RNA–Protein interactions for RNA: ENST00000362556.1

RNU1-108P-201, Transcript of RNA, U1 small nuclear 108, pseudogene, humanhuman

BASIC

Gene RNU1-108P, Length 161 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-108P-201ENST00000362556 CHIC1Q5VXU3 224 aa11.08□□□□□ -0.64
RNU1-108P-201ENST00000362556 AEBP2Q6ZN18 517 aaPredicted RBP10.96□□□□□ -0.65
RNU1-108P-201ENST00000362556 PHF23Q9BUL5 403 aaPredicted RBP9.87□□□□□ -0.83
RNU1-108P-201ENST00000362556 PLPPR3Q6T4P5 718 aa9.13□□□□□ -0.95
RNU1-108P-201ENST00000362556 SENP3Q9H4L4 574 aaPredicted RBP9.07□□□□□ -0.96
RNU1-108P-201ENST00000362556 ADRA2BP18089 450 aa8.65□□□□□ -1.02
RNU1-108P-201ENST00000362556 PPP6R1Q9UPN7 881 aa8.55□□□□□ -1.04
RNU1-108P-201ENST00000362556 KCNA4P22459 653 aa8.54□□□□□ -1.04
RNU1-108P-201ENST00000362556 FOXD1Q16676 465 aa8.45□□□□□ -1.06
RNU1-108P-201ENST00000362556 EHMT2Q96KQ7 1210 aa8.43□□□□□ -1.06
RNU1-108P-201ENST00000362556 NISCHQ9Y2I1 1504 aa8.34□□□□□ -1.08
RNU1-108P-201ENST00000362556 CSRNP3Q8WYN3 585 aa8.23□□□□□ -1.09
RNU1-108P-201ENST00000362556 PPP4R3CPQ6ZMV5 832 aa8.14□□□□□ -1.11
RNU1-108P-201ENST00000362556 SLC4A1APQ9BWU0 796 aaKnown RBP8.13□□□□□ -1.11
RNU1-108P-201ENST00000362556 PIAS4Q8N2W9 510 aaPredicted RBP7.99□□□□□ -1.13
RNU1-108P-201ENST00000362556 NPM3O75607 178 aaKnown RBP7.98□□□□□ -1.13
RNU1-108P-201ENST00000362556 NCBP3Q53F19 620 aaKnown RBP7.96□□□□□ -1.14
RNU1-108P-201ENST00000362556 ZBTB22O15209 634 aa7.93□□□□□ -1.14
RNU1-108P-201ENST00000362556 CNKSR2Q8WXI2 1034 aa7.78□□□□□ -1.16
RNU1-108P-201ENST00000362556 DNAJC5BQ9UF47 199 aa7.74□□□□□ -1.17
RNU1-108P-201ENST00000362556 FOXD4L1Q9NU39 408 aa7.66□□□□□ -1.18
RNU1-108P-201ENST00000362556 SCAF1Q9H7N4 1312 aaKnown RBP7.63□□□□□ -1.19
RNU1-108P-201ENST00000362556 MAPK8IP2Q13387 824 aaPredicted RBP7.6□□□□□ -1.19
RNU1-108P-201ENST00000362556 RTN4Q9NQC3 1192 aaKnown RBP7.56□□□□□ -1.2
RNU1-108P-201ENST00000362556 RNF216Q9NWF9 866 aaPredicted RBP7.53□□□□□ -1.2
RNU1-108P-201ENST00000362556 SLC24A1O60721 1099 aa7.52□□□□□ -1.21
RNU1-108P-201ENST00000362556 MSH5O43196 834 aa7.49□□□□□ -1.21
RNU1-108P-201ENST00000362556 PELP1Q8IZL8 1130 aaKnown RBP7.49□□□□□ -1.21
RNU1-108P-201ENST00000362556 SLC4A2P04920 1241 aa7.48□□□□□ -1.21
RNU1-108P-201ENST00000362556 AMER1Q5JTC6 1135 aaPredicted RBP7.46□□□□□ -1.22
RNU1-108P-201ENST00000362556 HOXD11P31277 338 aaPredicted RBP7.42□□□□□ -1.22
RNU1-108P-201ENST00000362556 HRCP23327 699 aa7.39□□□□□ -1.23
RNU1-108P-201ENST00000362556 DMRT2Q9Y5R5 561 aa7.37□□□□□ -1.23
RNU1-108P-201ENST00000362556 MYT1Q01538 1121 aa7.35□□□□□ -1.23
RNU1-108P-201ENST00000362556 ATXN8OSP0DMR3 200 aa7.34□□□□□ -1.23
RNU1-108P-201ENST00000362556 FKBP8Q14318 412 aa7.31□□□□□ -1.24
RNU1-108P-201ENST00000362556 MYCNP04198 464 aaPredicted RBP7.29□□□□□ -1.24
RNU1-108P-201ENST00000362556 DCAF1Q9Y4B6 1507 aa7.22□□□□□ -1.25
RNU1-108P-201ENST00000362556 ZEB1P37275 1124 aaPredicted RBP7.2□□□□□ -1.26
RNU1-108P-201ENST00000362556 ATF5Q9Y2D1 282 aaPredicted RBP7.19□□□□□ -1.26
RNU1-108P-201ENST00000362556 ZCCHC6Q5VYS8 1495 aaKnown RBP7.13□□□□□ -1.27
RNU1-108P-201ENST00000362556 CCDC180Q9P1Z9 1646 aa7.11□□□□□ -1.27
RNU1-108P-201ENST00000362556 TRIM26Q12899 539 aaPredicted RBP7.06□□□□□ -1.28
RNU1-108P-201ENST00000362556 PCGF6Q9BYE7 350 aa7.04□□□□□ -1.28
RNU1-108P-201ENST00000362556 SUPT5HO00267 1087 aaKnown RBP7.01□□□□□ -1.29
RNU1-108P-201ENST00000362556 U3KPZ7 1027 aaPredicted RBP7.01□□□□□ -1.29
RNU1-108P-201ENST00000362556 MYO15BQ96JP2 1530 aa7□□□□□ -1.29
RNU1-108P-201ENST00000362556 SAMD1Q6SPF0 538 aaPredicted RBP6.97□□□□□ -1.29
RNU1-108P-201ENST00000362556 TTBK1Q5TCY1 1321 aaPredicted RBP6.97□□□□□ -1.29
RNU1-108P-201ENST00000362556 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.95□□□□□ -1.3
RNU1-108P-201ENST00000362556 SHROOM4Q9ULL8 1493 aa6.94□□□□□ -1.3
RNU1-108P-201ENST00000362556 PROM2Q8N271 834 aa6.94□□□□□ -1.3
RNU1-108P-201ENST00000362556 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.93□□□□□ -1.3
RNU1-108P-201ENST00000362556 HNRNPUL2Q1KMD3 747 aaKnown RBP6.93□□□□□ -1.3
RNU1-108P-201ENST00000362556 PLCB2Q00722 1185 aa6.91□□□□□ -1.3
RNU1-108P-201ENST00000362556 ZNF219Q9P2Y4 722 aaPredicted RBP6.91□□□□□ -1.3
RNU1-108P-201ENST00000362556 MKRN4PQ13434 485 aaPredicted RBP6.9□□□□□ -1.3
RNU1-108P-201ENST00000362556 DCAF8L1A6NGE4 600 aa6.88□□□□□ -1.31
RNU1-108P-201ENST00000362556 PPARGC1BQ86YN6 1023 aaKnown RBP6.88□□□□□ -1.31
RNU1-108P-201ENST00000362556 CENPBP07199 599 aaPredicted RBP6.86□□□□□ -1.31
RNU1-108P-201ENST00000362556 SPDYE4A6NLX3 237 aa6.85□□□□□ -1.31
RNU1-108P-201ENST00000362556 FBXO3Q9UK99 471 aa6.85□□□□□ -1.31
RNU1-108P-201ENST00000362556 ACIN1Q9UKV3 1341 aaKnown RBP6.83□□□□□ -1.32
RNU1-108P-201ENST00000362556 VASPP50552 380 aaPredicted RBP6.83□□□□□ -1.32
RNU1-108P-201ENST00000362556 IFNLR1Q8IU57 520 aaPredicted RBP6.83□□□□□ -1.32
RNU1-108P-201ENST00000362556 CLSPNQ9HAW4 1339 aa6.82□□□□□ -1.32
RNU1-108P-201ENST00000362556 PKD2Q13563 968 aa6.8□□□□□ -1.32
RNU1-108P-201ENST00000362556 ABCC9O60706 1549 aa6.76□□□□□ -1.33
RNU1-108P-201ENST00000362556 HAP1P54257 671 aaPredicted RBP6.74□□□□□ -1.33
RNU1-108P-201ENST00000362556 PRKCSHP14314 528 aaPredicted RBP6.73□□□□□ -1.33
RNU1-108P-201ENST00000362556 LOC105371045A0A1W2PR82 267 aa6.71□□□□□ -1.34
RNU1-108P-201ENST00000362556 RB1CC1Q8TDY2 1594 aa6.7□□□□□ -1.34
RNU1-108P-201ENST00000362556 APLP2Q06481 763 aa6.7□□□□□ -1.34
RNU1-108P-201ENST00000362556 VSIG10Q8N0Z9 540 aa6.7□□□□□ -1.34
RNU1-108P-201ENST00000362556 KDM2AQ9Y2K7 1162 aa6.69□□□□□ -1.34
RNU1-108P-201ENST00000362556 WRNQ14191 1432 aaPredicted RBP eCLIP6.68□□□□□ -1.34
RNU1-108P-201ENST00000362556 BCANQ96GW7 911 aa6.68□□□□□ -1.34
RNU1-108P-201ENST00000362556 TAOK2Q9UL54 1235 aa6.68□□□□□ -1.34
RNU1-108P-201ENST00000362556 NPM1P06748 294 aaKnown RBP eCLIP6.67□□□□□ -1.34
RNU1-108P-201ENST00000362556 DIEXFQ68CQ4 756 aaKnown RBP6.67□□□□□ -1.34
RNU1-108P-201ENST00000362556 SPINK5Q9NQ38 1064 aaPredicted RBP6.67□□□□□ -1.34
RNU1-108P-201ENST00000362556 FBLN2P98095 1184 aa6.66□□□□□ -1.34
RNU1-108P-201ENST00000362556 NEUROD1Q13562 356 aa6.66□□□□□ -1.34
RNU1-108P-201ENST00000362556 TRIM41Q8WV44 630 aa6.66□□□□□ -1.34
RNU1-108P-201ENST00000362556 POLA2Q14181 598 aa6.65□□□□□ -1.34
RNU1-108P-201ENST00000362556 GTF3C3Q9Y5Q9 886 aa6.65□□□□□ -1.34
RNU1-108P-201ENST00000362556 RSF1Q96T23 1441 aaPredicted RBP6.65□□□□□ -1.35
RNU1-108P-201ENST00000362556 DCAF8L2P0C7V8 631 aa6.63□□□□□ -1.35
RNU1-108P-201ENST00000362556 BBXQ8WY36 941 aaPredicted RBP6.62□□□□□ -1.35
RNU1-108P-201ENST00000362556 CCER1Q8TC90 406 aaPredicted RBP6.61□□□□□ -1.35
RNU1-108P-201ENST00000362556 EEA1Q15075 1411 aa6.6□□□□□ -1.35
RNU1-108P-201ENST00000362556 ZNF316A6NFI3 1004 aaPredicted RBP6.6□□□□□ -1.35
RNU1-108P-201ENST00000362556 TRHP20396 242 aaPredicted RBP6.6□□□□□ -1.35
RNU1-108P-201ENST00000362556 SPOCK2Q92563 424 aa6.58□□□□□ -1.36
RNU1-108P-201ENST00000362556 RGL2O15211 777 aa6.56□□□□□ -1.36
RNU1-108P-201ENST00000362556 ECM2O94769 699 aaPredicted RBP6.55□□□□□ -1.36
RNU1-108P-201ENST00000362556 TPRNQ4KMQ1 711 aa6.55□□□□□ -1.36
RNU1-108P-201ENST00000362556 PAXIP1Q6ZW49 1069 aaPredicted RBP6.55□□□□□ -1.36
RNU1-108P-201ENST00000362556 RNF39Q9H2S5 420 aa6.55□□□□□ -1.36
RNU1-108P-201ENST00000362556 TNIKQ9UKE5 1360 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms