RNA–Protein interactions for RNA: ENST00000358130.6

HMGN5-201, Transcript of high mobility group nucleosome binding domain 5, humanhuman

APPRIS P2 TSL 2 BASIC

Gene HMGN5, Length 2,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN5-201ENST00000358130 AEBP2Q6ZN18 517 aaPredicted RBP17.17■□□□□ 0.34
HMGN5-201ENST00000358130 POTEDQ86YR6 584 aa16.63■□□□□ 0.25
HMGN5-201ENST00000358130 CHIC1Q5VXU3 224 aa16.3■□□□□ 0.2
HMGN5-201ENST00000358130 SENP3Q9H4L4 574 aaPredicted RBP15.19■□□□□ 0.02
HMGN5-201ENST00000358130 PHF23Q9BUL5 403 aaPredicted RBP14.62□□□□□ -0.07
HMGN5-201ENST00000358130 FOXD1Q16676 465 aa14.19□□□□□ -0.14
HMGN5-201ENST00000358130 MSH5O43196 834 aa14.18□□□□□ -0.14
HMGN5-201ENST00000358130 CACNB1Q02641 598 aaPredicted RBP13.13□□□□□ -0.31
HMGN5-201ENST00000358130 PIAS4Q8N2W9 510 aaPredicted RBP12.86□□□□□ -0.35
HMGN5-201ENST00000358130 POTEHQ6S545 545 aa12.71□□□□□ -0.38
HMGN5-201ENST00000358130 PLPPR3Q6T4P5 718 aa12.01□□□□□ -0.49
HMGN5-201ENST00000358130 RNF39Q9H2S5 420 aa11.81□□□□□ -0.52
HMGN5-201ENST00000358130 PPP6R1Q9UPN7 881 aa11.8□□□□□ -0.52
HMGN5-201ENST00000358130 DMRT2Q9Y5R5 561 aa11.74□□□□□ -0.53
HMGN5-201ENST00000358130 ADRA2BP18089 450 aa11.7□□□□□ -0.54
HMGN5-201ENST00000358130 C1QBPQ07021 282 aaKnown RBP11.65□□□□□ -0.54
HMGN5-201ENST00000358130 PLSCR2Q9NRY7 297 aa11.24□□□□□ -0.61
HMGN5-201ENST00000358130 MAPK8IP2Q13387 824 aaPredicted RBP11.23□□□□□ -0.61
HMGN5-201ENST00000358130 DCAF8L1A6NGE4 600 aa11.21□□□□□ -0.61
HMGN5-201ENST00000358130 SP7Q8TDD2 431 aaPredicted RBP11.12□□□□□ -0.63
HMGN5-201ENST00000358130 SCAF1Q9H7N4 1312 aaKnown RBP11.04□□□□□ -0.64
HMGN5-201ENST00000358130 DNAJC5BQ9UF47 199 aa10.81□□□□□ -0.68
HMGN5-201ENST00000358130 HOXD11P31277 338 aaPredicted RBP10.63□□□□□ -0.71
HMGN5-201ENST00000358130 PPP4R3CPQ6ZMV5 832 aa10.6□□□□□ -0.71
HMGN5-201ENST00000358130 CHRDL2Q6WN34 429 aa10.5□□□□□ -0.73
HMGN5-201ENST00000358130 DSG3P32926 999 aa10.43□□□□□ -0.74
HMGN5-201ENST00000358130 KCNA4P22459 653 aa10.42□□□□□ -0.74
HMGN5-201ENST00000358130 LHX8Q68G74 356 aa10.41□□□□□ -0.74
HMGN5-201ENST00000358130 NCBP3Q53F19 620 aaKnown RBP10.3□□□□□ -0.76
HMGN5-201ENST00000358130 CNKSR2Q8WXI2 1034 aa10.27□□□□□ -0.77
HMGN5-201ENST00000358130 RBM42Q9BTD8 480 aaKnown RBP10.21□□□□□ -0.78
HMGN5-201ENST00000358130 NPM3O75607 178 aaKnown RBP10.19□□□□□ -0.78
HMGN5-201ENST00000358130 HAX1O00165 279 aa10.16□□□□□ -0.78
HMGN5-201ENST00000358130 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.1□□□□□ -0.79
HMGN5-201ENST00000358130 CAPN15O75808 1086 aa10.09□□□□□ -0.79
HMGN5-201ENST00000358130 RNF216Q9NWF9 866 aaPredicted RBP10.09□□□□□ -0.79
HMGN5-201ENST00000358130 PCDH10Q9P2E7 1040 aa10.07□□□□□ -0.8
HMGN5-201ENST00000358130 SLC4A1APQ9BWU0 796 aaKnown RBP9.91□□□□□ -0.82
HMGN5-201ENST00000358130 SPINK5Q9NQ38 1064 aaPredicted RBP9.9□□□□□ -0.82
HMGN5-201ENST00000358130 PIP4P2Q8N4L2 257 aa9.85□□□□□ -0.83
HMGN5-201ENST00000358130 POTEMA6NI47 508 aa9.85□□□□□ -0.83
HMGN5-201ENST00000358130 POTEGQ6S5H5 508 aa9.76□□□□□ -0.85
HMGN5-201ENST00000358130 EVX2Q03828 476 aa9.73□□□□□ -0.85
HMGN5-201ENST00000358130 EHMT2Q96KQ7 1210 aa9.73□□□□□ -0.85
HMGN5-201ENST00000358130 SLC4A2P04920 1241 aa9.61□□□□□ -0.87
HMGN5-201ENST00000358130 U3KPZ7 1027 aaPredicted RBP9.6□□□□□ -0.87
HMGN5-201ENST00000358130 ABCB7O75027 752 aa9.59□□□□□ -0.87
HMGN5-201ENST00000358130 GABBR2O75899 941 aa9.59□□□□□ -0.87
HMGN5-201ENST00000358130 ZBTB22O15209 634 aa9.59□□□□□ -0.87
HMGN5-201ENST00000358130 FXR2P51116 673 aaKnown RBP eCLIP9.58□□□□□ -0.88
HMGN5-201ENST00000358130 CSRNP3Q8WYN3 585 aa9.55□□□□□ -0.88
HMGN5-201ENST00000358130 AKT1S1Q96B36 256 aa9.55□□□□□ -0.88
HMGN5-201ENST00000358130 ZNF219Q9P2Y4 722 aaPredicted RBP9.55□□□□□ -0.88
HMGN5-201ENST00000358130 FOXD4L1Q9NU39 408 aa9.53□□□□□ -0.88
HMGN5-201ENST00000358130 APLP2Q06481 763 aa9.52□□□□□ -0.89
HMGN5-201ENST00000358130 TRHP20396 242 aaPredicted RBP9.46□□□□□ -0.9
HMGN5-201ENST00000358130 MYCNP04198 464 aaPredicted RBP9.38□□□□□ -0.91
HMGN5-201ENST00000358130 C19orf67A6NJJ6 358 aa9.35□□□□□ -0.91
HMGN5-201ENST00000358130 REM2Q8IYK8 340 aaPredicted RBP9.34□□□□□ -0.91
HMGN5-201ENST00000358130 OTUD5Q96G74 571 aa9.29□□□□□ -0.92
HMGN5-201ENST00000358130 POTEIP0CG38 1075 aa9.28□□□□□ -0.92
HMGN5-201ENST00000358130 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.27□□□□□ -0.93
HMGN5-201ENST00000358130 HNRNPUL2Q1KMD3 747 aaKnown RBP9.27□□□□□ -0.93
HMGN5-201ENST00000358130 SAMD1Q6SPF0 538 aaPredicted RBP9.25□□□□□ -0.93
HMGN5-201ENST00000358130 PITPNM1O00562 1244 aa9.22□□□□□ -0.93
HMGN5-201ENST00000358130 ATF5Q9Y2D1 282 aaPredicted RBP9.2□□□□□ -0.94
HMGN5-201ENST00000358130 ATXN8OSP0DMR3 200 aa9.15□□□□□ -0.94
HMGN5-201ENST00000358130 CLCN6P51797 869 aa9.15□□□□□ -0.94
HMGN5-201ENST00000358130 DCBLD2Q96PD2 775 aa9.02□□□□□ -0.97
HMGN5-201ENST00000358130 CDAN1Q8IWY9 1227 aa8.99□□□□□ -0.97
HMGN5-201ENST00000358130 PRKAR2AP13861 404 aaKnown RBP8.99□□□□□ -0.97
HMGN5-201ENST00000358130 MMRN1Q13201 1228 aa8.98□□□□□ -0.97
HMGN5-201ENST00000358130 POLA2Q14181 598 aa8.98□□□□□ -0.97
HMGN5-201ENST00000358130 LCE2DQ5TA82 110 aaPredicted RBP8.96□□□□□ -0.98
HMGN5-201ENST00000358130 FAM163AQ96GL9 167 aaPredicted RBP8.93□□□□□ -0.98
HMGN5-201ENST00000358130 POTEB2H3BUK9 544 aa8.87□□□□□ -0.99
HMGN5-201ENST00000358130 MAMSTRQ6ZN01 415 aa8.84□□□□□ -0.99
HMGN5-201ENST00000358130 SPNS2Q8IVW8 549 aa8.81□□□□□ -1
HMGN5-201ENST00000358130 ZBTB12Q9Y330 459 aaPredicted RBP8.77□□□□□ -1.01
HMGN5-201ENST00000358130 MKRN4PQ13434 485 aaPredicted RBP8.77□□□□□ -1.01
HMGN5-201ENST00000358130 FBLN2P98095 1184 aa8.75□□□□□ -1.01
HMGN5-201ENST00000358130 OSCARQ8IYS5 282 aa8.66□□□□□ -1.02
HMGN5-201ENST00000358130 FKBP8Q14318 412 aa8.65□□□□□ -1.03
HMGN5-201ENST00000358130 CD44P16070 742 aaKnown RBP8.61□□□□□ -1.03
HMGN5-201ENST00000358130 SPDYE4A6NLX3 237 aa8.59□□□□□ -1.03
HMGN5-201ENST00000358130 SCUBE2Q9NQ36 999 aa8.58□□□□□ -1.04
HMGN5-201ENST00000358130 ZNF692Q9BU19 519 aaPredicted RBP8.56□□□□□ -1.04
HMGN5-201ENST00000358130 SPDYE1Q8NFV5 336 aaPredicted RBP8.54□□□□□ -1.04
HMGN5-201ENST00000358130 SPDYE2BA6NHP3 402 aa8.53□□□□□ -1.04
HMGN5-201ENST00000358130 SPDYE6P0CI01 402 aa8.53□□□□□ -1.04
HMGN5-201ENST00000358130 SPDYE2Q495Y8 402 aa8.53□□□□□ -1.04
HMGN5-201ENST00000358130 ZNF579Q8NAF0 562 aaKnown RBP8.48□□□□□ -1.05
HMGN5-201ENST00000358130 POTEJP0CG39 1038 aa8.46□□□□□ -1.06
HMGN5-201ENST00000358130 SSUH2Q9Y2M2 353 aa8.45□□□□□ -1.06
HMGN5-201ENST00000358130 CLEC11AQ9Y240 323 aa8.45□□□□□ -1.06
HMGN5-201ENST00000358130 PABPN1Q86U42 306 aaKnown RBP eCLIP8.44□□□□□ -1.06
HMGN5-201ENST00000358130 C7P10643 843 aa8.4□□□□□ -1.06
HMGN5-201ENST00000358130 CHADLQ6NUI6 762 aa8.39□□□□□ -1.07
HMGN5-201ENST00000358130 SLC39A7Q92504 469 aa8.39□□□□□ -1.07
HMGN5-201ENST00000358130 PROM2Q8N271 834 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms