RNA–Protein interactions for RNA: ENST00000338797.10

CRTC1-202, Transcript of CREB regulated transcription coactivator 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CRTC1, Length 6,929 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC1-202ENST00000338797 DCAF8L2P0C7V8 631 aa24.86■■□□□ 1.57
CRTC1-202ENST00000338797 EHMT2Q96KQ7 1210 aa23.17■■□□□ 1.3
CRTC1-202ENST00000338797 SUPT5HO00267 1087 aaKnown RBP22.99■■□□□ 1.27
CRTC1-202ENST00000338797 SHROOM4Q9ULL8 1493 aa22.64■■□□□ 1.21
CRTC1-202ENST00000338797 TTBK1Q5TCY1 1321 aaPredicted RBP22.26■■□□□ 1.15
CRTC1-202ENST00000338797 RANGAP1P46060 587 aaPredicted RBP22.07■■□□□ 1.12
CRTC1-202ENST00000338797 APLP2Q06481 763 aa22.04■■□□□ 1.12
CRTC1-202ENST00000338797 FAM9AQ8IZU1 332 aaPredicted RBP21.97■■□□□ 1.11
CRTC1-202ENST00000338797 ATP1B4Q9UN42 357 aaPredicted RBP21.85■■□□□ 1.09
CRTC1-202ENST00000338797 PELP1Q8IZL8 1130 aaKnown RBP21.76■■□□□ 1.07
CRTC1-202ENST00000338797 NISCHQ9Y2I1 1504 aa21.52■■□□□ 1.04
CRTC1-202ENST00000338797 PCGF6Q9BYE7 350 aa21.47■■□□□ 1.03
CRTC1-202ENST00000338797 ERICH6Q7L0X2 663 aa21.31■■□□□ 1
CRTC1-202ENST00000338797 MYT1LQ9UL68 1186 aa21.24■□□□□ 0.99
CRTC1-202ENST00000338797 CHIC1Q5VXU3 224 aa21.19■□□□□ 0.98
CRTC1-202ENST00000338797 UBTFP17480 764 aaKnown RBP21.12■□□□□ 0.97
CRTC1-202ENST00000338797 CCER1Q8TC90 406 aaPredicted RBP21.08■□□□□ 0.97
CRTC1-202ENST00000338797 PPARGC1BQ86YN6 1023 aaKnown RBP21.06■□□□□ 0.96
CRTC1-202ENST00000338797 TRIM41Q8WV44 630 aa21.03■□□□□ 0.96
CRTC1-202ENST00000338797 YTHDC1Q96MU7 727 aaKnown RBP21■□□□□ 0.95
CRTC1-202ENST00000338797 POLR3GLQ9BT43 218 aa20.97■□□□□ 0.95
CRTC1-202ENST00000338797 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.95■□□□□ 0.94
CRTC1-202ENST00000338797 HNRNPUL2Q1KMD3 747 aaKnown RBP20.95■□□□□ 0.94
CRTC1-202ENST00000338797 CNGB1Q14028 1251 aaPredicted RBP20.94■□□□□ 0.94
CRTC1-202ENST00000338797 ITGAEP38570 1179 aa20.82■□□□□ 0.92
CRTC1-202ENST00000338797 SLC4A1APQ9BWU0 796 aaKnown RBP20.76■□□□□ 0.91
CRTC1-202ENST00000338797 CENPBP07199 599 aaPredicted RBP20.75■□□□□ 0.91
CRTC1-202ENST00000338797 MYT1Q01538 1121 aa20.75■□□□□ 0.91
CRTC1-202ENST00000338797 NEFLP07196 543 aa20.71■□□□□ 0.91
CRTC1-202ENST00000338797 ZEB1P37275 1124 aaPredicted RBP20.41■□□□□ 0.86
CRTC1-202ENST00000338797 DAXXQ9UER7 740 aaPredicted RBP20.41■□□□□ 0.86
CRTC1-202ENST00000338797 SLC24A1O60721 1099 aa20.2■□□□□ 0.82
CRTC1-202ENST00000338797 BCL11AQ9H165 835 aa20.2■□□□□ 0.82
CRTC1-202ENST00000338797 CLSPNQ9HAW4 1339 aa20.11■□□□□ 0.81
CRTC1-202ENST00000338797 FBLN2P98095 1184 aa20.1■□□□□ 0.81
CRTC1-202ENST00000338797 PLPPR3Q6T4P5 718 aa20.09■□□□□ 0.81
CRTC1-202ENST00000338797 BCANQ96GW7 911 aa20.07■□□□□ 0.8
CRTC1-202ENST00000338797 FAM50AQ14320 339 aaKnown RBP20.06■□□□□ 0.8
CRTC1-202ENST00000338797 LOC105371045A0A1W2PR82 267 aa20.05■□□□□ 0.8
CRTC1-202ENST00000338797 TRIM52Q96A61 297 aa20.03■□□□□ 0.8
CRTC1-202ENST00000338797 PABPN1Q86U42 306 aaKnown RBP eCLIP20■□□□□ 0.79
CRTC1-202ENST00000338797 ZNF326Q5BKZ1 582 aaKnown RBP19.97■□□□□ 0.79
CRTC1-202ENST00000338797 ZNF316A6NFI3 1004 aaPredicted RBP19.93■□□□□ 0.78
CRTC1-202ENST00000338797 NEUROD1Q13562 356 aa19.93■□□□□ 0.78
CRTC1-202ENST00000338797 ARID3CA6NKF2 412 aa19.92■□□□□ 0.78
CRTC1-202ENST00000338797 TRIM26Q12899 539 aaPredicted RBP19.9■□□□□ 0.78
CRTC1-202ENST00000338797 HRCP23327 699 aa19.73■□□□□ 0.75
CRTC1-202ENST00000338797 ZBTB47Q9UFB7 747 aaPredicted RBP19.7■□□□□ 0.74
CRTC1-202ENST00000338797 ABCC9O60706 1549 aa19.68■□□□□ 0.74
CRTC1-202ENST00000338797 P3H3Q8IVL6 736 aa19.65■□□□□ 0.74
CRTC1-202ENST00000338797 CANXP27824 592 aaKnown RBP19.6■□□□□ 0.73
CRTC1-202ENST00000338797 RTL5Q5HYW3 569 aaPredicted RBP19.6■□□□□ 0.73
CRTC1-202ENST00000338797 ZNF777Q9ULD5 760 aaPredicted RBP19.58■□□□□ 0.72
CRTC1-202ENST00000338797 ESF1Q9H501 851 aaKnown RBP19.52■□□□□ 0.72
CRTC1-202ENST00000338797 PLEKHG5O94827 1062 aa19.51■□□□□ 0.71
CRTC1-202ENST00000338797 CHGAP10645 457 aaKnown RBP19.5■□□□□ 0.71
CRTC1-202ENST00000338797 SENP3Q9H4L4 574 aaPredicted RBP19.49■□□□□ 0.71
CRTC1-202ENST00000338797 SCAF1Q9H7N4 1312 aaKnown RBP19.48■□□□□ 0.71
CRTC1-202ENST00000338797 A0A0G2JS52 829 aa19.47■□□□□ 0.71
CRTC1-202ENST00000338797 STAG3Q9UJ98 1225 aa19.46■□□□□ 0.71
CRTC1-202ENST00000338797 DIEXFQ68CQ4 756 aaKnown RBP19.46■□□□□ 0.71
CRTC1-202ENST00000338797 NEFMP07197 916 aa19.46■□□□□ 0.71
CRTC1-202ENST00000338797 ANP32CO43423 234 aa19.36■□□□□ 0.69
CRTC1-202ENST00000338797 ZBTB7CA1YPR0 619 aa19.29■□□□□ 0.68
CRTC1-202ENST00000338797 NPM2Q86SE8 214 aaKnown RBP19.25■□□□□ 0.67
CRTC1-202ENST00000338797 SALL2Q9Y467 1007 aaPredicted RBP19.21■□□□□ 0.67
CRTC1-202ENST00000338797 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.2■□□□□ 0.667e-7■■□□□ 12.1
CRTC1-202ENST00000338797 CDK11AQ9UQ88 783 aaPredicted RBP19.18■□□□□ 0.66
CRTC1-202ENST00000338797 NPM1P06748 294 aaKnown RBP eCLIP19.17■□□□□ 0.66
CRTC1-202ENST00000338797 C14orf37Q86TY3 774 aa19.09■□□□□ 0.65
CRTC1-202ENST00000338797 GTF3C3Q9Y5Q9 886 aa19.03■□□□□ 0.64
CRTC1-202ENST00000338797 HSP90AA1P07900 732 aaKnown RBP19.03■□□□□ 0.64
CRTC1-202ENST00000338797 CHIC2Q9UKJ5 165 aa19■□□□□ 0.63
CRTC1-202ENST00000338797 KDM2AQ9Y2K7 1162 aa18.97■□□□□ 0.63
CRTC1-202ENST00000338797 ARXQ96QS3 562 aa18.95■□□□□ 0.62
CRTC1-202ENST00000338797 TULP1O00294 542 aaPredicted RBP18.94■□□□□ 0.62
CRTC1-202ENST00000338797 FAM9BQ8IZU0 186 aa18.94■□□□□ 0.62
CRTC1-202ENST00000338797 HAP1P54257 671 aaPredicted RBP18.91■□□□□ 0.62
CRTC1-202ENST00000338797 ANP32AP39687 249 aaKnown RBP18.88■□□□□ 0.61
CRTC1-202ENST00000338797 ARID4BQ4LE39 1312 aaPredicted RBP18.88■□□□□ 0.61
CRTC1-202ENST00000338797 KCNH8Q96L42 1107 aa18.85■□□□□ 0.61
CRTC1-202ENST00000338797 PPP1R15AO75807 674 aaPredicted RBP18.8■□□□□ 0.6
CRTC1-202ENST00000338797 SENP3-EIF4A1A0A087X0R7 540 aa18.8■□□□□ 0.6
CRTC1-202ENST00000338797 ANP32BQ92688 251 aaKnown RBP18.77■□□□□ 0.6
CRTC1-202ENST00000338797 TONSLQ96HA7 1378 aa18.77■□□□□ 0.59
CRTC1-202ENST00000338797 TAOK2Q9UL54 1235 aa18.76■□□□□ 0.59
CRTC1-202ENST00000338797 HNRNPUQ00839 825 aaKnown RBP eCLIP18.75■□□□□ 0.59
CRTC1-202ENST00000338797 FKBP8Q14318 412 aa18.75■□□□□ 0.59
CRTC1-202ENST00000338797 DDX10Q13206 875 aaKnown RBP18.74■□□□□ 0.59
CRTC1-202ENST00000338797 TPRNQ4KMQ1 711 aa18.74■□□□□ 0.59
CRTC1-202ENST00000338797 CHMP7Q8WUX9 453 aaPredicted RBP18.74■□□□□ 0.59
CRTC1-202ENST00000338797 HIRIP3Q9BW71 556 aaPredicted RBP18.74■□□□□ 0.59
CRTC1-202ENST00000338797 LMOD2Q6P5Q4 547 aa18.73■□□□□ 0.59
CRTC1-202ENST00000338797 WDR43Q15061 677 aaKnown RBP eCLIP18.73■□□□□ 0.59
CRTC1-202ENST00000338797 CSRNP3Q8WYN3 585 aa18.72■□□□□ 0.59
CRTC1-202ENST00000338797 UPF2Q9HAU5 1272 aaKnown RBP18.72■□□□□ 0.59
CRTC1-202ENST00000338797 EIF5BO60841 1220 aaKnown RBP18.71■□□□□ 0.59
CRTC1-202ENST00000338797 SCRIBQ14160 1630 aa18.7■□□□□ 0.58
CRTC1-202ENST00000338797 TMC1Q8TDI8 760 aa18.69■□□□□ 0.58
CRTC1-202ENST00000338797 PPM1GO15355 546 aaPredicted RBP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms