RNA–Protein interactions for RNA: ENST00000362095.9

PCDH11Y-203, Transcript of protocadherin 11 Y-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11Y, Length 4,220 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11Y-203ENST00000362095 AEBP2Q6ZN18 517 aaPredicted RBP7.07□□□□□ -1.28
PCDH11Y-203ENST00000362095 CHIC1Q5VXU3 224 aa6.77□□□□□ -1.33
PCDH11Y-203ENST00000362095 PHF23Q9BUL5 403 aaPredicted RBP6.04□□□□□ -1.44
PCDH11Y-203ENST00000362095 SENP3Q9H4L4 574 aaPredicted RBP5.81□□□□□ -1.48
PCDH11Y-203ENST00000362095 FOXD1Q16676 465 aa5.49□□□□□ -1.53
PCDH11Y-203ENST00000362095 PLPPR3Q6T4P5 718 aa5.3□□□□□ -1.56
PCDH11Y-203ENST00000362095 PPP6R1Q9UPN7 881 aa5.23□□□□□ -1.57
PCDH11Y-203ENST00000362095 ADRA2BP18089 450 aa5.05□□□□□ -1.6
PCDH11Y-203ENST00000362095 MSH5O43196 834 aa5.01□□□□□ -1.61
PCDH11Y-203ENST00000362095 CCDC180Q9P1Z9 1646 aa5□□□□□ -1.61
PCDH11Y-203ENST00000362095 DNAJC5BQ9UF47 199 aa4.99□□□□□ -1.61
PCDH11Y-203ENST00000362095 UNC13AQ9UPW8 1703 aa4.93□□□□□ -1.62
PCDH11Y-203ENST00000362095 PIAS4Q8N2W9 510 aaPredicted RBP4.88□□□□□ -1.63
PCDH11Y-203ENST00000362095 NISCHQ9Y2I1 1504 aa4.86□□□□□ -1.63
PCDH11Y-203ENST00000362095 DMRT2Q9Y5R5 561 aa4.78□□□□□ -1.64
PCDH11Y-203ENST00000362095 POTEDQ86YR6 584 aa4.74□□□□□ -1.65
PCDH11Y-203ENST00000362095 HOXD11P31277 338 aaPredicted RBP4.74□□□□□ -1.65
PCDH11Y-203ENST00000362095 SHROOM4Q9ULL8 1493 aa4.72□□□□□ -1.65
PCDH11Y-203ENST00000362095 BICRAQ9NZM4 1560 aa4.71□□□□□ -1.66
PCDH11Y-203ENST00000362095 MYO15BQ96JP2 1530 aa4.66□□□□□ -1.66
PCDH11Y-203ENST00000362095 PPP4R3CPQ6ZMV5 832 aa4.65□□□□□ -1.67
PCDH11Y-203ENST00000362095 MAPK8IP2Q13387 824 aaPredicted RBP4.63□□□□□ -1.67
PCDH11Y-203ENST00000362095 RNF216Q9NWF9 866 aaPredicted RBP4.62□□□□□ -1.67
PCDH11Y-203ENST00000362095 CNKSR2Q8WXI2 1034 aa4.6□□□□□ -1.67
PCDH11Y-203ENST00000362095 DNAJC5Q9H3Z4 198 aa4.56□□□□□ -1.68
PCDH11Y-203ENST00000362095 RB1CC1Q8TDY2 1594 aa4.53□□□□□ -1.68
PCDH11Y-203ENST00000362095 NPM3O75607 178 aaKnown RBP4.52□□□□□ -1.69
PCDH11Y-203ENST00000362095 NACADO15069 1562 aa4.52□□□□□ -1.69
PCDH11Y-203ENST00000362095 SCAF1Q9H7N4 1312 aaKnown RBP4.51□□□□□ -1.69
PCDH11Y-203ENST00000362095 CUX2O14529 1486 aa4.48□□□□□ -1.69
PCDH11Y-203ENST00000362095 THOC2Q8NI27 1593 aaKnown RBP4.46□□□□□ -1.69
PCDH11Y-203ENST00000362095 ABCC9O60706 1549 aa4.46□□□□□ -1.7
PCDH11Y-203ENST00000362095 CC2D2AQ9P2K1 1620 aa4.45□□□□□ -1.7
PCDH11Y-203ENST00000362095 KCNA4P22459 653 aa4.45□□□□□ -1.7
PCDH11Y-203ENST00000362095 RNF39Q9H2S5 420 aa4.43□□□□□ -1.7
PCDH11Y-203ENST00000362095 SLC4A2P04920 1241 aa4.4□□□□□ -1.7
PCDH11Y-203ENST00000362095 DCAF1Q9Y4B6 1507 aa4.37□□□□□ -1.71
PCDH11Y-203ENST00000362095 EIF4G1Q04637 1599 aaKnown RBP4.37□□□□□ -1.71
PCDH11Y-203ENST00000362095 NCBP3Q53F19 620 aaKnown RBP4.37□□□□□ -1.71
PCDH11Y-203ENST00000362095 EHMT2Q96KQ7 1210 aa4.35□□□□□ -1.71
PCDH11Y-203ENST00000362095 PRKCSHP14314 528 aaPredicted RBP4.34□□□□□ -1.72
PCDH11Y-203ENST00000362095 CSRNP3Q8WYN3 585 aa4.33□□□□□ -1.72
PCDH11Y-203ENST00000362095 ZBTB22O15209 634 aa4.29□□□□□ -1.72
PCDH11Y-203ENST00000362095 U3KPZ7 1027 aaPredicted RBP4.27□□□□□ -1.73
PCDH11Y-203ENST00000362095 PEG3Q9GZU2 1588 aa4.27□□□□□ -1.73
PCDH11Y-203ENST00000362095 C1QBPQ07021 282 aaKnown RBP4.26□□□□□ -1.73
PCDH11Y-203ENST00000362095 PRDM2Q13029 1718 aa4.25□□□□□ -1.73
PCDH11Y-203ENST00000362095 SLC24A1O60721 1099 aa4.22□□□□□ -1.73
PCDH11Y-203ENST00000362095 KIF21AQ7Z4S6 1674 aa4.21□□□□□ -1.74
PCDH11Y-203ENST00000362095 CECR2Q9BXF3 1484 aa4.21□□□□□ -1.74
PCDH11Y-203ENST00000362095 HMGXB3Q12766 1538 aa4.2□□□□□ -1.74
PCDH11Y-203ENST00000362095 WDR62O43379 1518 aa4.19□□□□□ -1.74
PCDH11Y-203ENST00000362095 RIMBP3CA6NJZ7 1639 aa4.19□□□□□ -1.74
PCDH11Y-203ENST00000362095 RIMBP3BA6NNM3 1639 aa4.19□□□□□ -1.74
PCDH11Y-203ENST00000362095 RIMBP3Q9UFD9 1639 aa4.19□□□□□ -1.74
PCDH11Y-203ENST00000362095 ATXN8OSP0DMR3 200 aa4.17□□□□□ -1.74
PCDH11Y-203ENST00000362095 BAZ1AQ9NRL2 1556 aaPredicted RBP4.15□□□□□ -1.74
PCDH11Y-203ENST00000362095 SMARCA2P51531 1590 aa4.15□□□□□ -1.75
PCDH11Y-203ENST00000362095 SLC4A1APQ9BWU0 796 aaKnown RBP4.14□□□□□ -1.75
PCDH11Y-203ENST00000362095 SCRIBQ14160 1630 aa4.14□□□□□ -1.75
PCDH11Y-203ENST00000362095 LAMC3Q9Y6N6 1575 aa4.14□□□□□ -1.75
PCDH11Y-203ENST00000362095 PLEKHG5O94827 1062 aa4.13□□□□□ -1.75
PCDH11Y-203ENST00000362095 KIF13AQ9H1H9 1805 aa4.13□□□□□ -1.75
PCDH11Y-203ENST00000362095 DSG3P32926 999 aa4.13□□□□□ -1.75
PCDH11Y-203ENST00000362095 ATF5Q9Y2D1 282 aaPredicted RBP4.12□□□□□ -1.75
PCDH11Y-203ENST00000362095 FOXD4L1Q9NU39 408 aa4.1□□□□□ -1.75
PCDH11Y-203ENST00000362095 MYCNP04198 464 aaPredicted RBP4.1□□□□□ -1.75
PCDH11Y-203ENST00000362095 NCAPD3P42695 1498 aa4.09□□□□□ -1.76
PCDH11Y-203ENST00000362095 WDR97A6NE52 1622 aa4.07□□□□□ -1.76
PCDH11Y-203ENST00000362095 ZCCHC6Q5VYS8 1495 aaKnown RBP4.06□□□□□ -1.76
PCDH11Y-203ENST00000362095 CLASP1Q7Z460 1538 aa4.05□□□□□ -1.76
PCDH11Y-203ENST00000362095 PROM2Q8N271 834 aa4.05□□□□□ -1.76
PCDH11Y-203ENST00000362095 SPINK5Q9NQ38 1064 aaPredicted RBP4.03□□□□□ -1.76
PCDH11Y-203ENST00000362095 CHD1O14646 1710 aa4.01□□□□□ -1.77
PCDH11Y-203ENST00000362095 PPRC1Q5VV67 1664 aaKnown RBP4.01□□□□□ -1.77
PCDH11Y-203ENST00000362095 SAMD1Q6SPF0 538 aaPredicted RBP4□□□□□ -1.77
PCDH11Y-203ENST00000362095 SHROOM2Q13796 1616 aa4□□□□□ -1.77
PCDH11Y-203ENST00000362095 SMARCA4P51532 1647 aa4□□□□□ -1.77
PCDH11Y-203ENST00000362095 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP3.99□□□□□ -1.77
PCDH11Y-203ENST00000362095 MKRN4PQ13434 485 aaPredicted RBP3.99□□□□□ -1.77
PCDH11Y-203ENST00000362095 HNRNPUL2Q1KMD3 747 aaKnown RBP3.99□□□□□ -1.77
PCDH11Y-203ENST00000362095 FAM9AQ8IZU1 332 aaPredicted RBP3.99□□□□□ -1.77
PCDH11Y-203ENST00000362095 RTN4Q9NQC3 1192 aaKnown RBP3.98□□□□□ -1.77
PCDH11Y-203ENST00000362095 ERCC6L2Q5T890 1561 aa3.98□□□□□ -1.77
PCDH11Y-203ENST00000362095 ARHGEF11O15085 1522 aa3.98□□□□□ -1.77
PCDH11Y-203ENST00000362095 KDM6BO15054 1643 aa3.97□□□□□ -1.77
PCDH11Y-203ENST00000362095 TARBP1Q13395 1621 aaKnown RBP3.97□□□□□ -1.77
PCDH11Y-203ENST00000362095 NESP48681 1621 aa3.97□□□□□ -1.77
PCDH11Y-203ENST00000362095 GRWD1Q9BQ67 446 aaKnown RBP eCLIP3.97□□□□□ -1.77
PCDH11Y-203ENST00000362095 APLP2Q06481 763 aa3.96□□□□□ -1.78
PCDH11Y-203ENST00000362095 ARAP1Q96P48 1450 aa3.94□□□□□ -1.78
PCDH11Y-203ENST00000362095 ZNF219Q9P2Y4 722 aaPredicted RBP3.94□□□□□ -1.78
PCDH11Y-203ENST00000362095 CACNB1Q02641 598 aaPredicted RBP3.93□□□□□ -1.78
PCDH11Y-203ENST00000362095 BCL11AQ9H165 835 aa3.92□□□□□ -1.78
PCDH11Y-203ENST00000362095 SSUH2Q9Y2M2 353 aa3.91□□□□□ -1.78
PCDH11Y-203ENST00000362095 ATAD2BQ9ULI0 1458 aa3.91□□□□□ -1.78
PCDH11Y-203ENST00000362095 RSF1Q96T23 1441 aaPredicted RBP3.9□□□□□ -1.78
PCDH11Y-203ENST00000362095 MRC2Q9UBG0 1479 aa3.89□□□□□ -1.79
PCDH11Y-203ENST00000362095 EIF4G3O43432 1585 aaKnown RBP3.89□□□□□ -1.79
PCDH11Y-203ENST00000362095 KLHL34Q8N239 644 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms