RNA–Protein interactions for RNA: ENST00000335509.10

TPCN1-201, Transcript of two pore segment channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPCN1, Length 5,274 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPCN1-201ENST00000335509 DCAF8L2P0C7V8 631 aa27.78■■■□□ 2.04
TPCN1-201ENST00000335509 SUPT5HO00267 1087 aaKnown RBP26.65■■□□□ 1.86
TPCN1-201ENST00000335509 NISCHQ9Y2I1 1504 aa26.29■■□□□ 1.8
TPCN1-201ENST00000335509 SHROOM4Q9ULL8 1493 aa26.09■■□□□ 1.77
TPCN1-201ENST00000335509 EHMT2Q96KQ7 1210 aa25.82■■□□□ 1.72
TPCN1-201ENST00000335509 FAM9AQ8IZU1 332 aaPredicted RBP25.16■■□□□ 1.62
TPCN1-201ENST00000335509 PCGF6Q9BYE7 350 aa25.09■■□□□ 1.61
TPCN1-201ENST00000335509 APLP2Q06481 763 aa25■■□□□ 1.59
TPCN1-201ENST00000335509 TTBK1Q5TCY1 1321 aaPredicted RBP24.95■■□□□ 1.59
TPCN1-201ENST00000335509 PELP1Q8IZL8 1130 aaKnown RBP24.91■■□□□ 1.58
TPCN1-201ENST00000335509 RANGAP1P46060 587 aaPredicted RBP24.56■■□□□ 1.52
TPCN1-201ENST00000335509 TRIM41Q8WV44 630 aa24.54■■□□□ 1.52
TPCN1-201ENST00000335509 CCER1Q8TC90 406 aaPredicted RBP24.45■■□□□ 1.5
TPCN1-201ENST00000335509 CENPBP07199 599 aaPredicted RBP24.35■■□□□ 1.49
TPCN1-201ENST00000335509 ZEB1P37275 1124 aaPredicted RBP24.35■■□□□ 1.49
TPCN1-201ENST00000335509 UBTFP17480 764 aaKnown RBP24.24■■□□□ 1.47
TPCN1-201ENST00000335509 ATP1B4Q9UN42 357 aaPredicted RBP24.2■■□□□ 1.46
TPCN1-201ENST00000335509 PPARGC1BQ86YN6 1023 aaKnown RBP24.14■■□□□ 1.46
TPCN1-201ENST00000335509 YTHDC1Q96MU7 727 aaKnown RBP24.02■■□□□ 1.44
TPCN1-201ENST00000335509 ERICH6Q7L0X2 663 aa23.96■■□□□ 1.43
TPCN1-201ENST00000335509 TRIM26Q12899 539 aaPredicted RBP23.84■■□□□ 1.41
TPCN1-201ENST00000335509 LOC105371045A0A1W2PR82 267 aa23.81■■□□□ 1.4
TPCN1-201ENST00000335509 HRCP23327 699 aa23.77■■□□□ 1.4
TPCN1-201ENST00000335509 NEFLP07196 543 aa23.75■■□□□ 1.39
TPCN1-201ENST00000335509 CHIC1Q5VXU3 224 aa23.71■■□□□ 1.39
TPCN1-201ENST00000335509 ITGAEP38570 1179 aa23.58■■□□□ 1.37
TPCN1-201ENST00000335509 HNRNPUL2Q1KMD3 747 aaKnown RBP23.48■■□□□ 1.35
TPCN1-201ENST00000335509 POLR3GLQ9BT43 218 aa23.3■■□□□ 1.32
TPCN1-201ENST00000335509 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.29■■□□□ 1.32
TPCN1-201ENST00000335509 MYT1Q01538 1121 aa23.25■■□□□ 1.31
TPCN1-201ENST00000335509 CNGB1Q14028 1251 aaPredicted RBP23.24■■□□□ 1.31
TPCN1-201ENST00000335509 DIEXFQ68CQ4 756 aaKnown RBP23.1■■□□□ 1.29
TPCN1-201ENST00000335509 MYT1LQ9UL68 1186 aa23.07■■□□□ 1.28
TPCN1-201ENST00000335509 DAXXQ9UER7 740 aaPredicted RBP22.95■■□□□ 1.26
TPCN1-201ENST00000335509 FAM50AQ14320 339 aaKnown RBP22.85■■□□□ 1.25
TPCN1-201ENST00000335509 PABPN1Q86U42 306 aaKnown RBP eCLIP22.78■■□□□ 1.246e-6■■■■□ 21.1
TPCN1-201ENST00000335509 NEUROD1Q13562 356 aa22.76■■□□□ 1.23
TPCN1-201ENST00000335509 GTF3C3Q9Y5Q9 886 aa22.72■■□□□ 1.23
TPCN1-201ENST00000335509 SLC4A1APQ9BWU0 796 aaKnown RBP22.69■■□□□ 1.22
TPCN1-201ENST00000335509 TRIM52Q96A61 297 aa22.68■■□□□ 1.22
TPCN1-201ENST00000335509 BCANQ96GW7 911 aa22.67■■□□□ 1.22
TPCN1-201ENST00000335509 ABCC9O60706 1549 aa22.62■■□□□ 1.21
TPCN1-201ENST00000335509 CLSPNQ9HAW4 1339 aa22.58■■□□□ 1.21
TPCN1-201ENST00000335509 RTL5Q5HYW3 569 aaPredicted RBP22.53■■□□□ 1.2
TPCN1-201ENST00000335509 ZNF316A6NFI3 1004 aaPredicted RBP22.51■■□□□ 1.19
TPCN1-201ENST00000335509 ZNF326Q5BKZ1 582 aaKnown RBP22.51■■□□□ 1.19
TPCN1-201ENST00000335509 ANP32CO43423 234 aa22.47■■□□□ 1.19
TPCN1-201ENST00000335509 CSRNP3Q8WYN3 585 aa22.41■■□□□ 1.18
TPCN1-201ENST00000335509 P3H3Q8IVL6 736 aa22.37■■□□□ 1.17
TPCN1-201ENST00000335509 ACIN1Q9UKV3 1341 aaKnown RBP22.35■■□□□ 1.17
TPCN1-201ENST00000335509 ARID3CA6NKF2 412 aa22.29■■□□□ 1.16
TPCN1-201ENST00000335509 FBLN2P98095 1184 aa22.29■■□□□ 1.16
TPCN1-201ENST00000335509 CDK11AQ9UQ88 783 aaPredicted RBP22.28■■□□□ 1.16
TPCN1-201ENST00000335509 BCL11AQ9H165 835 aa22.08■■□□□ 1.13
TPCN1-201ENST00000335509 ZNF777Q9ULD5 760 aaPredicted RBP22.06■■□□□ 1.12
TPCN1-201ENST00000335509 DDX10Q13206 875 aaKnown RBP22■■□□□ 1.11
TPCN1-201ENST00000335509 CANXP27824 592 aaKnown RBP21.99■■□□□ 1.11
TPCN1-201ENST00000335509 FKBP8Q14318 412 aa21.99■■□□□ 1.11
TPCN1-201ENST00000335509 ZBTB47Q9UFB7 747 aaPredicted RBP21.97■■□□□ 1.11
TPCN1-201ENST00000335509 HNRNPUQ00839 825 aaKnown RBP eCLIP21.92■■□□□ 1.1
TPCN1-201ENST00000335509 TONSLQ96HA7 1378 aa21.91■■□□□ 1.1
TPCN1-201ENST00000335509 DCAF1Q9Y4B6 1507 aa21.9■■□□□ 1.1
TPCN1-201ENST00000335509 NPM2Q86SE8 214 aaKnown RBP21.9■■□□□ 1.1
TPCN1-201ENST00000335509 ANP32AP39687 249 aaKnown RBP21.89■■□□□ 1.09
TPCN1-201ENST00000335509 SLC24A1O60721 1099 aa21.88■■□□□ 1.09
TPCN1-201ENST00000335509 FAM9BQ8IZU0 186 aa21.86■■□□□ 1.09
TPCN1-201ENST00000335509 NEFMP07197 916 aa21.82■■□□□ 1.08
TPCN1-201ENST00000335509 SALL2Q9Y467 1007 aaPredicted RBP21.81■■□□□ 1.08
TPCN1-201ENST00000335509 SCRIBQ14160 1630 aa21.81■■□□□ 1.08
TPCN1-201ENST00000335509 CHIC2Q9UKJ5 165 aa21.8■■□□□ 1.08
TPCN1-201ENST00000335509 MIER1Q8N108 512 aa21.76■■□□□ 1.07
TPCN1-201ENST00000335509 HIRIP3Q9BW71 556 aaPredicted RBP21.73■■□□□ 1.07
TPCN1-201ENST00000335509 ZCCHC6Q5VYS8 1495 aaKnown RBP21.72■■□□□ 1.07
TPCN1-201ENST00000335509 SCAF1Q9H7N4 1312 aaKnown RBP21.71■■□□□ 1.07
TPCN1-201ENST00000335509 CHGAP10645 457 aaKnown RBP21.69■■□□□ 1.06
TPCN1-201ENST00000335509 TMC1Q8TDI8 760 aa21.65■■□□□ 1.06
TPCN1-201ENST00000335509 MRS2Q9HD23 443 aa21.62■■□□□ 1.05
TPCN1-201ENST00000335509 CCDC136Q96JN2 1154 aa21.62■■□□□ 1.05
TPCN1-201ENST00000335509 IRX6P78412 446 aaPredicted RBP21.6■■□□□ 1.05
TPCN1-201ENST00000335509 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.59■■□□□ 1.054e-7■■□□□ 13.1
TPCN1-201ENST00000335509 KDM2AQ9Y2K7 1162 aa21.57■■□□□ 1.04
TPCN1-201ENST00000335509 MYO15BQ96JP2 1530 aa21.57■■□□□ 1.04
TPCN1-201ENST00000335509 CLIP1P30622 1438 aa21.54■■□□□ 1.04
TPCN1-201ENST00000335509 MTUS2Q5JR59 1369 aa21.52■■□□□ 1.04
TPCN1-201ENST00000335509 HSP90AA1P07900 732 aaKnown RBP21.51■■□□□ 1.03
TPCN1-201ENST00000335509 EIF5BO60841 1220 aaKnown RBP21.51■■□□□ 1.03
TPCN1-201ENST00000335509 NBR1Q14596 966 aa21.49■■□□□ 1.03
TPCN1-201ENST00000335509 TSPY4P0CV99 314 aa21.49■■□□□ 1.03
TPCN1-201ENST00000335509 TSPY10P0CW01 314 aa21.49■■□□□ 1.03
TPCN1-201ENST00000335509 STAG3Q9UJ98 1225 aa21.49■■□□□ 1.03
TPCN1-201ENST00000335509 UPF2Q9HAU5 1272 aaKnown RBP21.47■■□□□ 1.03
TPCN1-201ENST00000335509 RRP7BPQ9NSQ0 103 aa21.46■■□□□ 1.03
TPCN1-201ENST00000335509 ESF1Q9H501 851 aaKnown RBP21.45■■□□□ 1.02
TPCN1-201ENST00000335509 EIF4G2P78344 907 aaKnown RBP eCLIP21.43■■□□□ 1.024e-15■■■■■ 38.4
TPCN1-201ENST00000335509 SENP3-EIF4A1A0A087X0R7 540 aa21.4■■□□□ 1.02
TPCN1-201ENST00000335509 WDR43Q15061 677 aaKnown RBP eCLIP21.4■■□□□ 1.02
TPCN1-201ENST00000335509 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.4■■□□□ 1.02
TPCN1-201ENST00000335509 PLPPR3Q6T4P5 718 aa21.39■■□□□ 1.02
TPCN1-201ENST00000335509 CEP162Q5TB80 1403 aa21.37■■□□□ 1.01
TPCN1-201ENST00000335509 NPM1P06748 294 aaKnown RBP eCLIP21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms