RNA–Protein interactions for RNA: ENST00000356016.7

LCOR-202, Transcript of ligand dependent nuclear receptor corepressor, humanhuman

APPRIS P3 TSL 2 BASIC

Gene LCOR, Length 4,834 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCOR-202ENST00000356016 DCAF8L2P0C7V8 631 aa27■■□□□ 1.91
LCOR-202ENST00000356016 SUPT5HO00267 1087 aaKnown RBP25.93■■□□□ 1.74
LCOR-202ENST00000356016 NISCHQ9Y2I1 1504 aa25.9■■□□□ 1.74
LCOR-202ENST00000356016 SHROOM4Q9ULL8 1493 aa25.53■■□□□ 1.68
LCOR-202ENST00000356016 EHMT2Q96KQ7 1210 aa25.15■■□□□ 1.62
LCOR-202ENST00000356016 FAM9AQ8IZU1 332 aaPredicted RBP24.47■■□□□ 1.51
LCOR-202ENST00000356016 PCGF6Q9BYE7 350 aa24.33■■□□□ 1.49
LCOR-202ENST00000356016 TTBK1Q5TCY1 1321 aaPredicted RBP24.27■■□□□ 1.48
LCOR-202ENST00000356016 APLP2Q06481 763 aa24.05■■□□□ 1.44
LCOR-202ENST00000356016 RANGAP1P46060 587 aaPredicted RBP23.9■■□□□ 1.42
LCOR-202ENST00000356016 TRIM41Q8WV44 630 aa23.82■■□□□ 1.4
LCOR-202ENST00000356016 PELP1Q8IZL8 1130 aaKnown RBP23.66■■□□□ 1.38
LCOR-202ENST00000356016 CCER1Q8TC90 406 aaPredicted RBP23.61■■□□□ 1.37
LCOR-202ENST00000356016 PPARGC1BQ86YN6 1023 aaKnown RBP23.56■■□□□ 1.36
LCOR-202ENST00000356016 UBTFP17480 764 aaKnown RBP23.48■■□□□ 1.35
LCOR-202ENST00000356016 ATP1B4Q9UN42 357 aaPredicted RBP23.43■■□□□ 1.34
LCOR-202ENST00000356016 ZEB1P37275 1124 aaPredicted RBP23.39■■□□□ 1.33
LCOR-202ENST00000356016 CENPBP07199 599 aaPredicted RBP23.32■■□□□ 1.32
LCOR-202ENST00000356016 LOC105371045A0A1W2PR82 267 aa23.27■■□□□ 1.32
LCOR-202ENST00000356016 YTHDC1Q96MU7 727 aaKnown RBP23.22■■□□□ 1.31
LCOR-202ENST00000356016 CHIC1Q5VXU3 224 aa23.13■■□□□ 1.29
LCOR-202ENST00000356016 TRIM26Q12899 539 aaPredicted RBP23.09■■□□□ 1.29
LCOR-202ENST00000356016 HRCP23327 699 aa23.03■■□□□ 1.28
LCOR-202ENST00000356016 ITGAEP38570 1179 aa22.88■■□□□ 1.25
LCOR-202ENST00000356016 ERICH6Q7L0X2 663 aa22.84■■□□□ 1.25
LCOR-202ENST00000356016 HNRNPUL2Q1KMD3 747 aaKnown RBP22.79■■□□□ 1.24
LCOR-202ENST00000356016 NEFLP07196 543 aa22.72■■□□□ 1.23
LCOR-202ENST00000356016 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.65■■□□□ 1.22
LCOR-202ENST00000356016 CNGB1Q14028 1251 aaPredicted RBP22.51■■□□□ 1.19
LCOR-202ENST00000356016 POLR3GLQ9BT43 218 aa22.5■■□□□ 1.19
LCOR-202ENST00000356016 PABPN1Q86U42 306 aaKnown RBP eCLIP22.37■■□□□ 1.17
LCOR-202ENST00000356016 DIEXFQ68CQ4 756 aaKnown RBP22.33■■□□□ 1.17
LCOR-202ENST00000356016 ABCC9O60706 1549 aa22.27■■□□□ 1.16
LCOR-202ENST00000356016 MYT1LQ9UL68 1186 aa22.26■■□□□ 1.15
LCOR-202ENST00000356016 FAM50AQ14320 339 aaKnown RBP22.16■■□□□ 1.14
LCOR-202ENST00000356016 NEUROD1Q13562 356 aa22.07■■□□□ 1.12
LCOR-202ENST00000356016 MYT1Q01538 1121 aa21.99■■□□□ 1.11
LCOR-202ENST00000356016 GTF3C3Q9Y5Q9 886 aa21.96■■□□□ 1.11
LCOR-202ENST00000356016 TRIM52Q96A61 297 aa21.95■■□□□ 1.1
LCOR-202ENST00000356016 BCANQ96GW7 911 aa21.92■■□□□ 1.1
LCOR-202ENST00000356016 DAXXQ9UER7 740 aaPredicted RBP21.9■■□□□ 1.1
LCOR-202ENST00000356016 SLC4A1APQ9BWU0 796 aaKnown RBP21.87■■□□□ 1.09
LCOR-202ENST00000356016 P3H3Q8IVL6 736 aa21.83■■□□□ 1.08
LCOR-202ENST00000356016 ZNF326Q5BKZ1 582 aaKnown RBP21.8■■□□□ 1.08
LCOR-202ENST00000356016 CSRNP3Q8WYN3 585 aa21.8■■□□□ 1.08
LCOR-202ENST00000356016 ZNF316A6NFI3 1004 aaPredicted RBP21.77■■□□□ 1.08
LCOR-202ENST00000356016 ARID3CA6NKF2 412 aa21.76■■□□□ 1.07
LCOR-202ENST00000356016 FBLN2P98095 1184 aa21.69■■□□□ 1.06
LCOR-202ENST00000356016 ANP32CO43423 234 aa21.65■■□□□ 1.06
LCOR-202ENST00000356016 CLSPNQ9HAW4 1339 aa21.63■■□□□ 1.05
LCOR-202ENST00000356016 ACIN1Q9UKV3 1341 aaKnown RBP21.6■■□□□ 1.05
LCOR-202ENST00000356016 RTL5Q5HYW3 569 aaPredicted RBP21.5■■□□□ 1.03
LCOR-202ENST00000356016 SCRIBQ14160 1630 aa21.44■■□□□ 1.02
LCOR-202ENST00000356016 ZCCHC6Q5VYS8 1495 aaKnown RBP21.43■■□□□ 1.02
LCOR-202ENST00000356016 ZNF777Q9ULD5 760 aaPredicted RBP21.42■■□□□ 1.02
LCOR-202ENST00000356016 CDK11AQ9UQ88 783 aaPredicted RBP21.38■■□□□ 1.01
LCOR-202ENST00000356016 DCAF1Q9Y4B6 1507 aa21.34■■□□□ 1.01
LCOR-202ENST00000356016 DDX10Q13206 875 aaKnown RBP21.32■■□□□ 1
LCOR-202ENST00000356016 BCL11AQ9H165 835 aa21.32■■□□□ 1
LCOR-202ENST00000356016 MYO15BQ96JP2 1530 aa21.29■■□□□ 1
LCOR-202ENST00000356016 FKBP8Q14318 412 aa21.24■□□□□ 0.99
LCOR-202ENST00000356016 CHIC2Q9UKJ5 165 aa21.22■□□□□ 0.99
LCOR-202ENST00000356016 HIRIP3Q9BW71 556 aaPredicted RBP21.19■□□□□ 0.98
LCOR-202ENST00000356016 TONSLQ96HA7 1378 aa21.19■□□□□ 0.98
LCOR-202ENST00000356016 HNRNPUQ00839 825 aaKnown RBP eCLIP21.18■□□□□ 0.98
LCOR-202ENST00000356016 FAM9BQ8IZU0 186 aa21.15■□□□□ 0.98
LCOR-202ENST00000356016 MIER1Q8N108 512 aa21.15■□□□□ 0.98
LCOR-202ENST00000356016 CANXP27824 592 aaKnown RBP21.13■□□□□ 0.97
LCOR-202ENST00000356016 SALL2Q9Y467 1007 aaPredicted RBP21.13■□□□□ 0.97
LCOR-202ENST00000356016 SCAF1Q9H7N4 1312 aaKnown RBP21.11■□□□□ 0.97
LCOR-202ENST00000356016 NPM2Q86SE8 214 aaKnown RBP21.1■□□□□ 0.97
LCOR-202ENST00000356016 SLC24A1O60721 1099 aa21.07■□□□□ 0.96
LCOR-202ENST00000356016 ZBTB47Q9UFB7 747 aaPredicted RBP21■□□□□ 0.95
LCOR-202ENST00000356016 RSF1Q96T23 1441 aaPredicted RBP21■□□□□ 0.95
LCOR-202ENST00000356016 CHGAP10645 457 aaKnown RBP20.99■□□□□ 0.95
LCOR-202ENST00000356016 CLIP1P30622 1438 aa20.99■□□□□ 0.95
LCOR-202ENST00000356016 ANP32AP39687 249 aaKnown RBP20.97■□□□□ 0.95
LCOR-202ENST00000356016 IRX6P78412 446 aaPredicted RBP20.96■□□□□ 0.95
LCOR-202ENST00000356016 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.96■□□□□ 0.959e-7■■■□□ 14.7
LCOR-202ENST00000356016 KDM2AQ9Y2K7 1162 aa20.94■□□□□ 0.94
LCOR-202ENST00000356016 NEFMP07197 916 aa20.9■□□□□ 0.94
LCOR-202ENST00000356016 RRP7BPQ9NSQ0 103 aa20.9■□□□□ 0.94
LCOR-202ENST00000356016 MTUS2Q5JR59 1369 aa20.9■□□□□ 0.94
LCOR-202ENST00000356016 MRS2Q9HD23 443 aa20.89■□□□□ 0.93
LCOR-202ENST00000356016 CEP162Q5TB80 1403 aa20.89■□□□□ 0.93
LCOR-202ENST00000356016 SENP3-EIF4A1A0A087X0R7 540 aa20.89■□□□□ 0.93
LCOR-202ENST00000356016 TMC1Q8TDI8 760 aa20.88■□□□□ 0.93
LCOR-202ENST00000356016 CCDC136Q96JN2 1154 aa20.81■□□□□ 0.92
LCOR-202ENST00000356016 PLPPR3Q6T4P5 718 aa20.8■□□□□ 0.92
LCOR-202ENST00000356016 TSPY4P0CV99 314 aa20.78■□□□□ 0.92
LCOR-202ENST00000356016 TSPY10P0CW01 314 aa20.78■□□□□ 0.92
LCOR-202ENST00000356016 SENP3Q9H4L4 574 aaPredicted RBP20.76■□□□□ 0.91
LCOR-202ENST00000356016 CCDC180Q9P1Z9 1646 aa20.74■□□□□ 0.91
LCOR-202ENST00000356016 STAG3Q9UJ98 1225 aa20.74■□□□□ 0.91
LCOR-202ENST00000356016 NBR1Q14596 966 aa20.72■□□□□ 0.91
LCOR-202ENST00000356016 EIF4G2P78344 907 aaKnown RBP eCLIP20.72■□□□□ 0.91
LCOR-202ENST00000356016 WRNQ14191 1432 aaPredicted RBP eCLIP20.71■□□□□ 0.91
LCOR-202ENST00000356016 GOLGA3Q08378 1498 aa20.71■□□□□ 0.91
LCOR-202ENST00000356016 CHMP7Q8WUX9 453 aaPredicted RBP20.71■□□□□ 0.91
LCOR-202ENST00000356016 SIN3AQ96ST3 1273 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms