RNA–Protein interactions for RNA: ENST00000320172.10

FAM46A-201, Transcript of Putative nucleotidyltransferase FAM46A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene FAM46A, Length 5,609 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM46A-201ENST00000320172 DCAF8L2P0C7V8 631 aa28.31■■■□□ 2.12
FAM46A-201ENST00000320172 SUPT5HO00267 1087 aaKnown RBP27.15■■□□□ 1.94
FAM46A-201ENST00000320172 PELP1Q8IZL8 1130 aaKnown RBP26.91■■□□□ 1.9
FAM46A-201ENST00000320172 SHROOM4Q9ULL8 1493 aa26.45■■□□□ 1.82
FAM46A-201ENST00000320172 EHMT2Q96KQ7 1210 aa26.4■■□□□ 1.82
FAM46A-201ENST00000320172 NISCHQ9Y2I1 1504 aa26.37■■□□□ 1.81
FAM46A-201ENST00000320172 APLP2Q06481 763 aa26.18■■□□□ 1.78
FAM46A-201ENST00000320172 ERICH6Q7L0X2 663 aa25.79■■□□□ 1.72
FAM46A-201ENST00000320172 CENPBP07199 599 aaPredicted RBP25.77■■□□□ 1.72
FAM46A-201ENST00000320172 PCGF6Q9BYE7 350 aa25.75■■□□□ 1.71
FAM46A-201ENST00000320172 CCER1Q8TC90 406 aaPredicted RBP25.69■■□□□ 1.7
FAM46A-201ENST00000320172 FAM9AQ8IZU1 332 aaPredicted RBP25.66■■□□□ 1.7
FAM46A-201ENST00000320172 ZEB1P37275 1124 aaPredicted RBP25.63■■□□□ 1.69
FAM46A-201ENST00000320172 TTBK1Q5TCY1 1321 aaPredicted RBP25.6■■□□□ 1.69
FAM46A-201ENST00000320172 MYT1Q01538 1121 aa25.35■■□□□ 1.65
FAM46A-201ENST00000320172 NEFLP07196 543 aa25.21■■□□□ 1.63
FAM46A-201ENST00000320172 RANGAP1P46060 587 aaPredicted RBP25.18■■□□□ 1.62
FAM46A-201ENST00000320172 TRIM41Q8WV44 630 aa25.16■■□□□ 1.62
FAM46A-201ENST00000320172 ATP1B4Q9UN42 357 aaPredicted RBP25.03■■□□□ 1.6
FAM46A-201ENST00000320172 YTHDC1Q96MU7 727 aaKnown RBP25.03■■□□□ 1.6
FAM46A-201ENST00000320172 UBTFP17480 764 aaKnown RBP24.93■■□□□ 1.58
FAM46A-201ENST00000320172 TRIM26Q12899 539 aaPredicted RBP24.64■■□□□ 1.53
FAM46A-201ENST00000320172 DAXXQ9UER7 740 aaPredicted RBP24.57■■□□□ 1.52
FAM46A-201ENST00000320172 PPARGC1BQ86YN6 1023 aaKnown RBP24.53■■□□□ 1.52
FAM46A-201ENST00000320172 HRCP23327 699 aa24.48■■□□□ 1.51
FAM46A-201ENST00000320172 POLR3GLQ9BT43 218 aa24.26■■□□□ 1.47
FAM46A-201ENST00000320172 ITGAEP38570 1179 aa24.22■■□□□ 1.47
FAM46A-201ENST00000320172 HNRNPUL2Q1KMD3 747 aaKnown RBP24.08■■□□□ 1.45
FAM46A-201ENST00000320172 RTL5Q5HYW3 569 aaPredicted RBP24.07■■□□□ 1.44
FAM46A-201ENST00000320172 MYT1LQ9UL68 1186 aa24.06■■□□□ 1.44
FAM46A-201ENST00000320172 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.05■■□□□ 1.44
FAM46A-201ENST00000320172 LOC105371045A0A1W2PR82 267 aa24■■□□□ 1.43
FAM46A-201ENST00000320172 ZNF316A6NFI3 1004 aaPredicted RBP24■■□□□ 1.43
FAM46A-201ENST00000320172 CNGB1Q14028 1251 aaPredicted RBP23.96■■□□□ 1.43
FAM46A-201ENST00000320172 DIEXFQ68CQ4 756 aaKnown RBP23.94■■□□□ 1.42
FAM46A-201ENST00000320172 CHIC1Q5VXU3 224 aa23.91■■□□□ 1.42
FAM46A-201ENST00000320172 CLSPNQ9HAW4 1339 aa23.87■■□□□ 1.41
FAM46A-201ENST00000320172 SLC4A1APQ9BWU0 796 aaKnown RBP23.77■■□□□ 1.4
FAM46A-201ENST00000320172 FAM50AQ14320 339 aaKnown RBP23.59■■□□□ 1.37
FAM46A-201ENST00000320172 GTF3C3Q9Y5Q9 886 aa23.57■■□□□ 1.36
FAM46A-201ENST00000320172 BCANQ96GW7 911 aa23.56■■□□□ 1.36
FAM46A-201ENST00000320172 CDK11AQ9UQ88 783 aaPredicted RBP23.55■■□□□ 1.36
FAM46A-201ENST00000320172 TRIM52Q96A61 297 aa23.53■■□□□ 1.36
FAM46A-201ENST00000320172 ABCC9O60706 1549 aa23.5■■□□□ 1.35
FAM46A-201ENST00000320172 ANP32CO43423 234 aa23.5■■□□□ 1.35
FAM46A-201ENST00000320172 NEUROD1Q13562 356 aa23.48■■□□□ 1.35
FAM46A-201ENST00000320172 ZBTB47Q9UFB7 747 aaPredicted RBP23.38■■□□□ 1.33
FAM46A-201ENST00000320172 ZNF326Q5BKZ1 582 aaKnown RBP23.26■■□□□ 1.31
FAM46A-201ENST00000320172 CANXP27824 592 aaKnown RBP23.23■■□□□ 1.31
FAM46A-201ENST00000320172 PABPN1Q86U42 306 aaKnown RBP eCLIP23.22■■□□□ 1.31
FAM46A-201ENST00000320172 ACIN1Q9UKV3 1341 aaKnown RBP23.2■■□□□ 1.3
FAM46A-201ENST00000320172 ANP32AP39687 249 aaKnown RBP23.19■■□□□ 1.3
FAM46A-201ENST00000320172 NEFMP07197 916 aa23.05■■□□□ 1.28
FAM46A-201ENST00000320172 BCL11AQ9H165 835 aa23■■□□□ 1.27
FAM46A-201ENST00000320172 NPM2Q86SE8 214 aaKnown RBP22.98■■□□□ 1.27
FAM46A-201ENST00000320172 SLC24A1O60721 1099 aa22.97■■□□□ 1.27
FAM46A-201ENST00000320172 ANP32BQ92688 251 aaKnown RBP22.91■■□□□ 1.26
FAM46A-201ENST00000320172 FKBP8Q14318 412 aa22.86■■□□□ 1.25
FAM46A-201ENST00000320172 EIF5BO60841 1220 aaKnown RBP22.84■■□□□ 1.25
FAM46A-201ENST00000320172 HSP90AA1P07900 732 aaKnown RBP22.76■■□□□ 1.23
FAM46A-201ENST00000320172 FBLN2P98095 1184 aa22.76■■□□□ 1.23
FAM46A-201ENST00000320172 UPF2Q9HAU5 1272 aaKnown RBP22.76■■□□□ 1.23
FAM46A-201ENST00000320172 CSRNP3Q8WYN3 585 aa22.74■■□□□ 1.23
FAM46A-201ENST00000320172 P3H3Q8IVL6 736 aa22.73■■□□□ 1.23
FAM46A-201ENST00000320172 GLIPR1L2Q4G1C9 344 aa22.71■■□□□ 1.23
FAM46A-201ENST00000320172 TONSLQ96HA7 1378 aa22.7■■□□□ 1.22
FAM46A-201ENST00000320172 HNRNPUQ00839 825 aaKnown RBP eCLIP22.7■■□□□ 1.22
FAM46A-201ENST00000320172 ZNF777Q9ULD5 760 aaPredicted RBP22.66■■□□□ 1.22
FAM46A-201ENST00000320172 ARID3CA6NKF2 412 aa22.65■■□□□ 1.22
FAM46A-201ENST00000320172 FAM9BQ8IZU0 186 aa22.61■■□□□ 1.21
FAM46A-201ENST00000320172 DDX10Q13206 875 aaKnown RBP22.57■■□□□ 1.2
FAM46A-201ENST00000320172 CCDC136Q96JN2 1154 aa22.56■■□□□ 1.2
FAM46A-201ENST00000320172 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.54■■□□□ 1.2
FAM46A-201ENST00000320172 NBR1Q14596 966 aa22.53■■□□□ 1.2
FAM46A-201ENST00000320172 DCAF1Q9Y4B6 1507 aa22.52■■□□□ 1.2
FAM46A-201ENST00000320172 TMC1Q8TDI8 760 aa22.46■■□□□ 1.19
FAM46A-201ENST00000320172 SALL2Q9Y467 1007 aaPredicted RBP22.45■■□□□ 1.18
FAM46A-201ENST00000320172 CHGAP10645 457 aaKnown RBP22.42■■□□□ 1.18
FAM46A-201ENST00000320172 WDR43Q15061 677 aaKnown RBP eCLIP22.39■■□□□ 1.18
FAM46A-201ENST00000320172 ESF1Q9H501 851 aaKnown RBP22.38■■□□□ 1.17
FAM46A-201ENST00000320172 STAG3Q9UJ98 1225 aa22.37■■□□□ 1.17
FAM46A-201ENST00000320172 ARXQ96QS3 562 aa22.36■■□□□ 1.17
FAM46A-201ENST00000320172 MRS2Q9HD23 443 aa22.36■■□□□ 1.17
FAM46A-201ENST00000320172 SCAF1Q9H7N4 1312 aaKnown RBP22.31■■□□□ 1.16
FAM46A-201ENST00000320172 DDRGK1Q96HY6 314 aa22.28■■□□□ 1.16
FAM46A-201ENST00000320172 MIER1Q8N108 512 aa22.26■■□□□ 1.15
FAM46A-201ENST00000320172 MYH16Q9H6N6 1097 aa22.25■■□□□ 1.15
FAM46A-201ENST00000320172 IRX6P78412 446 aaPredicted RBP22.25■■□□□ 1.15
FAM46A-201ENST00000320172 CHIC2Q9UKJ5 165 aa22.24■■□□□ 1.15
FAM46A-201ENST00000320172 BECN1Q14457 450 aa22.23■■□□□ 1.15
FAM46A-201ENST00000320172 ANP32EQ9BTT0 268 aa22.19■■□□□ 1.14
FAM46A-201ENST00000320172 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.19■■□□□ 1.14
FAM46A-201ENST00000320172 KDM2AQ9Y2K7 1162 aa22.16■■□□□ 1.14
FAM46A-201ENST00000320172 TRIM44Q96DX7 344 aaPredicted RBP22.15■■□□□ 1.14
FAM46A-201ENST00000320172 NCLP19338 710 aaKnown RBP22.14■■□□□ 1.13
FAM46A-201ENST00000320172 EIF4G2P78344 907 aaKnown RBP eCLIP22.13■■□□□ 1.13
FAM46A-201ENST00000320172 GOLGA6L22H0YM25 854 aa22.1■■□□□ 1.13
FAM46A-201ENST00000320172 TSPY4P0CV99 314 aa22.1■■□□□ 1.13
FAM46A-201ENST00000320172 TSPY10P0CW01 314 aa22.1■■□□□ 1.13
FAM46A-201ENST00000320172 CDK11BP21127 795 aaKnown RBP22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms