RNA–Protein interactions for RNA: ENST00000340892.9

TC2N-201, Transcript of tandem C2 domains, nuclear, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TC2N, Length 4,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TC2N-201ENST00000340892 DCAF8L2P0C7V8 631 aa27.45■■□□□ 1.98
TC2N-201ENST00000340892 SUPT5HO00267 1087 aaKnown RBP26.07■■□□□ 1.76
TC2N-201ENST00000340892 EHMT2Q96KQ7 1210 aa25.6■■□□□ 1.69
TC2N-201ENST00000340892 SHROOM4Q9ULL8 1493 aa25.44■■□□□ 1.66
TC2N-201ENST00000340892 NISCHQ9Y2I1 1504 aa24.83■■□□□ 1.57
TC2N-201ENST00000340892 FAM9AQ8IZU1 332 aaPredicted RBP24.73■■□□□ 1.55
TC2N-201ENST00000340892 TTBK1Q5TCY1 1321 aaPredicted RBP24.69■■□□□ 1.54
TC2N-201ENST00000340892 APLP2Q06481 763 aa24.54■■□□□ 1.52
TC2N-201ENST00000340892 PCGF6Q9BYE7 350 aa24.45■■□□□ 1.5
TC2N-201ENST00000340892 PELP1Q8IZL8 1130 aaKnown RBP24.4■■□□□ 1.5
TC2N-201ENST00000340892 RANGAP1P46060 587 aaPredicted RBP24.32■■□□□ 1.48
TC2N-201ENST00000340892 ATP1B4Q9UN42 357 aaPredicted RBP23.94■■□□□ 1.42
TC2N-201ENST00000340892 CCER1Q8TC90 406 aaPredicted RBP23.89■■□□□ 1.41
TC2N-201ENST00000340892 TRIM41Q8WV44 630 aa23.88■■□□□ 1.41
TC2N-201ENST00000340892 PPARGC1BQ86YN6 1023 aaKnown RBP23.73■■□□□ 1.39
TC2N-201ENST00000340892 CENPBP07199 599 aaPredicted RBP23.72■■□□□ 1.39
TC2N-201ENST00000340892 UBTFP17480 764 aaKnown RBP23.72■■□□□ 1.39
TC2N-201ENST00000340892 YTHDC1Q96MU7 727 aaKnown RBP23.63■■□□□ 1.37
TC2N-201ENST00000340892 ERICH6Q7L0X2 663 aa23.62■■□□□ 1.37
TC2N-201ENST00000340892 ZEB1P37275 1124 aaPredicted RBP23.51■■□□□ 1.35
TC2N-201ENST00000340892 NEFLP07196 543 aa23.28■■□□□ 1.32
TC2N-201ENST00000340892 ITGAEP38570 1179 aa23.22■■□□□ 1.31
TC2N-201ENST00000340892 LOC105371045A0A1W2PR82 267 aa23.14■■□□□ 1.29
TC2N-201ENST00000340892 CNGB1Q14028 1251 aaPredicted RBP23.11■■□□□ 1.29
TC2N-201ENST00000340892 POLR3GLQ9BT43 218 aa23.08■■□□□ 1.29
TC2N-201ENST00000340892 TRIM26Q12899 539 aaPredicted RBP23.01■■□□□ 1.27
TC2N-201ENST00000340892 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.99■■□□□ 1.27
TC2N-201ENST00000340892 HNRNPUL2Q1KMD3 747 aaKnown RBP22.99■■□□□ 1.27
TC2N-201ENST00000340892 HRCP23327 699 aa22.97■■□□□ 1.27
TC2N-201ENST00000340892 MYT1LQ9UL68 1186 aa22.93■■□□□ 1.26
TC2N-201ENST00000340892 CHIC1Q5VXU3 224 aa22.8■■□□□ 1.24
TC2N-201ENST00000340892 MYT1Q01538 1121 aa22.7■■□□□ 1.22
TC2N-201ENST00000340892 DAXXQ9UER7 740 aaPredicted RBP22.63■■□□□ 1.21
TC2N-201ENST00000340892 SLC4A1APQ9BWU0 796 aaKnown RBP22.54■■□□□ 1.2
TC2N-201ENST00000340892 DIEXFQ68CQ4 756 aaKnown RBP22.43■■□□□ 1.18
TC2N-201ENST00000340892 FAM50AQ14320 339 aaKnown RBP22.37■■□□□ 1.17
TC2N-201ENST00000340892 NEUROD1Q13562 356 aa22.32■■□□□ 1.16
TC2N-201ENST00000340892 CLSPNQ9HAW4 1339 aa22.31■■□□□ 1.16
TC2N-201ENST00000340892 BCANQ96GW7 911 aa22.28■■□□□ 1.16
TC2N-201ENST00000340892 TRIM52Q96A61 297 aa22.27■■□□□ 1.16
TC2N-201ENST00000340892 PABPN1Q86U42 306 aaKnown RBP eCLIP22.25■■□□□ 1.15
TC2N-201ENST00000340892 ZNF326Q5BKZ1 582 aaKnown RBP22.19■■□□□ 1.14
TC2N-201ENST00000340892 RTL5Q5HYW3 569 aaPredicted RBP22.1■■□□□ 1.13
TC2N-201ENST00000340892 ZNF316A6NFI3 1004 aaPredicted RBP22.08■■□□□ 1.13
TC2N-201ENST00000340892 GTF3C3Q9Y5Q9 886 aa22.08■■□□□ 1.12
TC2N-201ENST00000340892 BCL11AQ9H165 835 aa22.05■■□□□ 1.12
TC2N-201ENST00000340892 ARID3CA6NKF2 412 aa22.01■■□□□ 1.11
TC2N-201ENST00000340892 FBLN2P98095 1184 aa22.01■■□□□ 1.11
TC2N-201ENST00000340892 P3H3Q8IVL6 736 aa21.94■■□□□ 1.1
TC2N-201ENST00000340892 ANP32CO43423 234 aa21.9■■□□□ 1.1
TC2N-201ENST00000340892 ABCC9O60706 1549 aa21.87■■□□□ 1.09
TC2N-201ENST00000340892 SLC24A1O60721 1099 aa21.81■■□□□ 1.08
TC2N-201ENST00000340892 CDK11AQ9UQ88 783 aaPredicted RBP21.74■■□□□ 1.07
TC2N-201ENST00000340892 ZNF777Q9ULD5 760 aaPredicted RBP21.69■■□□□ 1.06
TC2N-201ENST00000340892 ZBTB47Q9UFB7 747 aaPredicted RBP21.68■■□□□ 1.06
TC2N-201ENST00000340892 CANXP27824 592 aaKnown RBP21.65■■□□□ 1.06
TC2N-201ENST00000340892 CSRNP3Q8WYN3 585 aa21.63■■□□□ 1.05
TC2N-201ENST00000340892 ACIN1Q9UKV3 1341 aaKnown RBP21.57■■□□□ 1.04
TC2N-201ENST00000340892 NPM2Q86SE8 214 aaKnown RBP21.56■■□□□ 1.04
TC2N-201ENST00000340892 SALL2Q9Y467 1007 aaPredicted RBP21.51■■□□□ 1.03
TC2N-201ENST00000340892 NEFMP07197 916 aa21.47■■□□□ 1.03
TC2N-201ENST00000340892 DDX10Q13206 875 aaKnown RBP21.45■■□□□ 1.02
TC2N-201ENST00000340892 FKBP8Q14318 412 aa21.44■■□□□ 1.02
TC2N-201ENST00000340892 CHGAP10645 457 aaKnown RBP21.43■■□□□ 1.02
TC2N-201ENST00000340892 PLPPR3Q6T4P5 718 aa21.43■■□□□ 1.02
TC2N-201ENST00000340892 FAM9BQ8IZU0 186 aa21.4■■□□□ 1.02
TC2N-201ENST00000340892 HNRNPUQ00839 825 aaKnown RBP eCLIP21.4■■□□□ 1.02
TC2N-201ENST00000340892 ANP32AP39687 249 aaKnown RBP21.37■■□□□ 1.01
TC2N-201ENST00000340892 CHIC2Q9UKJ5 165 aa21.34■■□□□ 1.01
TC2N-201ENST00000340892 HIRIP3Q9BW71 556 aaPredicted RBP21.29■■□□□ 1
TC2N-201ENST00000340892 TONSLQ96HA7 1378 aa21.28■■□□□ 1
TC2N-201ENST00000340892 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.24■□□□□ 0.99
TC2N-201ENST00000340892 STAG3Q9UJ98 1225 aa21.23■□□□□ 0.99
TC2N-201ENST00000340892 EIF5BO60841 1220 aaKnown RBP21.21■□□□□ 0.99
TC2N-201ENST00000340892 ESF1Q9H501 851 aaKnown RBP21.21■□□□□ 0.99
TC2N-201ENST00000340892 SENP3Q9H4L4 574 aaPredicted RBP21.2■□□□□ 0.98
TC2N-201ENST00000340892 HSP90AA1P07900 732 aaKnown RBP21.19■□□□□ 0.98
TC2N-201ENST00000340892 KDM2AQ9Y2K7 1162 aa21.18■□□□□ 0.98
TC2N-201ENST00000340892 IRX6P78412 446 aaPredicted RBP21.17■□□□□ 0.98
TC2N-201ENST00000340892 SENP3-EIF4A1A0A087X0R7 540 aa21.15■□□□□ 0.98
TC2N-201ENST00000340892 TMC1Q8TDI8 760 aa21.15■□□□□ 0.98
TC2N-201ENST00000340892 ARXQ96QS3 562 aa21.13■□□□□ 0.97
TC2N-201ENST00000340892 CCDC136Q96JN2 1154 aa21.1■□□□□ 0.97
TC2N-201ENST00000340892 NBR1Q14596 966 aa21.09■□□□□ 0.97
TC2N-201ENST00000340892 MRS2Q9HD23 443 aa21.08■□□□□ 0.97
TC2N-201ENST00000340892 MIER1Q8N108 512 aa21.07■□□□□ 0.96
TC2N-201ENST00000340892 PLEKHG5O94827 1062 aa21.05■□□□□ 0.96
TC2N-201ENST00000340892 UPF2Q9HAU5 1272 aaKnown RBP21.01■□□□□ 0.95
TC2N-201ENST00000340892 NPM1P06748 294 aaKnown RBP eCLIP21.01■□□□□ 0.95
TC2N-201ENST00000340892 TSPY4P0CV99 314 aa20.97■□□□□ 0.95
TC2N-201ENST00000340892 TSPY10P0CW01 314 aa20.97■□□□□ 0.95
TC2N-201ENST00000340892 ANP32BQ92688 251 aaKnown RBP20.96■□□□□ 0.95
TC2N-201ENST00000340892 RRP7BPQ9NSQ0 103 aa20.95■□□□□ 0.94
TC2N-201ENST00000340892 WDR43Q15061 677 aaKnown RBP eCLIP20.93■□□□□ 0.94
TC2N-201ENST00000340892 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.92■□□□□ 0.94
TC2N-201ENST00000340892 SCAF1Q9H7N4 1312 aaKnown RBP20.91■□□□□ 0.94
TC2N-201ENST00000340892 SCRIBQ14160 1630 aa20.9■□□□□ 0.94
TC2N-201ENST00000340892 A0A0G2JS52 829 aa20.88■□□□□ 0.93
TC2N-201ENST00000340892 RGL3Q3MIN7 710 aa20.87■□□□□ 0.93
TC2N-201ENST00000340892 MTUS2Q5JR59 1369 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms