553 GTF3C3Q9Y5Q9 886 aa16.24■□□□□ 0.19
CHML-201ENST00000366553 MYO15BQ96JP2 1530 aa16.19■□□□□ 0.18
CHML-201ENST00000366553 TRIM52Q96A61 297 aa16.17■□□□□ 0.18
CHML-201ENST00000366553 ZNF316A6NFI3 1004 aaPredicted RBP16.14■□□□□ 0.17
CHML-201ENST00000366553 CSRNP3Q8WYN3 585 aa16.14■□□□□ 0.17
CHML-201ENST00000366553 DCAF1Q9Y4B6 1507 aa16.13■□□□□ 0.17
CHML-201ENST00000366553 P3H3Q8IVL6 736 aa16.13■□□□□ 0.17
CHML-201ENST00000366553 BCANQ96GW7 911 aa16.11■□□□□ 0.17
CHML-201ENST00000366553 SLC4A1APQ9BWU0 796 aaKnown RBP16.06■□□□□ 0.16
CHML-201ENST00000366553 DAXXQ9UER7 740 aaPredicted RBP16.05■□□□□ 0.16
CHML-201ENST00000366553 ARID3CA6NKF2 412 aa16.01■□□□□ 0.15
CHML-201ENST00000366553 ANP32CO43423 234 aa16■□□□□ 0.15
CHML-201ENST00000366553 ACIN1Q9UKV3 1341 aaKnown RBP15.99■□□□□ 0.15
CHML-201ENST00000366553 ZNF326Q5BKZ1 582 aaKnown RBP15.99■□□□□ 0.15
CHML-201ENST00000366553 FBLN2P98095 1184 aa15.96■□□□□ 0.15
CHML-201ENST00000366553 CLSPNQ9HAW4 1339 aa15.83■□□□□ 0.12
CHML-201ENST00000366553 RSF1Q96T23 1441 aaPredicted RBP15.83■□□□□ 0.12
CHML-201ENST00000366553 CDK11AQ9UQ88 783 aaPredicted RBP15.78■□□□□ 0.12
CHML-201ENST00000366553 ZNF777Q9ULD5 760 aaPredicted RBP15.77■□□□□ 0.12
CHML-201ENST00000366553 RB1CC1Q8TDY2 1594 aa15.77■□□□□ 0.11
CHML-201ENST00000366553 RTL5Q5HYW3 569 aaPredicted RBP15.75■□□□□ 0.11
CHML-201ENST00000366553 DDX10Q13206 875 aaKnown RBP15.75■□□□□ 0.11
CHML-201ENST00000366553 SCAF1Q9H7N4 1312 aaKnown RBP15.71■□□□□ 0.11
CHML-201ENST00000366553 FKBP8Q14318 412 aa15.69■□□□□ 0.1
CHML-201ENST00000366553 TONSLQ96HA7 1378 aa15.68■□□□□ 0.1
CHML-201ENST00000366553 MIER1Q8N108 512 aa15.67■□□□□ 0.1
CHML-201ENST00000366553 CLIP1P30622 1438 aa15.67■□□□□ 0.1
CHML-201ENST00000366553 CEP162Q5TB80 1403 aa15.67■□□□□ 0.1
CHML-201ENST00000366553 NACADO15069 1562 aa15.66■□□□□ 0.1
CHML-201ENST00000366553 HIRIP3Q9BW71 556 aaPredicted RBP15.66■□□□□ 0.1
CHML-201ENST00000366553 CHIC2Q9UKJ5 165 aa15.66■□□□□ 0.1
CHML-201ENST00000366553 HNRNPUQ00839 825 aaKnown RBP eCLIP15.6■□□□□ 0.09
CHML-201ENST00000366553 GOLGA3Q08378 1498 aa15.6■□□□□ 0.09
CHML-201ENST00000366553 FAM9BQ8IZU0 186 aa15.6■□□□□ 0.09
CHML-201ENST00000366553 BCL11AQ9H165 835 aa15.58■□□□□ 0.09
CHML-201ENST00000366553 CECR2Q9BXF3 1484 aa15.57■□□□□ 0.08
CHML-201ENST00000366553 SALL2Q9Y467 1007 aaPredicted RBP15.55■□□□□ 0.08
CHML-201ENST00000366553 CANXP27824 592 aaKnown RBP15.53■□□□□ 0.08
CHML-201ENST00000366553 WRNQ14191 1432 aaPredicted RBP eCLIP15.53■□□□□ 0.08
CHML-201ENST00000366553 NPM2Q86SE8 214 aaKnown RBP15.52■□□□□ 0.07
CHML-201ENST00000366553 BAZ1BQ9UIG0 1483 aaKnown RBP15.51■□□□□ 0.07
CHML-201ENST00000366553 MTUS2Q5JR59 1369 aa15.51■□□□□ 0.07
CHML-201ENST00000366553 BAZ1AQ9NRL2 1556 aaPredicted RBP15.48■□□□□ 0.07
CHML-201ENST00000366553 EEA1Q15075 1411 aa15.48■□□□□ 0.07
CHML-201ENST00000366553 ABCC8Q09428 1581 aa15.48■□□□□ 0.07
CHML-201ENST00000366553 WIZO95785 1651 aa15.47■□□□□ 0.07
CHML-201ENST00000366553 IRX6P78412 446 aaPredicted RBP15.47■□□□□ 0.07
CHML-201ENST00000366553 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.47■□□□□ 0.07
CHML-201ENST00000366553 RRP7BPQ9NSQ0 103 aa15.46■□□□□ 0.07
CHML-201ENST00000366553 KDM2AQ9Y2K7 1162 aa15.46■□□□□ 0.07
CHML-201ENST00000366553 ANP32AP39687 249 aaKnown RBP15.45■□□□□ 0.06
CHML-201ENST00000366553 TNIKQ9UKE5 1360 aa15.45■□□□□ 0.06
CHML-201ENST00000366553 SLC24A1O60721 1099 aa15.44■□□□□ 0.06
CHML-201ENST00000366553 CEP164Q9UPV0 1460 aa15.43■□□□□ 0.06
CHML-201ENST00000366553 MROH2BQ7Z745 1585 aa15.42■□□□□ 0.06
CHML-201ENST00000366553 SOGA1O94964 1423 aa15.42■□□□□ 0.06
CHML-201ENST00000366553 CHGAP10645 457 aaKnown RBP15.42■□□□□ 0.06
CHML-201ENST00000366553 TMC1Q8TDI8 760 aa15.41■□□□□ 0.06
CHML-201ENST00000366553 ZBTB47Q9UFB7 747 aaPredicted RBP15.39■□□□□ 0.05
CHML-201ENST00000366553 MRS2Q9HD23 443 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms