RNA–Protein interactions for RNA: ENST00000331835.9

SELENOF-201, Transcript of selenoprotein F, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SELENOF, Length 1,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SELENOF-201ENST00000331835 NISCHQ9Y2I1 1504 aa36.13■■■■□ 3.37
SELENOF-201ENST00000331835 CCDC180Q9P1Z9 1646 aa30.92■■■□□ 2.54
SELENOF-201ENST00000331835 ZCCHC6Q5VYS8 1495 aaKnown RBP30.68■■■□□ 2.5
SELENOF-201ENST00000331835 SHROOM4Q9ULL8 1493 aa30.22■■■□□ 2.43
SELENOF-201ENST00000331835 DCAF1Q9Y4B6 1507 aa30.06■■■□□ 2.4
SELENOF-201ENST00000331835 SUPT5HO00267 1087 aaKnown RBP29.88■■■□□ 2.37
SELENOF-201ENST00000331835 CHIC1Q5VXU3 224 aa29.52■■■□□ 2.32
SELENOF-201ENST00000331835 MYO15BQ96JP2 1530 aa29.3■■■□□ 2.28
SELENOF-201ENST00000331835 HRCP23327 699 aa29.23■■■□□ 2.27
SELENOF-201ENST00000331835 DCAF8L2P0C7V8 631 aa29.06■■■□□ 2.24
SELENOF-201ENST00000331835 ABCC9O60706 1549 aa29.02■■■□□ 2.24
SELENOF-201ENST00000331835 PCGF6Q9BYE7 350 aa28.66■■■□□ 2.18
SELENOF-201ENST00000331835 RSF1Q96T23 1441 aaPredicted RBP28.56■■■□□ 2.16
SELENOF-201ENST00000331835 RB1CC1Q8TDY2 1594 aa28.52■■■□□ 2.16
SELENOF-201ENST00000331835 TRIM26Q12899 539 aaPredicted RBP28.48■■■□□ 2.15
SELENOF-201ENST00000331835 NACADO15069 1562 aa28.43■■■□□ 2.14
SELENOF-201ENST00000331835 SCRIBQ14160 1630 aa28.42■■■□□ 2.14
SELENOF-201ENST00000331835 ZEB1P37275 1124 aaPredicted RBP28.32■■■□□ 2.12
SELENOF-201ENST00000331835 LOC105371045A0A1W2PR82 267 aa28.28■■■□□ 2.12
SELENOF-201ENST00000331835 TRIM41Q8WV44 630 aa28.12■■■□□ 2.09
SELENOF-201ENST00000331835 PPARGC1BQ86YN6 1023 aaKnown RBP27.96■■■□□ 2.07
SELENOF-201ENST00000331835 BAZ1AQ9NRL2 1556 aaPredicted RBP27.91■■■□□ 2.06
SELENOF-201ENST00000331835 MROH2BQ7Z745 1585 aa27.87■■■□□ 2.05
SELENOF-201ENST00000331835 CECR2Q9BXF3 1484 aa27.8■■■□□ 2.04
SELENOF-201ENST00000331835 EIF4G1Q04637 1599 aaKnown RBP27.75■■■□□ 2.03
SELENOF-201ENST00000331835 WIZO95785 1651 aa27.71■■■□□ 2.03
SELENOF-201ENST00000331835 TOP2AP11388 1531 aaKnown RBP27.6■■■□□ 2.01
SELENOF-201ENST00000331835 WRNQ14191 1432 aaPredicted RBP eCLIP27.48■■□□□ 1.99
SELENOF-201ENST00000331835 EEA1Q15075 1411 aa27.47■■□□□ 1.99
SELENOF-201ENST00000331835 PELP1Q8IZL8 1130 aaKnown RBP27.45■■□□□ 1.99
SELENOF-201ENST00000331835 SMARCA4P51532 1647 aa27.45■■□□□ 1.98
SELENOF-201ENST00000331835 FAM9AQ8IZU1 332 aaPredicted RBP27.44■■□□□ 1.98
SELENOF-201ENST00000331835 SMARCA2P51531 1590 aa27.32■■□□□ 1.96
SELENOF-201ENST00000331835 CCDC88BA6NC98 1476 aa27.25■■□□□ 1.95
SELENOF-201ENST00000331835 TNIKQ9UKE5 1360 aa27.24■■□□□ 1.95
SELENOF-201ENST00000331835 UNC13AQ9UPW8 1703 aa27.17■■□□□ 1.94
SELENOF-201ENST00000331835 PEG3Q9GZU2 1588 aa27.17■■□□□ 1.94
SELENOF-201ENST00000331835 CEP162Q5TB80 1403 aa27.12■■□□□ 1.93
SELENOF-201ENST00000331835 ABCC8Q09428 1581 aa27.07■■□□□ 1.92
SELENOF-201ENST00000331835 GOLGA3Q08378 1498 aa27.02■■□□□ 1.92
SELENOF-201ENST00000331835 CCER1Q8TC90 406 aaPredicted RBP27.01■■□□□ 1.91
SELENOF-201ENST00000331835 CSRNP3Q8WYN3 585 aa26.96■■□□□ 1.91
SELENOF-201ENST00000331835 KIF21BO75037 1637 aa26.93■■□□□ 1.9
SELENOF-201ENST00000331835 SOGA1O94964 1423 aa26.89■■□□□ 1.9
SELENOF-201ENST00000331835 CEP164Q9UPV0 1460 aa26.88■■□□□ 1.89
SELENOF-201ENST00000331835 SCAF1Q9H7N4 1312 aaKnown RBP26.85■■□□□ 1.89
SELENOF-201ENST00000331835 EHMT2Q96KQ7 1210 aa26.84■■□□□ 1.89
SELENOF-201ENST00000331835 BAZ1BQ9UIG0 1483 aaKnown RBP26.84■■□□□ 1.89
SELENOF-201ENST00000331835 BICRAQ9NZM4 1560 aa26.82■■□□□ 1.88
SELENOF-201ENST00000331835 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.82■■□□□ 1.88
SELENOF-201ENST00000331835 CENPBP07199 599 aaPredicted RBP26.78■■□□□ 1.88
SELENOF-201ENST00000331835 ACIN1Q9UKV3 1341 aaKnown RBP26.76■■□□□ 1.87
SELENOF-201ENST00000331835 DIEXFQ68CQ4 756 aaKnown RBP26.71■■□□□ 1.87
SELENOF-201ENST00000331835 UBTFP17480 764 aaKnown RBP26.66■■□□□ 1.86
SELENOF-201ENST00000331835 RUSC2Q8N2Y8 1516 aa26.63■■□□□ 1.85
SELENOF-201ENST00000331835 SYNJ1O43426 1573 aa26.63■■□□□ 1.85
SELENOF-201ENST00000331835 VPS8Q8N3P4 1428 aa26.61■■□□□ 1.85
SELENOF-201ENST00000331835 ATAD2BQ9ULI0 1458 aa26.61■■□□□ 1.85
SELENOF-201ENST00000331835 CLIP1P30622 1438 aa26.58■■□□□ 1.84
SELENOF-201ENST00000331835 ZNF316A6NFI3 1004 aaPredicted RBP26.55■■□□□ 1.84
SELENOF-201ENST00000331835 TOP2BQ02880 1626 aa26.52■■□□□ 1.84
SELENOF-201ENST00000331835 ERICH3Q5RHP9 1530 aa26.51■■□□□ 1.83
SELENOF-201ENST00000331835 CLSPNQ9HAW4 1339 aa26.49■■□□□ 1.83
SELENOF-201ENST00000331835 BIVM-ERCC5R4GMW8 1640 aa26.48■■□□□ 1.83
SELENOF-201ENST00000331835 NEUROD1Q13562 356 aa26.44■■□□□ 1.82
SELENOF-201ENST00000331835 APLP2Q06481 763 aa26.38■■□□□ 1.81
SELENOF-201ENST00000331835 MYT1Q01538 1121 aa26.36■■□□□ 1.81
SELENOF-201ENST00000331835 HMGXB3Q12766 1538 aa26.33■■□□□ 1.81
SELENOF-201ENST00000331835 RAPGEF2Q9Y4G8 1499 aa26.33■■□□□ 1.81
SELENOF-201ENST00000331835 PRXQ9BXM0 1461 aa26.3■■□□□ 1.8
SELENOF-201ENST00000331835 PABPN1Q86U42 306 aaKnown RBP eCLIP26.25■■□□□ 1.79
SELENOF-201ENST00000331835 GTF3C3Q9Y5Q9 886 aa26.25■■□□□ 1.79
SELENOF-201ENST00000331835 NCAPD3P42695 1498 aa26.2■■□□□ 1.78
SELENOF-201ENST00000331835 TTBK1Q5TCY1 1321 aaPredicted RBP26.16■■□□□ 1.78
SELENOF-201ENST00000331835 CUX2O14529 1486 aa26.13■■□□□ 1.77
SELENOF-201ENST00000331835 KIF27Q86VH2 1401 aa26.1■■□□□ 1.77
SELENOF-201ENST00000331835 RRBP1Q9P2E9 1410 aaKnown RBP26.1■■□□□ 1.77
SELENOF-201ENST00000331835 ARAP1Q96P48 1450 aa26.09■■□□□ 1.77
SELENOF-201ENST00000331835 HNRNPUL2Q1KMD3 747 aaKnown RBP26.07■■□□□ 1.76
SELENOF-201ENST00000331835 PRDM2Q13029 1718 aa26.04■■□□□ 1.76
SELENOF-201ENST00000331835 MAP3K1Q13233 1512 aa26.04■■□□□ 1.76
SELENOF-201ENST00000331835 CFTRP13569 1480 aa26.01■■□□□ 1.75
SELENOF-201ENST00000331835 CUX1P39880 1505 aa25.99■■□□□ 1.75
SELENOF-201ENST00000331835 DHX57Q6P158 1386 aaKnown RBP25.99■■□□□ 1.75
SELENOF-201ENST00000331835 MIER1Q8N108 512 aa25.93■■□□□ 1.74
SELENOF-201ENST00000331835 CCNB3Q8WWL7 1395 aa25.84■■□□□ 1.73
SELENOF-201ENST00000331835 ARHGAP35Q9NRY4 1499 aa25.82■■□□□ 1.72
SELENOF-201ENST00000331835 TIAM1Q13009 1591 aa25.73■■□□□ 1.71
SELENOF-201ENST00000331835 FHAD1B1AJZ9 1412 aa25.7■■□□□ 1.7
SELENOF-201ENST00000331835 KANK4Q5T7N3 995 aaPredicted RBP25.69■■□□□ 1.7
SELENOF-201ENST00000331835 YTHDC1Q96MU7 727 aaKnown RBP25.68■■□□□ 1.7
SELENOF-201ENST00000331835 TIMELESSQ9UNS1 1208 aa25.67■■□□□ 1.7
SELENOF-201ENST00000331835 IGF1RP08069 1367 aa25.64■■□□□ 1.69
SELENOF-201ENST00000331835 CFAP43Q8NDM7 1665 aa25.63■■□□□ 1.69
SELENOF-201ENST00000331835 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.62■■□□□ 1.698e-8■■□□□ 11.8
SELENOF-201ENST00000331835 LRRC9Q6ZRR7 1453 aa25.58■■□□□ 1.69
SELENOF-201ENST00000331835 CADPSQ9ULU8 1353 aa25.58■■□□□ 1.69
SELENOF-201ENST00000331835 EFCAB5A4FU69 1503 aa25.57■■□□□ 1.68
SELENOF-201ENST00000331835 SETD5Q9C0A6 1442 aa25.55■■□□□ 1.68
SELENOF-201ENST00000331835 CARMIL1Q5VZK9 1371 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms