RNA–Protein interactions for RNA: ENST00000332624.7

TRAK2-201, Transcript of trafficking kinesin protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAK2, Length 6,510 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK2-201ENST00000332624 DCAF8L2P0C7V8 631 aa17.44■□□□□ 0.38
TRAK2-201ENST00000332624 SUPT5HO00267 1087 aaKnown RBP16.76■□□□□ 0.27
TRAK2-201ENST00000332624 NISCHQ9Y2I1 1504 aa16.71■□□□□ 0.27
TRAK2-201ENST00000332624 SHROOM4Q9ULL8 1493 aa16.43■□□□□ 0.22
TRAK2-201ENST00000332624 EHMT2Q96KQ7 1210 aa16.2■□□□□ 0.18
TRAK2-201ENST00000332624 FAM9AQ8IZU1 332 aaPredicted RBP15.8■□□□□ 0.12
TRAK2-201ENST00000332624 PCGF6Q9BYE7 350 aa15.77■□□□□ 0.11
TRAK2-201ENST00000332624 APLP2Q06481 763 aa15.76■□□□□ 0.11
TRAK2-201ENST00000332624 PELP1Q8IZL8 1130 aaKnown RBP15.75■□□□□ 0.11
TRAK2-201ENST00000332624 TTBK1Q5TCY1 1321 aaPredicted RBP15.66■□□□□ 0.1
TRAK2-201ENST00000332624 TRIM41Q8WV44 630 aa15.47■□□□□ 0.07
TRAK2-201ENST00000332624 RANGAP1P46060 587 aaPredicted RBP15.43■□□□□ 0.06
TRAK2-201ENST00000332624 CCER1Q8TC90 406 aaPredicted RBP15.39■□□□□ 0.05
TRAK2-201ENST00000332624 ZEB1P37275 1124 aaPredicted RBP15.38■□□□□ 0.05
TRAK2-201ENST00000332624 CENPBP07199 599 aaPredicted RBP15.35■□□□□ 0.05
TRAK2-201ENST00000332624 UBTFP17480 764 aaKnown RBP15.26■□□□□ 0.03
TRAK2-201ENST00000332624 ATP1B4Q9UN42 357 aaPredicted RBP15.21■□□□□ 0.03
TRAK2-201ENST00000332624 PPARGC1BQ86YN6 1023 aaKnown RBP15.15■□□□□ 0.02
TRAK2-201ENST00000332624 MYT1Q01538 1121 aa15.1■□□□□ 0.01
TRAK2-201ENST00000332624 YTHDC1Q96MU7 727 aaKnown RBP15.09■□□□□ 0.01
TRAK2-201ENST00000332624 ERICH6Q7L0X2 663 aa15.09■□□□□ 0.01
TRAK2-201ENST00000332624 TRIM26Q12899 539 aaPredicted RBP15.04■□□□□ -0
TRAK2-201ENST00000332624 HRCP23327 699 aa14.98□□□□□ -0.01
TRAK2-201ENST00000332624 LOC105371045A0A1W2PR82 267 aa14.97□□□□□ -0.01
TRAK2-201ENST00000332624 NEFLP07196 543 aa14.96□□□□□ -0.01
TRAK2-201ENST00000332624 CHIC1Q5VXU3 224 aa14.94□□□□□ -0.02
TRAK2-201ENST00000332624 ITGAEP38570 1179 aa14.81□□□□□ -0.04
TRAK2-201ENST00000332624 HNRNPUL2Q1KMD3 747 aaKnown RBP14.76□□□□□ -0.05
TRAK2-201ENST00000332624 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.65□□□□□ -0.06
TRAK2-201ENST00000332624 POLR3GLQ9BT43 218 aa14.64□□□□□ -0.07
TRAK2-201ENST00000332624 CNGB1Q14028 1251 aaPredicted RBP14.56□□□□□ -0.08
TRAK2-201ENST00000332624 DIEXFQ68CQ4 756 aaKnown RBP14.55□□□□□ -0.08
TRAK2-201ENST00000332624 MYT1LQ9UL68 1186 aa14.51□□□□□ -0.09
TRAK2-201ENST00000332624 DAXXQ9UER7 740 aaPredicted RBP14.46□□□□□ -0.1
TRAK2-201ENST00000332624 FAM50AQ14320 339 aaKnown RBP14.39□□□□□ -0.11
TRAK2-201ENST00000332624 PABPN1Q86U42 306 aaKnown RBP eCLIP14.35□□□□□ -0.11
TRAK2-201ENST00000332624 NEUROD1Q13562 356 aa14.32□□□□□ -0.12
TRAK2-201ENST00000332624 ABCC9O60706 1549 aa14.31□□□□□ -0.12
TRAK2-201ENST00000332624 GTF3C3Q9Y5Q9 886 aa14.29□□□□□ -0.12
TRAK2-201ENST00000332624 TRIM52Q96A61 297 aa14.29□□□□□ -0.12
TRAK2-201ENST00000332624 SLC4A1APQ9BWU0 796 aaKnown RBP14.26□□□□□ -0.13
TRAK2-201ENST00000332624 BCANQ96GW7 911 aa14.24□□□□□ -0.13
TRAK2-201ENST00000332624 CLSPNQ9HAW4 1339 aa14.2□□□□□ -0.14
TRAK2-201ENST00000332624 ZNF316A6NFI3 1004 aaPredicted RBP14.19□□□□□ -0.14
TRAK2-201ENST00000332624 RTL5Q5HYW3 569 aaPredicted RBP14.19□□□□□ -0.14
TRAK2-201ENST00000332624 ANP32CO43423 234 aa14.16□□□□□ -0.14
TRAK2-201ENST00000332624 ZNF326Q5BKZ1 582 aaKnown RBP14.15□□□□□ -0.14
TRAK2-201ENST00000332624 CSRNP3Q8WYN3 585 aa14.13□□□□□ -0.15
TRAK2-201ENST00000332624 ACIN1Q9UKV3 1341 aaKnown RBP14.08□□□□□ -0.15
TRAK2-201ENST00000332624 P3H3Q8IVL6 736 aa14.07□□□□□ -0.16
TRAK2-201ENST00000332624 CDK11AQ9UQ88 783 aaPredicted RBP14.04□□□□□ -0.16
TRAK2-201ENST00000332624 FBLN2P98095 1184 aa14.02□□□□□ -0.16
TRAK2-201ENST00000332624 ARID3CA6NKF2 412 aa14.01□□□□□ -0.17
TRAK2-201ENST00000332624 DCAF1Q9Y4B6 1507 aa13.9□□□□□ -0.18
TRAK2-201ENST00000332624 ZNF777Q9ULD5 760 aaPredicted RBP13.89□□□□□ -0.19
TRAK2-201ENST00000332624 CANXP27824 592 aaKnown RBP13.86□□□□□ -0.19
TRAK2-201ENST00000332624 ZBTB47Q9UFB7 747 aaPredicted RBP13.84□□□□□ -0.19
TRAK2-201ENST00000332624 BCL11AQ9H165 835 aa13.84□□□□□ -0.19
TRAK2-201ENST00000332624 FKBP8Q14318 412 aa13.84□□□□□ -0.19
TRAK2-201ENST00000332624 SCRIBQ14160 1630 aa13.83□□□□□ -0.19
TRAK2-201ENST00000332624 ZCCHC6Q5VYS8 1495 aaKnown RBP13.83□□□□□ -0.19
TRAK2-201ENST00000332624 DDX10Q13206 875 aaKnown RBP13.83□□□□□ -0.2
TRAK2-201ENST00000332624 TONSLQ96HA7 1378 aa13.82□□□□□ -0.2
TRAK2-201ENST00000332624 ANP32AP39687 249 aaKnown RBP13.8□□□□□ -0.2
TRAK2-201ENST00000332624 HNRNPUQ00839 825 aaKnown RBP eCLIP13.79□□□□□ -0.2
TRAK2-201ENST00000332624 NPM2Q86SE8 214 aaKnown RBP13.77□□□□□ -0.2
TRAK2-201ENST00000332624 SLC24A1O60721 1099 aa13.75□□□□□ -0.21
TRAK2-201ENST00000332624 NEFMP07197 916 aa13.75□□□□□ -0.21
TRAK2-201ENST00000332624 FAM9BQ8IZU0 186 aa13.75□□□□□ -0.21
TRAK2-201ENST00000332624 CHIC2Q9UKJ5 165 aa13.72□□□□□ -0.21
TRAK2-201ENST00000332624 MIER1Q8N108 512 aa13.69□□□□□ -0.22
TRAK2-201ENST00000332624 SALL2Q9Y467 1007 aaPredicted RBP13.69□□□□□ -0.22
TRAK2-201ENST00000332624 SCAF1Q9H7N4 1312 aaKnown RBP13.67□□□□□ -0.22
TRAK2-201ENST00000332624 MYO15BQ96JP2 1530 aa13.65□□□□□ -0.22
TRAK2-201ENST00000332624 CHGAP10645 457 aaKnown RBP13.64□□□□□ -0.23
TRAK2-201ENST00000332624 HIRIP3Q9BW71 556 aaPredicted RBP13.64□□□□□ -0.23
TRAK2-201ENST00000332624 TMC1Q8TDI8 760 aa13.63□□□□□ -0.23
TRAK2-201ENST00000332624 CLIP1P30622 1438 aa13.62□□□□□ -0.23
TRAK2-201ENST00000332624 MRS2Q9HD23 443 aa13.61□□□□□ -0.23
TRAK2-201ENST00000332624 CCDC136Q96JN2 1154 aa13.6□□□□□ -0.23
TRAK2-201ENST00000332624 MTUS2Q5JR59 1369 aa13.59□□□□□ -0.23
TRAK2-201ENST00000332624 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.58□□□□□ -0.238e-7■□□□□ 11
TRAK2-201ENST00000332624 IRX6P78412 446 aaPredicted RBP13.57□□□□□ -0.24
TRAK2-201ENST00000332624 KDM2AQ9Y2K7 1162 aa13.57□□□□□ -0.24
TRAK2-201ENST00000332624 HSP90AA1P07900 732 aaKnown RBP13.54□□□□□ -0.24
TRAK2-201ENST00000332624 TSPY4P0CV99 314 aa13.54□□□□□ -0.24
TRAK2-201ENST00000332624 TSPY10P0CW01 314 aa13.54□□□□□ -0.24
TRAK2-201ENST00000332624 UPF2Q9HAU5 1272 aaKnown RBP13.53□□□□□ -0.24
TRAK2-201ENST00000332624 STAG3Q9UJ98 1225 aa13.53□□□□□ -0.24
TRAK2-201ENST00000332624 CEP162Q5TB80 1403 aa13.53□□□□□ -0.24
TRAK2-201ENST00000332624 RSF1Q96T23 1441 aaPredicted RBP13.53□□□□□ -0.24
TRAK2-201ENST00000332624 EIF5BO60841 1220 aaKnown RBP13.52□□□□□ -0.24
TRAK2-201ENST00000332624 ESF1Q9H501 851 aaKnown RBP13.52□□□□□ -0.25
TRAK2-201ENST00000332624 RRP7BPQ9NSQ0 103 aa13.52□□□□□ -0.25
TRAK2-201ENST00000332624 NBR1Q14596 966 aa13.51□□□□□ -0.25
TRAK2-201ENST00000332624 EIF4G2P78344 907 aaKnown RBP eCLIP13.51□□□□□ -0.25
TRAK2-201ENST00000332624 WDR43Q15061 677 aaKnown RBP eCLIP13.49□□□□□ -0.25
TRAK2-201ENST00000332624 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.48□□□□□ -0.25
TRAK2-201ENST00000332624 GOLGA3Q08378 1498 aa13.47□□□□□ -0.25
TRAK2-201ENST00000332624 EEA1Q15075 1411 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms