RNA–Protein interactions for RNA: ENST00000315050.11

TNIP1-201, Transcript of TNFAIP3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNIP1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-201ENST00000315050 NISCHQ9Y2I1 1504 aa25.7■■□□□ 1.71
TNIP1-201ENST00000315050 SHROOM4Q9ULL8 1493 aa22.31■■□□□ 1.16
TNIP1-201ENST00000315050 SUPT5HO00267 1087 aaKnown RBP21.96■■□□□ 1.11
TNIP1-201ENST00000315050 ZCCHC6Q5VYS8 1495 aaKnown RBP21.76■■□□□ 1.07
TNIP1-201ENST00000315050 CCDC180Q9P1Z9 1646 aa21.63■■□□□ 1.05
TNIP1-201ENST00000315050 DCAF8L2P0C7V8 631 aa21.6■■□□□ 1.05
TNIP1-201ENST00000315050 CHIC1Q5VXU3 224 aa21.31■■□□□ 1
TNIP1-201ENST00000315050 MYO15BQ96JP2 1530 aa21.26■□□□□ 0.99
TNIP1-201ENST00000315050 DCAF1Q9Y4B6 1507 aa20.96■□□□□ 0.95
TNIP1-201ENST00000315050 HRCP23327 699 aa20.93■□□□□ 0.94
TNIP1-201ENST00000315050 PCGF6Q9BYE7 350 aa20.93■□□□□ 0.94
TNIP1-201ENST00000315050 LOC105371045A0A1W2PR82 267 aa20.79■□□□□ 0.92
TNIP1-201ENST00000315050 PPARGC1BQ86YN6 1023 aaKnown RBP20.6■□□□□ 0.89
TNIP1-201ENST00000315050 ABCC9O60706 1549 aa20.54■□□□□ 0.88
TNIP1-201ENST00000315050 SCRIBQ14160 1630 aa20.52■□□□□ 0.87
TNIP1-201ENST00000315050 RSF1Q96T23 1441 aaPredicted RBP20.46■□□□□ 0.87
TNIP1-201ENST00000315050 TRIM26Q12899 539 aaPredicted RBP20.38■□□□□ 0.85
TNIP1-201ENST00000315050 TRIM41Q8WV44 630 aa20.37■□□□□ 0.85
TNIP1-201ENST00000315050 FAM9AQ8IZU1 332 aaPredicted RBP20.33■□□□□ 0.85
TNIP1-201ENST00000315050 RB1CC1Q8TDY2 1594 aa20.28■□□□□ 0.84
TNIP1-201ENST00000315050 EHMT2Q96KQ7 1210 aa20.25■□□□□ 0.83
TNIP1-201ENST00000315050 CECR2Q9BXF3 1484 aa20.14■□□□□ 0.81
TNIP1-201ENST00000315050 MROH2BQ7Z745 1585 aa20.04■□□□□ 0.8
TNIP1-201ENST00000315050 NACADO15069 1562 aa20.03■□□□□ 0.8
TNIP1-201ENST00000315050 ZEB1P37275 1124 aaPredicted RBP19.95■□□□□ 0.78
TNIP1-201ENST00000315050 WIZO95785 1651 aa19.94■□□□□ 0.78
TNIP1-201ENST00000315050 BAZ1AQ9NRL2 1556 aaPredicted RBP19.75■□□□□ 0.75
TNIP1-201ENST00000315050 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.64■□□□□ 0.73
TNIP1-201ENST00000315050 EIF4G1Q04637 1599 aaKnown RBP19.63■□□□□ 0.73
TNIP1-201ENST00000315050 TTBK1Q5TCY1 1321 aaPredicted RBP19.62■□□□□ 0.73
TNIP1-201ENST00000315050 ABCC8Q09428 1581 aa19.62■□□□□ 0.73
TNIP1-201ENST00000315050 CCDC88BA6NC98 1476 aa19.58■□□□□ 0.72
TNIP1-201ENST00000315050 CCER1Q8TC90 406 aaPredicted RBP19.58■□□□□ 0.72
TNIP1-201ENST00000315050 TOP2AP11388 1531 aaKnown RBP19.56■□□□□ 0.72
TNIP1-201ENST00000315050 SMARCA4P51532 1647 aa19.52■□□□□ 0.72
TNIP1-201ENST00000315050 SMARCA2P51531 1590 aa19.48■□□□□ 0.71
TNIP1-201ENST00000315050 SOGA1O94964 1423 aa19.48■□□□□ 0.71
TNIP1-201ENST00000315050 CEP162Q5TB80 1403 aa19.44■□□□□ 0.7
TNIP1-201ENST00000315050 SCAF1Q9H7N4 1312 aaKnown RBP19.43■□□□□ 0.7
TNIP1-201ENST00000315050 PABPN1Q86U42 306 aaKnown RBP eCLIP19.43■□□□□ 0.7
TNIP1-201ENST00000315050 UBTFP17480 764 aaKnown RBP19.42■□□□□ 0.7
TNIP1-201ENST00000315050 CSRNP3Q8WYN3 585 aa19.38■□□□□ 0.69
TNIP1-201ENST00000315050 UNC13AQ9UPW8 1703 aa19.38■□□□□ 0.69
TNIP1-201ENST00000315050 RUSC2Q8N2Y8 1516 aa19.38■□□□□ 0.69
TNIP1-201ENST00000315050 WRNQ14191 1432 aaPredicted RBP eCLIP19.37■□□□□ 0.69
TNIP1-201ENST00000315050 TNIKQ9UKE5 1360 aa19.35■□□□□ 0.69
TNIP1-201ENST00000315050 EEA1Q15075 1411 aa19.27■□□□□ 0.68
TNIP1-201ENST00000315050 DIEXFQ68CQ4 756 aaKnown RBP19.26■□□□□ 0.67
TNIP1-201ENST00000315050 GOLGA3Q08378 1498 aa19.21■□□□□ 0.67
TNIP1-201ENST00000315050 BICRAQ9NZM4 1560 aa19.17■□□□□ 0.66
TNIP1-201ENST00000315050 NEUROD1Q13562 356 aa19.17■□□□□ 0.66
TNIP1-201ENST00000315050 ACIN1Q9UKV3 1341 aaKnown RBP19.17■□□□□ 0.66
TNIP1-201ENST00000315050 RANGAP1P46060 587 aaPredicted RBP19.12■□□□□ 0.65
TNIP1-201ENST00000315050 HNRNPUL2Q1KMD3 747 aaKnown RBP19.11■□□□□ 0.65
TNIP1-201ENST00000315050 SYNJ1O43426 1573 aa19.1■□□□□ 0.65
TNIP1-201ENST00000315050 PELP1Q8IZL8 1130 aaKnown RBP19.09■□□□□ 0.65
TNIP1-201ENST00000315050 CEP164Q9UPV0 1460 aa19.08■□□□□ 0.64
TNIP1-201ENST00000315050 PEG3Q9GZU2 1588 aa19.06■□□□□ 0.64
TNIP1-201ENST00000315050 CLIP1P30622 1438 aa19.05■□□□□ 0.64
TNIP1-201ENST00000315050 CENPBP07199 599 aaPredicted RBP19.04■□□□□ 0.64
TNIP1-201ENST00000315050 ATAD2BQ9ULI0 1458 aa19.03■□□□□ 0.64
TNIP1-201ENST00000315050 ZNF316A6NFI3 1004 aaPredicted RBP19.03■□□□□ 0.64
TNIP1-201ENST00000315050 BAZ1BQ9UIG0 1483 aaKnown RBP19.01■□□□□ 0.63
TNIP1-201ENST00000315050 GTF3C3Q9Y5Q9 886 aa19.01■□□□□ 0.63
TNIP1-201ENST00000315050 APLP2Q06481 763 aa19■□□□□ 0.63
TNIP1-201ENST00000315050 KIF21BO75037 1637 aa18.98■□□□□ 0.63
TNIP1-201ENST00000315050 RAPGEF2Q9Y4G8 1499 aa18.98■□□□□ 0.63
TNIP1-201ENST00000315050 VPS8Q8N3P4 1428 aa18.96■□□□□ 0.63
TNIP1-201ENST00000315050 YTHDC1Q96MU7 727 aaKnown RBP18.93■□□□□ 0.62
TNIP1-201ENST00000315050 MIER1Q8N108 512 aa18.83■□□□□ 0.6
TNIP1-201ENST00000315050 TOP2BQ02880 1626 aa18.79■□□□□ 0.6
TNIP1-201ENST00000315050 KANK4Q5T7N3 995 aaPredicted RBP18.72■□□□□ 0.59
TNIP1-201ENST00000315050 PRXQ9BXM0 1461 aa18.69■□□□□ 0.58
TNIP1-201ENST00000315050 ARAP1Q96P48 1450 aa18.68■□□□□ 0.58
TNIP1-201ENST00000315050 BIVM-ERCC5R4GMW8 1640 aa18.68■□□□□ 0.58
TNIP1-201ENST00000315050 ERICH3Q5RHP9 1530 aa18.65■□□□□ 0.58
TNIP1-201ENST00000315050 CUX1P39880 1505 aa18.63■□□□□ 0.57
TNIP1-201ENST00000315050 DHX57Q6P158 1386 aaKnown RBP18.63■□□□□ 0.57
TNIP1-201ENST00000315050 KIF27Q86VH2 1401 aa18.61■□□□□ 0.57
TNIP1-201ENST00000315050 ITGAEP38570 1179 aa18.59■□□□□ 0.57
TNIP1-201ENST00000315050 NCAPD3P42695 1498 aa18.58■□□□□ 0.57
TNIP1-201ENST00000315050 CLSPNQ9HAW4 1339 aa18.56■□□□□ 0.56
TNIP1-201ENST00000315050 HMGXB3Q12766 1538 aa18.55■□□□□ 0.56
TNIP1-201ENST00000315050 CFTRP13569 1480 aa18.51■□□□□ 0.55
TNIP1-201ENST00000315050 ARHGAP35Q9NRY4 1499 aa18.51■□□□□ 0.55
TNIP1-201ENST00000315050 RRBP1Q9P2E9 1410 aaKnown RBP18.5■□□□□ 0.55
TNIP1-201ENST00000315050 CCNB3Q8WWL7 1395 aa18.49■□□□□ 0.55
TNIP1-201ENST00000315050 CUX2O14529 1486 aa18.44■□□□□ 0.54
TNIP1-201ENST00000315050 IGF1RP08069 1367 aa18.41■□□□□ 0.54
TNIP1-201ENST00000315050 RAB3GAP2Q9H2M9 1393 aa18.37■□□□□ 0.53
TNIP1-201ENST00000315050 P3H3Q8IVL6 736 aa18.36■□□□□ 0.53
TNIP1-201ENST00000315050 ATP1B4Q9UN42 357 aaPredicted RBP18.36■□□□□ 0.53
TNIP1-201ENST00000315050 CARMIL1Q5VZK9 1371 aa18.35■□□□□ 0.53
TNIP1-201ENST00000315050 FAM50AQ14320 339 aaKnown RBP18.32■□□□□ 0.52
TNIP1-201ENST00000315050 CADPSQ9ULU8 1353 aa18.31■□□□□ 0.52
TNIP1-201ENST00000315050 FGD5Q6ZNL6 1462 aa18.31■□□□□ 0.52
TNIP1-201ENST00000315050 TIAM1Q13009 1591 aa18.29■□□□□ 0.52
TNIP1-201ENST00000315050 PHLDB1Q86UU1 1377 aa18.28■□□□□ 0.52
TNIP1-201ENST00000315050 LRRC9Q6ZRR7 1453 aa18.26■□□□□ 0.51
TNIP1-201ENST00000315050 SIN3AQ96ST3 1273 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 417.8 ms