RNA–Protein interactions for RNA: ENST00000320954.10

CRTAP-201, Transcript of cartilage associated protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CRTAP, Length 6,630 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTAP-201ENST00000320954 DCAF8L2P0C7V8 631 aa21.18■□□□□ 0.98
CRTAP-201ENST00000320954 EHMT2Q96KQ7 1210 aa19.66■□□□□ 0.74
CRTAP-201ENST00000320954 SUPT5HO00267 1087 aaKnown RBP19.4■□□□□ 0.7
CRTAP-201ENST00000320954 SHROOM4Q9ULL8 1493 aa19.17■□□□□ 0.66
CRTAP-201ENST00000320954 TTBK1Q5TCY1 1321 aaPredicted RBP18.84■□□□□ 0.61
CRTAP-201ENST00000320954 RANGAP1P46060 587 aaPredicted RBP18.74■□□□□ 0.59
CRTAP-201ENST00000320954 APLP2Q06481 763 aa18.59■□□□□ 0.57
CRTAP-201ENST00000320954 FAM9AQ8IZU1 332 aaPredicted RBP18.58■□□□□ 0.56
CRTAP-201ENST00000320954 ATP1B4Q9UN42 357 aaPredicted RBP18.55■□□□□ 0.56
CRTAP-201ENST00000320954 NISCHQ9Y2I1 1504 aa18.42■□□□□ 0.54
CRTAP-201ENST00000320954 MYT1LQ9UL68 1186 aa18.15■□□□□ 0.5
CRTAP-201ENST00000320954 PELP1Q8IZL8 1130 aaKnown RBP18.15■□□□□ 0.5
CRTAP-201ENST00000320954 CHIC1Q5VXU3 224 aa18.13■□□□□ 0.49
CRTAP-201ENST00000320954 PCGF6Q9BYE7 350 aa18■□□□□ 0.47
CRTAP-201ENST00000320954 MYT1Q01538 1121 aa17.99■□□□□ 0.47
CRTAP-201ENST00000320954 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.83■□□□□ 0.44
CRTAP-201ENST00000320954 HNRNPUL2Q1KMD3 747 aaKnown RBP17.83■□□□□ 0.44
CRTAP-201ENST00000320954 ERICH6Q7L0X2 663 aa17.82■□□□□ 0.44
CRTAP-201ENST00000320954 UBTFP17480 764 aaKnown RBP17.8■□□□□ 0.44
CRTAP-201ENST00000320954 PPARGC1BQ86YN6 1023 aaKnown RBP17.78■□□□□ 0.44
CRTAP-201ENST00000320954 POLR3GLQ9BT43 218 aa17.74■□□□□ 0.43
CRTAP-201ENST00000320954 CNGB1Q14028 1251 aaPredicted RBP17.74■□□□□ 0.43
CRTAP-201ENST00000320954 TRIM41Q8WV44 630 aa17.68■□□□□ 0.42
CRTAP-201ENST00000320954 SLC4A1APQ9BWU0 796 aaKnown RBP17.64■□□□□ 0.42
CRTAP-201ENST00000320954 CCER1Q8TC90 406 aaPredicted RBP17.63■□□□□ 0.41
CRTAP-201ENST00000320954 ITGAEP38570 1179 aa17.6■□□□□ 0.41
CRTAP-201ENST00000320954 YTHDC1Q96MU7 727 aaKnown RBP17.56■□□□□ 0.4
CRTAP-201ENST00000320954 NEFLP07196 543 aa17.32■□□□□ 0.36
CRTAP-201ENST00000320954 PLPPR3Q6T4P5 718 aa17.26■□□□□ 0.35
CRTAP-201ENST00000320954 CENPBP07199 599 aaPredicted RBP17.22■□□□□ 0.35
CRTAP-201ENST00000320954 SLC24A1O60721 1099 aa17.21■□□□□ 0.35
CRTAP-201ENST00000320954 PABPN1Q86U42 306 aaKnown RBP eCLIP17.18■□□□□ 0.34
CRTAP-201ENST00000320954 FBLN2P98095 1184 aa17.16■□□□□ 0.34
CRTAP-201ENST00000320954 BCL11AQ9H165 835 aa17.15■□□□□ 0.34
CRTAP-201ENST00000320954 BCANQ96GW7 911 aa17.15■□□□□ 0.34
CRTAP-201ENST00000320954 DAXXQ9UER7 740 aaPredicted RBP17.14■□□□□ 0.33
CRTAP-201ENST00000320954 ARID3CA6NKF2 412 aa16.97■□□□□ 0.31
CRTAP-201ENST00000320954 ABCC9O60706 1549 aa16.97■□□□□ 0.31
CRTAP-201ENST00000320954 CLSPNQ9HAW4 1339 aa16.94■□□□□ 0.3
CRTAP-201ENST00000320954 FAM50AQ14320 339 aaKnown RBP16.91■□□□□ 0.3
CRTAP-201ENST00000320954 TRIM52Q96A61 297 aa16.89■□□□□ 0.29
CRTAP-201ENST00000320954 ZNF326Q5BKZ1 582 aaKnown RBP16.89■□□□□ 0.29
CRTAP-201ENST00000320954 ZEB1P37275 1124 aaPredicted RBP16.88■□□□□ 0.29
CRTAP-201ENST00000320954 LOC105371045A0A1W2PR82 267 aa16.85■□□□□ 0.29
CRTAP-201ENST00000320954 NEUROD1Q13562 356 aa16.76■□□□□ 0.27
CRTAP-201ENST00000320954 A0A0G2JS52 829 aa16.7■□□□□ 0.26
CRTAP-201ENST00000320954 ZNF316A6NFI3 1004 aaPredicted RBP16.7■□□□□ 0.26
CRTAP-201ENST00000320954 PLEKHG5O94827 1062 aa16.7■□□□□ 0.26
CRTAP-201ENST00000320954 ESF1Q9H501 851 aaKnown RBP16.68■□□□□ 0.26
CRTAP-201ENST00000320954 SCAF1Q9H7N4 1312 aaKnown RBP16.67■□□□□ 0.26
CRTAP-201ENST00000320954 P3H3Q8IVL6 736 aa16.67■□□□□ 0.26
CRTAP-201ENST00000320954 SENP3Q9H4L4 574 aaPredicted RBP16.66■□□□□ 0.26
CRTAP-201ENST00000320954 ZBTB47Q9UFB7 747 aaPredicted RBP16.64■□□□□ 0.25
CRTAP-201ENST00000320954 ZNF777Q9ULD5 760 aaPredicted RBP16.6■□□□□ 0.25
CRTAP-201ENST00000320954 CHGAP10645 457 aaKnown RBP16.57■□□□□ 0.24
CRTAP-201ENST00000320954 STAG3Q9UJ98 1225 aa16.57■□□□□ 0.24
CRTAP-201ENST00000320954 TRIM26Q12899 539 aaPredicted RBP16.53■□□□□ 0.24
CRTAP-201ENST00000320954 CANXP27824 592 aaKnown RBP16.5■□□□□ 0.23
CRTAP-201ENST00000320954 NEFMP07197 916 aa16.46■□□□□ 0.22
CRTAP-201ENST00000320954 ZBTB7CA1YPR0 619 aa16.45■□□□□ 0.22
CRTAP-201ENST00000320954 HRCP23327 699 aa16.37■□□□□ 0.21
CRTAP-201ENST00000320954 NPM1P06748 294 aaKnown RBP eCLIP16.35■□□□□ 0.21
CRTAP-201ENST00000320954 RTL5Q5HYW3 569 aaPredicted RBP16.34■□□□□ 0.21
CRTAP-201ENST00000320954 C14orf37Q86TY3 774 aa16.27■□□□□ 0.2
CRTAP-201ENST00000320954 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.27■□□□□ 0.27e-8■■■■□ 25.3
CRTAP-201ENST00000320954 SALL2Q9Y467 1007 aaPredicted RBP16.18■□□□□ 0.18
CRTAP-201ENST00000320954 HAP1P54257 671 aaPredicted RBP16.17■□□□□ 0.18
CRTAP-201ENST00000320954 DIEXFQ68CQ4 756 aaKnown RBP16.17■□□□□ 0.18
CRTAP-201ENST00000320954 ARXQ96QS3 562 aa16.17■□□□□ 0.18
CRTAP-201ENST00000320954 ANP32CO43423 234 aa16.15■□□□□ 0.18
CRTAP-201ENST00000320954 TULP1O00294 542 aaPredicted RBP16.15■□□□□ 0.18
CRTAP-201ENST00000320954 ARID4BQ4LE39 1312 aaPredicted RBP16.14■□□□□ 0.17
CRTAP-201ENST00000320954 NPM2Q86SE8 214 aaKnown RBP16.1■□□□□ 0.17
CRTAP-201ENST00000320954 TRHP20396 242 aaPredicted RBP16.07■□□□□ 0.16
CRTAP-201ENST00000320954 CHIC2Q9UKJ5 165 aa16.07■□□□□ 0.16
CRTAP-201ENST00000320954 KCNH8Q96L42 1107 aa16.04■□□□□ 0.16
CRTAP-201ENST00000320954 KDM2AQ9Y2K7 1162 aa16.02■□□□□ 0.15
CRTAP-201ENST00000320954 LMOD2Q6P5Q4 547 aa15.99■□□□□ 0.15
CRTAP-201ENST00000320954 HSP90AA1P07900 732 aaKnown RBP15.99■□□□□ 0.15
CRTAP-201ENST00000320954 PPP1R15AO75807 674 aaPredicted RBP15.99■□□□□ 0.15
CRTAP-201ENST00000320954 SCRIBQ14160 1630 aa15.99■□□□□ 0.15
CRTAP-201ENST00000320954 CDK11AQ9UQ88 783 aaPredicted RBP15.98■□□□□ 0.15
CRTAP-201ENST00000320954 NPHP1O15259 732 aa15.95■□□□□ 0.14
CRTAP-201ENST00000320954 CHMP7Q8WUX9 453 aaPredicted RBP15.95■□□□□ 0.14
CRTAP-201ENST00000320954 NCBP3Q53F19 620 aaKnown RBP15.93■□□□□ 0.14
CRTAP-201ENST00000320954 TAOK2Q9UL54 1235 aa15.92■□□□□ 0.14
CRTAP-201ENST00000320954 SENP3-EIF4A1A0A087X0R7 540 aa15.9■□□□□ 0.14
CRTAP-201ENST00000320954 FAM9BQ8IZU0 186 aa15.87■□□□□ 0.13
CRTAP-201ENST00000320954 CDK11BP21127 795 aaKnown RBP15.84■□□□□ 0.13
CRTAP-201ENST00000320954 PPM1GO15355 546 aaPredicted RBP15.82■□□□□ 0.12
CRTAP-201ENST00000320954 CSRNP3Q8WYN3 585 aa15.81■□□□□ 0.12
CRTAP-201ENST00000320954 TPRNQ4KMQ1 711 aa15.8■□□□□ 0.12
CRTAP-201ENST00000320954 TMC1Q8TDI8 760 aa15.79■□□□□ 0.12
CRTAP-201ENST00000320954 MLECQ14165 292 aa15.78■□□□□ 0.12
CRTAP-201ENST00000320954 HIRIP3Q9BW71 556 aaPredicted RBP15.78■□□□□ 0.12
CRTAP-201ENST00000320954 GTF3C3Q9Y5Q9 886 aa15.75■□□□□ 0.11
CRTAP-201ENST00000320954 RGL3Q3MIN7 710 aa15.74■□□□□ 0.11
CRTAP-201ENST00000320954 WDR43Q15061 677 aaKnown RBP eCLIP15.73■□□□□ 0.11
CRTAP-201ENST00000320954 TSPY4P0CV99 314 aa15.71■□□□□ 0.11
CRTAP-201ENST00000320954 TSPY10P0CW01 314 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms