RNA–Protein interactions for RNA: ENST00000358130.6

HMGN5-201, Transcript of high mobility group nucleosome binding domain 5, humanhuman

APPRIS P2 TSL 2 BASIC

Gene HMGN5, Length 2,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN5-201ENST00000358130 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.33□□□□□ -1.882e-15■■■■■ 66.5
HMGN5-201ENST00000358130 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.51□□□□□ -1.531e-11■■■■■ 60.2
HMGN5-201ENST00000358130 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.51□□□□□ -1.691e-10■■■■■ 38.1
HMGN5-201ENST00000358130 TRA2AQ13595 282 aaKnown RBP eCLIP2.66□□□□□ -1.982e-8■■■■■ 32.6
HMGN5-201ENST00000358130 PUM1Q14671 1186 aaKnown RBP eCLIP3.73□□□□□ -1.813e-7■■■■■ 40.6
HMGN5-201ENST00000358130 CPSF6Q16630 551 aaKnown RBP eCLIP4.59□□□□□ -1.677e-7■■■■□ 21
HMGN5-201ENST00000358130 AGGF1Q8N302 714 aaeCLIP4.91□□□□□ -1.622e-6■■■■□ 23.7
HMGN5-201ENST00000358130 ZNF622Q969S3 477 aaKnown RBP eCLIP3.31□□□□□ -1.883e-6■■□□□ 13.5
HMGN5-201ENST00000358130 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.32□□□□□ -1.563e-6■■■■■ 149.1
Retrieved 9 of 9 RNA–protein pairs in 3.2 ms