RNA–Protein interactions for RNA: ENST00000330847.1

NR4A3-201, Transcript of nuclear receptor subfamily 4 group A member 3, humanhuman

APPRIS P4 TSL 5 BASIC

Gene NR4A3, Length 4,982 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A3-201ENST00000330847 DCAF8L2P0C7V8 631 aa26.25■■□□□ 1.79
NR4A3-201ENST00000330847 SUPT5HO00267 1087 aaKnown RBP25.34■■□□□ 1.65
NR4A3-201ENST00000330847 NISCHQ9Y2I1 1504 aa25.14■■□□□ 1.62
NR4A3-201ENST00000330847 SHROOM4Q9ULL8 1493 aa24.8■■□□□ 1.56
NR4A3-201ENST00000330847 EHMT2Q96KQ7 1210 aa24.46■■□□□ 1.51
NR4A3-201ENST00000330847 PCGF6Q9BYE7 350 aa23.96■■□□□ 1.43
NR4A3-201ENST00000330847 FAM9AQ8IZU1 332 aaPredicted RBP23.89■■□□□ 1.42
NR4A3-201ENST00000330847 PELP1Q8IZL8 1130 aaKnown RBP23.87■■□□□ 1.41
NR4A3-201ENST00000330847 APLP2Q06481 763 aa23.78■■□□□ 1.4
NR4A3-201ENST00000330847 TTBK1Q5TCY1 1321 aaPredicted RBP23.67■■□□□ 1.38
NR4A3-201ENST00000330847 ZEB1P37275 1124 aaPredicted RBP23.38■■□□□ 1.33
NR4A3-201ENST00000330847 TRIM41Q8WV44 630 aa23.38■■□□□ 1.33
NR4A3-201ENST00000330847 CENPBP07199 599 aaPredicted RBP23.34■■□□□ 1.33
NR4A3-201ENST00000330847 CCER1Q8TC90 406 aaPredicted RBP23.33■■□□□ 1.32
NR4A3-201ENST00000330847 RANGAP1P46060 587 aaPredicted RBP23.26■■□□□ 1.31
NR4A3-201ENST00000330847 UBTFP17480 764 aaKnown RBP23.03■■□□□ 1.28
NR4A3-201ENST00000330847 PPARGC1BQ86YN6 1023 aaKnown RBP22.95■■□□□ 1.26
NR4A3-201ENST00000330847 YTHDC1Q96MU7 727 aaKnown RBP22.92■■□□□ 1.26
NR4A3-201ENST00000330847 ATP1B4Q9UN42 357 aaPredicted RBP22.92■■□□□ 1.26
NR4A3-201ENST00000330847 ERICH6Q7L0X2 663 aa22.92■■□□□ 1.26
NR4A3-201ENST00000330847 HRCP23327 699 aa22.85■■□□□ 1.25
NR4A3-201ENST00000330847 TRIM26Q12899 539 aaPredicted RBP22.84■■□□□ 1.25
NR4A3-201ENST00000330847 LOC105371045A0A1W2PR82 267 aa22.71■■□□□ 1.23
NR4A3-201ENST00000330847 NEFLP07196 543 aa22.69■■□□□ 1.22
NR4A3-201ENST00000330847 CHIC1Q5VXU3 224 aa22.67■■□□□ 1.22
NR4A3-201ENST00000330847 MYT1Q01538 1121 aa22.51■■□□□ 1.19
NR4A3-201ENST00000330847 ITGAEP38570 1179 aa22.38■■□□□ 1.17
NR4A3-201ENST00000330847 HNRNPUL2Q1KMD3 747 aaKnown RBP22.35■■□□□ 1.17
NR4A3-201ENST00000330847 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.23■■□□□ 1.15
NR4A3-201ENST00000330847 DIEXFQ68CQ4 756 aaKnown RBP22.12■■□□□ 1.13
NR4A3-201ENST00000330847 POLR3GLQ9BT43 218 aa22.11■■□□□ 1.13
NR4A3-201ENST00000330847 CNGB1Q14028 1251 aaPredicted RBP22.01■■□□□ 1.11
NR4A3-201ENST00000330847 DAXXQ9UER7 740 aaPredicted RBP21.91■■□□□ 1.1
NR4A3-201ENST00000330847 MYT1LQ9UL68 1186 aa21.79■■□□□ 1.08
NR4A3-201ENST00000330847 GTF3C3Q9Y5Q9 886 aa21.79■■□□□ 1.08
NR4A3-201ENST00000330847 FAM50AQ14320 339 aaKnown RBP21.73■■□□□ 1.07
NR4A3-201ENST00000330847 NEUROD1Q13562 356 aa21.66■■□□□ 1.06
NR4A3-201ENST00000330847 BCANQ96GW7 911 aa21.64■■□□□ 1.05
NR4A3-201ENST00000330847 ZNF316A6NFI3 1004 aaPredicted RBP21.57■■□□□ 1.04
NR4A3-201ENST00000330847 RTL5Q5HYW3 569 aaPredicted RBP21.57■■□□□ 1.04
NR4A3-201ENST00000330847 TRIM52Q96A61 297 aa21.57■■□□□ 1.04
NR4A3-201ENST00000330847 PABPN1Q86U42 306 aaKnown RBP eCLIP21.55■■□□□ 1.04
NR4A3-201ENST00000330847 CLSPNQ9HAW4 1339 aa21.49■■□□□ 1.03
NR4A3-201ENST00000330847 SLC4A1APQ9BWU0 796 aaKnown RBP21.49■■□□□ 1.03
NR4A3-201ENST00000330847 ACIN1Q9UKV3 1341 aaKnown RBP21.49■■□□□ 1.03
NR4A3-201ENST00000330847 ANP32CO43423 234 aa21.47■■□□□ 1.03
NR4A3-201ENST00000330847 ABCC9O60706 1549 aa21.42■■□□□ 1.02
NR4A3-201ENST00000330847 CSRNP3Q8WYN3 585 aa21.36■■□□□ 1.01
NR4A3-201ENST00000330847 ZNF326Q5BKZ1 582 aaKnown RBP21.36■■□□□ 1.01
NR4A3-201ENST00000330847 CDK11AQ9UQ88 783 aaPredicted RBP21.34■■□□□ 1.01
NR4A3-201ENST00000330847 P3H3Q8IVL6 736 aa21.22■□□□□ 0.99
NR4A3-201ENST00000330847 DCAF1Q9Y4B6 1507 aa21.1■□□□□ 0.97
NR4A3-201ENST00000330847 ARID3CA6NKF2 412 aa21.09■□□□□ 0.97
NR4A3-201ENST00000330847 FBLN2P98095 1184 aa21.05■□□□□ 0.96
NR4A3-201ENST00000330847 FKBP8Q14318 412 aa21.04■□□□□ 0.96
NR4A3-201ENST00000330847 DDX10Q13206 875 aaKnown RBP20.98■□□□□ 0.95
NR4A3-201ENST00000330847 ZCCHC6Q5VYS8 1495 aaKnown RBP20.97■□□□□ 0.95
NR4A3-201ENST00000330847 ANP32AP39687 249 aaKnown RBP20.95■□□□□ 0.94
NR4A3-201ENST00000330847 CANXP27824 592 aaKnown RBP20.95■□□□□ 0.94
NR4A3-201ENST00000330847 HNRNPUQ00839 825 aaKnown RBP eCLIP20.92■□□□□ 0.94
NR4A3-201ENST00000330847 ZBTB47Q9UFB7 747 aaPredicted RBP20.91■□□□□ 0.94
NR4A3-201ENST00000330847 ZNF777Q9ULD5 760 aaPredicted RBP20.91■□□□□ 0.94
NR4A3-201ENST00000330847 BCL11AQ9H165 835 aa20.91■□□□□ 0.94
NR4A3-201ENST00000330847 SCAF1Q9H7N4 1312 aaKnown RBP20.91■□□□□ 0.94
NR4A3-201ENST00000330847 NPM2Q86SE8 214 aaKnown RBP20.9■□□□□ 0.94
NR4A3-201ENST00000330847 TONSLQ96HA7 1378 aa20.9■□□□□ 0.94
NR4A3-201ENST00000330847 CCDC180Q9P1Z9 1646 aa20.86■□□□□ 0.93
NR4A3-201ENST00000330847 MIER1Q8N108 512 aa20.84■□□□□ 0.93
NR4A3-201ENST00000330847 FAM9BQ8IZU0 186 aa20.83■□□□□ 0.93
NR4A3-201ENST00000330847 SCRIBQ14160 1630 aa20.76■□□□□ 0.91
NR4A3-201ENST00000330847 NEFMP07197 916 aa20.73■□□□□ 0.91
NR4A3-201ENST00000330847 SALL2Q9Y467 1007 aaPredicted RBP20.73■□□□□ 0.91
NR4A3-201ENST00000330847 MYO15BQ96JP2 1530 aa20.71■□□□□ 0.91
NR4A3-201ENST00000330847 SLC24A1O60721 1099 aa20.7■□□□□ 0.9
NR4A3-201ENST00000330847 CHIC2Q9UKJ5 165 aa20.7■□□□□ 0.9
NR4A3-201ENST00000330847 HIRIP3Q9BW71 556 aaPredicted RBP20.68■□□□□ 0.9
NR4A3-201ENST00000330847 CCDC136Q96JN2 1154 aa20.65■□□□□ 0.9
NR4A3-201ENST00000330847 TMC1Q8TDI8 760 aa20.63■□□□□ 0.89
NR4A3-201ENST00000330847 MRS2Q9HD23 443 aa20.62■□□□□ 0.89
NR4A3-201ENST00000330847 IRX6P78412 446 aaPredicted RBP20.61■□□□□ 0.89
NR4A3-201ENST00000330847 EIF5BO60841 1220 aaKnown RBP20.58■□□□□ 0.88
NR4A3-201ENST00000330847 CLIP1P30622 1438 aa20.57■□□□□ 0.88
NR4A3-201ENST00000330847 NBR1Q14596 966 aa20.56■□□□□ 0.88
NR4A3-201ENST00000330847 CHGAP10645 457 aaKnown RBP20.54■□□□□ 0.88
NR4A3-201ENST00000330847 UPF2Q9HAU5 1272 aaKnown RBP20.5■□□□□ 0.87
NR4A3-201ENST00000330847 HSP90AA1P07900 732 aaKnown RBP20.5■□□□□ 0.87
NR4A3-201ENST00000330847 KDM2AQ9Y2K7 1162 aa20.49■□□□□ 0.87
NR4A3-201ENST00000330847 MTUS2Q5JR59 1369 aa20.48■□□□□ 0.87
NR4A3-201ENST00000330847 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.47■□□□□ 0.87
NR4A3-201ENST00000330847 EIF4G2P78344 907 aaKnown RBP eCLIP20.45■□□□□ 0.86
NR4A3-201ENST00000330847 CEP162Q5TB80 1403 aa20.44■□□□□ 0.86
NR4A3-201ENST00000330847 ANP32BQ92688 251 aaKnown RBP20.41■□□□□ 0.86
NR4A3-201ENST00000330847 RRP7BPQ9NSQ0 103 aa20.41■□□□□ 0.86
NR4A3-201ENST00000330847 TSPY4P0CV99 314 aa20.41■□□□□ 0.86
NR4A3-201ENST00000330847 TSPY10P0CW01 314 aa20.41■□□□□ 0.86
NR4A3-201ENST00000330847 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.41■□□□□ 0.86
NR4A3-201ENST00000330847 RSF1Q96T23 1441 aaPredicted RBP20.41■□□□□ 0.86
NR4A3-201ENST00000330847 WDR43Q15061 677 aaKnown RBP eCLIP20.39■□□□□ 0.86
NR4A3-201ENST00000330847 STAG3Q9UJ98 1225 aa20.34■□□□□ 0.85
NR4A3-201ENST00000330847 ARXQ96QS3 562 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms