RNA–Protein interactions for RNA: ENST00000351488.7

MTMR3-203, Transcript of myotubularin related protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MTMR3, Length 4,464 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTMR3-203ENST00000351488 DCAF8L2P0C7V8 631 aa19.91■□□□□ 0.78
MTMR3-203ENST00000351488 SUPT5HO00267 1087 aaKnown RBP19.07■□□□□ 0.64
MTMR3-203ENST00000351488 NISCHQ9Y2I1 1504 aa18.98■□□□□ 0.63
MTMR3-203ENST00000351488 SHROOM4Q9ULL8 1493 aa18.64■□□□□ 0.57
MTMR3-203ENST00000351488 EHMT2Q96KQ7 1210 aa18.37■□□□□ 0.53
MTMR3-203ENST00000351488 PELP1Q8IZL8 1130 aaKnown RBP18.12■□□□□ 0.49
MTMR3-203ENST00000351488 APLP2Q06481 763 aa18.08■□□□□ 0.49
MTMR3-203ENST00000351488 FAM9AQ8IZU1 332 aaPredicted RBP17.98■□□□□ 0.47
MTMR3-203ENST00000351488 PCGF6Q9BYE7 350 aa17.93■□□□□ 0.46
MTMR3-203ENST00000351488 TTBK1Q5TCY1 1321 aaPredicted RBP17.77■□□□□ 0.44
MTMR3-203ENST00000351488 TRIM41Q8WV44 630 aa17.66■□□□□ 0.42
MTMR3-203ENST00000351488 ZEB1P37275 1124 aaPredicted RBP17.64■□□□□ 0.41
MTMR3-203ENST00000351488 CENPBP07199 599 aaPredicted RBP17.59■□□□□ 0.41
MTMR3-203ENST00000351488 CCER1Q8TC90 406 aaPredicted RBP17.57■□□□□ 0.4
MTMR3-203ENST00000351488 RANGAP1P46060 587 aaPredicted RBP17.55■□□□□ 0.4
MTMR3-203ENST00000351488 UBTFP17480 764 aaKnown RBP17.43■□□□□ 0.38
MTMR3-203ENST00000351488 ATP1B4Q9UN42 357 aaPredicted RBP17.38■□□□□ 0.37
MTMR3-203ENST00000351488 ERICH6Q7L0X2 663 aa17.31■□□□□ 0.36
MTMR3-203ENST00000351488 NEFLP07196 543 aa17.17■□□□□ 0.34
MTMR3-203ENST00000351488 PPARGC1BQ86YN6 1023 aaKnown RBP17.17■□□□□ 0.34
MTMR3-203ENST00000351488 TRIM26Q12899 539 aaPredicted RBP17.16■□□□□ 0.34
MTMR3-203ENST00000351488 YTHDC1Q96MU7 727 aaKnown RBP17.16■□□□□ 0.34
MTMR3-203ENST00000351488 HRCP23327 699 aa17.04■□□□□ 0.32
MTMR3-203ENST00000351488 CHIC1Q5VXU3 224 aa16.98■□□□□ 0.31
MTMR3-203ENST00000351488 LOC105371045A0A1W2PR82 267 aa16.97■□□□□ 0.31
MTMR3-203ENST00000351488 MYT1Q01538 1121 aa16.92■□□□□ 0.3
MTMR3-203ENST00000351488 ITGAEP38570 1179 aa16.88■□□□□ 0.29
MTMR3-203ENST00000351488 HNRNPUL2Q1KMD3 747 aaKnown RBP16.82■□□□□ 0.28
MTMR3-203ENST00000351488 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.75■□□□□ 0.27
MTMR3-203ENST00000351488 POLR3GLQ9BT43 218 aa16.71■□□□□ 0.27
MTMR3-203ENST00000351488 MYT1LQ9UL68 1186 aa16.63■□□□□ 0.25
MTMR3-203ENST00000351488 DAXXQ9UER7 740 aaPredicted RBP16.62■□□□□ 0.25
MTMR3-203ENST00000351488 DIEXFQ68CQ4 756 aaKnown RBP16.58■□□□□ 0.25
MTMR3-203ENST00000351488 CNGB1Q14028 1251 aaPredicted RBP16.57■□□□□ 0.24
MTMR3-203ENST00000351488 MYO15BQ96JP2 1530 aa16.45■□□□□ 0.22
MTMR3-203ENST00000351488 FAM50AQ14320 339 aaKnown RBP16.43■□□□□ 0.22
MTMR3-203ENST00000351488 TRIM52Q96A61 297 aa16.33■□□□□ 0.2
MTMR3-203ENST00000351488 SLC4A1APQ9BWU0 796 aaKnown RBP16.33■□□□□ 0.2
MTMR3-203ENST00000351488 PABPN1Q86U42 306 aaKnown RBP eCLIP16.32■□□□□ 0.2
MTMR3-203ENST00000351488 NEUROD1Q13562 356 aa16.32■□□□□ 0.2
MTMR3-203ENST00000351488 CLSPNQ9HAW4 1339 aa16.29■□□□□ 0.2
MTMR3-203ENST00000351488 RTL5Q5HYW3 569 aaPredicted RBP16.28■□□□□ 0.2
MTMR3-203ENST00000351488 ABCC9O60706 1549 aa16.26■□□□□ 0.19
MTMR3-203ENST00000351488 GTF3C3Q9Y5Q9 886 aa16.25■□□□□ 0.19
MTMR3-203ENST00000351488 ZNF316A6NFI3 1004 aaPredicted RBP16.22■□□□□ 0.19
MTMR3-203ENST00000351488 ANP32CO43423 234 aa16.21■□□□□ 0.19
MTMR3-203ENST00000351488 BCANQ96GW7 911 aa16.18■□□□□ 0.18
MTMR3-203ENST00000351488 ZNF326Q5BKZ1 582 aaKnown RBP16.15■□□□□ 0.18
MTMR3-203ENST00000351488 CSRNP3Q8WYN3 585 aa16.14■□□□□ 0.17
MTMR3-203ENST00000351488 CDK11AQ9UQ88 783 aaPredicted RBP16.08■□□□□ 0.16
MTMR3-203ENST00000351488 ACIN1Q9UKV3 1341 aaKnown RBP16.03■□□□□ 0.16
MTMR3-203ENST00000351488 FBLN2P98095 1184 aa16.02■□□□□ 0.15
MTMR3-203ENST00000351488 P3H3Q8IVL6 736 aa16.01■□□□□ 0.15
MTMR3-203ENST00000351488 ZBTB47Q9UFB7 747 aaPredicted RBP15.94■□□□□ 0.14
MTMR3-203ENST00000351488 ARID3CA6NKF2 412 aa15.92■□□□□ 0.14
MTMR3-203ENST00000351488 CANXP27824 592 aaKnown RBP15.88■□□□□ 0.13
MTMR3-203ENST00000351488 ZNF777Q9ULD5 760 aaPredicted RBP15.85■□□□□ 0.13
MTMR3-203ENST00000351488 SCAF1Q9H7N4 1312 aaKnown RBP15.84■□□□□ 0.13
MTMR3-203ENST00000351488 NEFMP07197 916 aa15.83■□□□□ 0.12
MTMR3-203ENST00000351488 ANP32AP39687 249 aaKnown RBP15.81■□□□□ 0.12
MTMR3-203ENST00000351488 DCAF1Q9Y4B6 1507 aa15.8■□□□□ 0.12
MTMR3-203ENST00000351488 TONSLQ96HA7 1378 aa15.8■□□□□ 0.12
MTMR3-203ENST00000351488 BCL11AQ9H165 835 aa15.78■□□□□ 0.12
MTMR3-203ENST00000351488 FKBP8Q14318 412 aa15.76■□□□□ 0.11
MTMR3-203ENST00000351488 DDX10Q13206 875 aaKnown RBP15.76■□□□□ 0.11
MTMR3-203ENST00000351488 SLC24A1O60721 1099 aa15.74■□□□□ 0.11
MTMR3-203ENST00000351488 HNRNPUQ00839 825 aaKnown RBP eCLIP15.74■□□□□ 0.11
MTMR3-203ENST00000351488 ZCCHC6Q5VYS8 1495 aaKnown RBP15.73■□□□□ 0.11
MTMR3-203ENST00000351488 SCRIBQ14160 1630 aa15.71■□□□□ 0.11
MTMR3-203ENST00000351488 NPM2Q86SE8 214 aaKnown RBP15.7■□□□□ 0.1
MTMR3-203ENST00000351488 FAM9BQ8IZU0 186 aa15.67■□□□□ 0.1
MTMR3-203ENST00000351488 CHIC2Q9UKJ5 165 aa15.62■□□□□ 0.09
MTMR3-203ENST00000351488 CHGAP10645 457 aaKnown RBP15.6■□□□□ 0.09
MTMR3-203ENST00000351488 TMC1Q8TDI8 760 aa15.6■□□□□ 0.09
MTMR3-203ENST00000351488 SALL2Q9Y467 1007 aaPredicted RBP15.58■□□□□ 0.08
MTMR3-203ENST00000351488 CCDC136Q96JN2 1154 aa15.56■□□□□ 0.08
MTMR3-203ENST00000351488 ESF1Q9H501 851 aaKnown RBP15.55■□□□□ 0.08
MTMR3-203ENST00000351488 MIER1Q8N108 512 aa15.55■□□□□ 0.08
MTMR3-203ENST00000351488 UPF2Q9HAU5 1272 aaKnown RBP15.55■□□□□ 0.08
MTMR3-203ENST00000351488 CCDC180Q9P1Z9 1646 aa15.55■□□□□ 0.08
MTMR3-203ENST00000351488 MRS2Q9HD23 443 aa15.54■□□□□ 0.08
MTMR3-203ENST00000351488 TSPY4P0CV99 314 aa15.53■□□□□ 0.08
MTMR3-203ENST00000351488 TSPY10P0CW01 314 aa15.53■□□□□ 0.08
MTMR3-203ENST00000351488 HSP90AA1P07900 732 aaKnown RBP15.53■□□□□ 0.08
MTMR3-203ENST00000351488 MTUS2Q5JR59 1369 aa15.53■□□□□ 0.08
MTMR3-203ENST00000351488 STAG3Q9UJ98 1225 aa15.53■□□□□ 0.08
MTMR3-203ENST00000351488 CLIP1P30622 1438 aa15.52■□□□□ 0.07
MTMR3-203ENST00000351488 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.51■□□□□ 0.074e-6■■□□□ 11.5
MTMR3-203ENST00000351488 ANP32BQ92688 251 aaKnown RBP15.49■□□□□ 0.07
MTMR3-203ENST00000351488 NPM1P06748 294 aaKnown RBP eCLIP15.49■□□□□ 0.07
MTMR3-203ENST00000351488 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.49■□□□□ 0.07
MTMR3-203ENST00000351488 KDM2AQ9Y2K7 1162 aa15.48■□□□□ 0.07
MTMR3-203ENST00000351488 HIRIP3Q9BW71 556 aaPredicted RBP15.47■□□□□ 0.07
MTMR3-203ENST00000351488 WDR43Q15061 677 aaKnown RBP eCLIP15.46■□□□□ 0.06
MTMR3-203ENST00000351488 EIF4G2P78344 907 aaKnown RBP eCLIP15.45■□□□□ 0.06
MTMR3-203ENST00000351488 EIF5BO60841 1220 aaKnown RBP15.42■□□□□ 0.06
MTMR3-203ENST00000351488 EEA1Q15075 1411 aa15.4■□□□□ 0.06
MTMR3-203ENST00000351488 IRX6P78412 446 aaPredicted RBP15.4■□□□□ 0.06
MTMR3-203ENST00000351488 RRP7BPQ9NSQ0 103 aa15.39■□□□□ 0.05
MTMR3-203ENST00000351488 NBR1Q14596 966 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms