RNA–Protein interactions for RNA: ENST00000340848.11

TBC1D16-202, Transcript of TBC1 domain family member 16, humanhuman

TSL 1 (best) BASIC

Gene TBC1D16, Length 4,244 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D16-202ENST00000340848 DCAF8L2P0C7V8 631 aa21.64■■□□□ 1.06
TBC1D16-202ENST00000340848 SUPT5HO00267 1087 aaKnown RBP20.6■□□□□ 0.89
TBC1D16-202ENST00000340848 SHROOM4Q9ULL8 1493 aa20.28■□□□□ 0.84
TBC1D16-202ENST00000340848 EHMT2Q96KQ7 1210 aa20.19■□□□□ 0.82
TBC1D16-202ENST00000340848 NISCHQ9Y2I1 1504 aa20.13■□□□□ 0.81
TBC1D16-202ENST00000340848 FAM9AQ8IZU1 332 aaPredicted RBP19.52■□□□□ 0.72
TBC1D16-202ENST00000340848 TTBK1Q5TCY1 1321 aaPredicted RBP19.42■□□□□ 0.7
TBC1D16-202ENST00000340848 PCGF6Q9BYE7 350 aa19.2■□□□□ 0.66
TBC1D16-202ENST00000340848 RANGAP1P46060 587 aaPredicted RBP19.14■□□□□ 0.65
TBC1D16-202ENST00000340848 APLP2Q06481 763 aa18.95■□□□□ 0.62
TBC1D16-202ENST00000340848 PPARGC1BQ86YN6 1023 aaKnown RBP18.82■□□□□ 0.6
TBC1D16-202ENST00000340848 TRIM41Q8WV44 630 aa18.79■□□□□ 0.6
TBC1D16-202ENST00000340848 ATP1B4Q9UN42 357 aaPredicted RBP18.7■□□□□ 0.58
TBC1D16-202ENST00000340848 UBTFP17480 764 aaKnown RBP18.6■□□□□ 0.57
TBC1D16-202ENST00000340848 CCER1Q8TC90 406 aaPredicted RBP18.59■□□□□ 0.57
TBC1D16-202ENST00000340848 LOC105371045A0A1W2PR82 267 aa18.47■□□□□ 0.55
TBC1D16-202ENST00000340848 YTHDC1Q96MU7 727 aaKnown RBP18.36■□□□□ 0.53
TBC1D16-202ENST00000340848 PELP1Q8IZL8 1130 aaKnown RBP18.34■□□□□ 0.53
TBC1D16-202ENST00000340848 ITGAEP38570 1179 aa18.23■□□□□ 0.51
TBC1D16-202ENST00000340848 CHIC1Q5VXU3 224 aa18.2■□□□□ 0.5
TBC1D16-202ENST00000340848 CENPBP07199 599 aaPredicted RBP18.16■□□□□ 0.5
TBC1D16-202ENST00000340848 ZEB1P37275 1124 aaPredicted RBP18.13■□□□□ 0.49
TBC1D16-202ENST00000340848 HNRNPUL2Q1KMD3 747 aaKnown RBP18.07■□□□□ 0.48
TBC1D16-202ENST00000340848 CNGB1Q14028 1251 aaPredicted RBP18.05■□□□□ 0.48
TBC1D16-202ENST00000340848 TRIM26Q12899 539 aaPredicted RBP18.03■□□□□ 0.48
TBC1D16-202ENST00000340848 HRCP23327 699 aa17.98■□□□□ 0.47
TBC1D16-202ENST00000340848 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.94■□□□□ 0.46
TBC1D16-202ENST00000340848 POLR3GLQ9BT43 218 aa17.92■□□□□ 0.46
TBC1D16-202ENST00000340848 PABPN1Q86U42 306 aaKnown RBP eCLIP17.89■□□□□ 0.45
TBC1D16-202ENST00000340848 ERICH6Q7L0X2 663 aa17.85■□□□□ 0.45
TBC1D16-202ENST00000340848 NEFLP07196 543 aa17.78■□□□□ 0.44
TBC1D16-202ENST00000340848 MYT1LQ9UL68 1186 aa17.77■□□□□ 0.44
TBC1D16-202ENST00000340848 ABCC9O60706 1549 aa17.66■□□□□ 0.42
TBC1D16-202ENST00000340848 FAM50AQ14320 339 aaKnown RBP17.54■□□□□ 0.4
TBC1D16-202ENST00000340848 DIEXFQ68CQ4 756 aaKnown RBP17.5■□□□□ 0.39
TBC1D16-202ENST00000340848 NEUROD1Q13562 356 aa17.5■□□□□ 0.39
TBC1D16-202ENST00000340848 CCDC180Q9P1Z9 1646 aa17.48■□□□□ 0.39
TBC1D16-202ENST00000340848 ARID3CA6NKF2 412 aa17.45■□□□□ 0.38
TBC1D16-202ENST00000340848 SLC4A1APQ9BWU0 796 aaKnown RBP17.42■□□□□ 0.38
TBC1D16-202ENST00000340848 P3H3Q8IVL6 736 aa17.42■□□□□ 0.38
TBC1D16-202ENST00000340848 TRIM52Q96A61 297 aa17.38■□□□□ 0.37
TBC1D16-202ENST00000340848 FBLN2P98095 1184 aa17.36■□□□□ 0.37
TBC1D16-202ENST00000340848 BCANQ96GW7 911 aa17.35■□□□□ 0.37
TBC1D16-202ENST00000340848 ZNF326Q5BKZ1 582 aaKnown RBP17.34■□□□□ 0.37
TBC1D16-202ENST00000340848 MYT1Q01538 1121 aa17.22■□□□□ 0.35
TBC1D16-202ENST00000340848 GTF3C3Q9Y5Q9 886 aa17.22■□□□□ 0.35
TBC1D16-202ENST00000340848 CSRNP3Q8WYN3 585 aa17.17■□□□□ 0.34
TBC1D16-202ENST00000340848 DAXXQ9UER7 740 aaPredicted RBP17.15■□□□□ 0.34
TBC1D16-202ENST00000340848 BCL11AQ9H165 835 aa17.08■□□□□ 0.33
TBC1D16-202ENST00000340848 CLSPNQ9HAW4 1339 aa17.07■□□□□ 0.32
TBC1D16-202ENST00000340848 ZNF777Q9ULD5 760 aaPredicted RBP17.05■□□□□ 0.32
TBC1D16-202ENST00000340848 ZNF316A6NFI3 1004 aaPredicted RBP17.03■□□□□ 0.32
TBC1D16-202ENST00000340848 ZCCHC6Q5VYS8 1495 aaKnown RBP16.99■□□□□ 0.31
TBC1D16-202ENST00000340848 ANP32CO43423 234 aa16.97■□□□□ 0.31
TBC1D16-202ENST00000340848 HIRIP3Q9BW71 556 aaPredicted RBP16.88■□□□□ 0.29
TBC1D16-202ENST00000340848 CHIC2Q9UKJ5 165 aa16.87■□□□□ 0.29
TBC1D16-202ENST00000340848 DDX10Q13206 875 aaKnown RBP16.85■□□□□ 0.29
TBC1D16-202ENST00000340848 SALL2Q9Y467 1007 aaPredicted RBP16.84■□□□□ 0.29
TBC1D16-202ENST00000340848 ACIN1Q9UKV3 1341 aaKnown RBP16.83■□□□□ 0.29
TBC1D16-202ENST00000340848 SLC24A1O60721 1099 aa16.82■□□□□ 0.28
TBC1D16-202ENST00000340848 SCRIBQ14160 1630 aa16.81■□□□□ 0.28
TBC1D16-202ENST00000340848 PLPPR3Q6T4P5 718 aa16.81■□□□□ 0.28
TBC1D16-202ENST00000340848 DCAF1Q9Y4B6 1507 aa16.81■□□□□ 0.28
TBC1D16-202ENST00000340848 SENP3Q9H4L4 574 aaPredicted RBP16.78■□□□□ 0.28
TBC1D16-202ENST00000340848 RTL5Q5HYW3 569 aaPredicted RBP16.78■□□□□ 0.28
TBC1D16-202ENST00000340848 SENP3-EIF4A1A0A087X0R7 540 aa16.77■□□□□ 0.27
TBC1D16-202ENST00000340848 CHGAP10645 457 aaKnown RBP16.75■□□□□ 0.27
TBC1D16-202ENST00000340848 FAM9BQ8IZU0 186 aa16.71■□□□□ 0.27
TBC1D16-202ENST00000340848 CDK11AQ9UQ88 783 aaPredicted RBP16.7■□□□□ 0.26
TBC1D16-202ENST00000340848 FKBP8Q14318 412 aa16.69■□□□□ 0.26
TBC1D16-202ENST00000340848 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.69■□□□□ 0.26
TBC1D16-202ENST00000340848 HNRNPUQ00839 825 aaKnown RBP eCLIP16.68■□□□□ 0.26
TBC1D16-202ENST00000340848 NPM2Q86SE8 214 aaKnown RBP16.66■□□□□ 0.26
TBC1D16-202ENST00000340848 KDM2AQ9Y2K7 1162 aa16.65■□□□□ 0.26
TBC1D16-202ENST00000340848 CANXP27824 592 aaKnown RBP16.64■□□□□ 0.25
TBC1D16-202ENST00000340848 MIER1Q8N108 512 aa16.63■□□□□ 0.25
TBC1D16-202ENST00000340848 MYO15BQ96JP2 1530 aa16.63■□□□□ 0.25
TBC1D16-202ENST00000340848 IRX6P78412 446 aaPredicted RBP16.62■□□□□ 0.25
TBC1D16-202ENST00000340848 TONSLQ96HA7 1378 aa16.61■□□□□ 0.25
TBC1D16-202ENST00000340848 RRP7BPQ9NSQ0 103 aa16.57■□□□□ 0.24
TBC1D16-202ENST00000340848 ZBTB47Q9UFB7 747 aaPredicted RBP16.51■□□□□ 0.23
TBC1D16-202ENST00000340848 PLEKHG5O94827 1062 aa16.5■□□□□ 0.23
TBC1D16-202ENST00000340848 SCAF1Q9H7N4 1312 aaKnown RBP16.49■□□□□ 0.23
TBC1D16-202ENST00000340848 STAG3Q9UJ98 1225 aa16.48■□□□□ 0.23
TBC1D16-202ENST00000340848 KCNH8Q96L42 1107 aa16.47■□□□□ 0.23
TBC1D16-202ENST00000340848 TMC1Q8TDI8 760 aa16.45■□□□□ 0.22
TBC1D16-202ENST00000340848 RGL3Q3MIN7 710 aa16.45■□□□□ 0.22
TBC1D16-202ENST00000340848 MRS2Q9HD23 443 aa16.45■□□□□ 0.22
TBC1D16-202ENST00000340848 NEFMP07197 916 aa16.44■□□□□ 0.22
TBC1D16-202ENST00000340848 MTUS2Q5JR59 1369 aa16.44■□□□□ 0.22
TBC1D16-202ENST00000340848 CHMP7Q8WUX9 453 aaPredicted RBP16.43■□□□□ 0.22
TBC1D16-202ENST00000340848 CLIP1P30622 1438 aa16.42■□□□□ 0.22
TBC1D16-202ENST00000340848 TSPY4P0CV99 314 aa16.42■□□□□ 0.22
TBC1D16-202ENST00000340848 TSPY10P0CW01 314 aa16.42■□□□□ 0.22
TBC1D16-202ENST00000340848 ESF1Q9H501 851 aaKnown RBP16.42■□□□□ 0.22
TBC1D16-202ENST00000340848 RSF1Q96T23 1441 aaPredicted RBP16.41■□□□□ 0.22
TBC1D16-202ENST00000340848 NPM1P06748 294 aaKnown RBP eCLIP16.39■□□□□ 0.21
TBC1D16-202ENST00000340848 SIN3AQ96ST3 1273 aa16.38■□□□□ 0.21
TBC1D16-202ENST00000340848 ANP32AP39687 249 aaKnown RBP16.36■□□□□ 0.21
TBC1D16-202ENST00000340848 CCDC136Q96JN2 1154 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms