RNA–Protein interactions for RNA: ENST00000313005.10

BACE1-201, Transcript of beta-secretase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BACE1, Length 6,326 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BACE1-201ENST00000313005 DCAF8L2P0C7V8 631 aa29.53■■■□□ 2.32
BACE1-201ENST00000313005 EHMT2Q96KQ7 1210 aa27.6■■■□□ 2.01
BACE1-201ENST00000313005 SUPT5HO00267 1087 aaKnown RBP27.6■■■□□ 2.01
BACE1-201ENST00000313005 SHROOM4Q9ULL8 1493 aa27.03■■□□□ 1.92
BACE1-201ENST00000313005 PELP1Q8IZL8 1130 aaKnown RBP26.69■■□□□ 1.86
BACE1-201ENST00000313005 TTBK1Q5TCY1 1321 aaPredicted RBP26.6■■□□□ 1.85
BACE1-201ENST00000313005 APLP2Q06481 763 aa26.57■■□□□ 1.84
BACE1-201ENST00000313005 FAM9AQ8IZU1 332 aaPredicted RBP26.31■■□□□ 1.8
BACE1-201ENST00000313005 RANGAP1P46060 587 aaPredicted RBP26.29■■□□□ 1.8
BACE1-201ENST00000313005 ATP1B4Q9UN42 357 aaPredicted RBP26.06■■□□□ 1.76
BACE1-201ENST00000313005 ERICH6Q7L0X2 663 aa25.99■■□□□ 1.75
BACE1-201ENST00000313005 PCGF6Q9BYE7 350 aa25.93■■□□□ 1.74
BACE1-201ENST00000313005 NISCHQ9Y2I1 1504 aa25.8■■□□□ 1.72
BACE1-201ENST00000313005 CCER1Q8TC90 406 aaPredicted RBP25.56■■□□□ 1.68
BACE1-201ENST00000313005 CENPBP07199 599 aaPredicted RBP25.42■■□□□ 1.66
BACE1-201ENST00000313005 YTHDC1Q96MU7 727 aaKnown RBP25.42■■□□□ 1.66
BACE1-201ENST00000313005 UBTFP17480 764 aaKnown RBP25.35■■□□□ 1.65
BACE1-201ENST00000313005 TRIM41Q8WV44 630 aa25.32■■□□□ 1.64
BACE1-201ENST00000313005 MYT1LQ9UL68 1186 aa25.27■■□□□ 1.64
BACE1-201ENST00000313005 NEFLP07196 543 aa25.23■■□□□ 1.63
BACE1-201ENST00000313005 PPARGC1BQ86YN6 1023 aaKnown RBP25.21■■□□□ 1.63
BACE1-201ENST00000313005 POLR3GLQ9BT43 218 aa25.13■■□□□ 1.61
BACE1-201ENST00000313005 CHIC1Q5VXU3 224 aa25.11■■□□□ 1.61
BACE1-201ENST00000313005 MYT1Q01538 1121 aa25.05■■□□□ 1.6
BACE1-201ENST00000313005 CNGB1Q14028 1251 aaPredicted RBP25.02■■□□□ 1.6
BACE1-201ENST00000313005 ZEB1P37275 1124 aaPredicted RBP25.01■■□□□ 1.59
BACE1-201ENST00000313005 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.98■■□□□ 1.59
BACE1-201ENST00000313005 HNRNPUL2Q1KMD3 747 aaKnown RBP24.98■■□□□ 1.59
BACE1-201ENST00000313005 ITGAEP38570 1179 aa24.93■■□□□ 1.58
BACE1-201ENST00000313005 DAXXQ9UER7 740 aaPredicted RBP24.83■■□□□ 1.57
BACE1-201ENST00000313005 SLC4A1APQ9BWU0 796 aaKnown RBP24.81■■□□□ 1.56
BACE1-201ENST00000313005 CLSPNQ9HAW4 1339 aa24.32■■□□□ 1.48
BACE1-201ENST00000313005 ZNF316A6NFI3 1004 aaPredicted RBP24.24■■□□□ 1.47
BACE1-201ENST00000313005 TRIM26Q12899 539 aaPredicted RBP24.22■■□□□ 1.47
BACE1-201ENST00000313005 BCL11AQ9H165 835 aa24.14■■□□□ 1.45
BACE1-201ENST00000313005 LOC105371045A0A1W2PR82 267 aa24.12■■□□□ 1.45
BACE1-201ENST00000313005 SLC24A1O60721 1099 aa24.11■■□□□ 1.45
BACE1-201ENST00000313005 HRCP23327 699 aa24.07■■□□□ 1.44
BACE1-201ENST00000313005 FAM50AQ14320 339 aaKnown RBP24.07■■□□□ 1.44
BACE1-201ENST00000313005 TRIM52Q96A61 297 aa24.04■■□□□ 1.44
BACE1-201ENST00000313005 RTL5Q5HYW3 569 aaPredicted RBP23.98■■□□□ 1.43
BACE1-201ENST00000313005 NEUROD1Q13562 356 aa23.95■■□□□ 1.42
BACE1-201ENST00000313005 ZNF326Q5BKZ1 582 aaKnown RBP23.94■■□□□ 1.42
BACE1-201ENST00000313005 BCANQ96GW7 911 aa23.89■■□□□ 1.41
BACE1-201ENST00000313005 FBLN2P98095 1184 aa23.82■■□□□ 1.4
BACE1-201ENST00000313005 ZBTB47Q9UFB7 747 aaPredicted RBP23.81■■□□□ 1.4
BACE1-201ENST00000313005 DIEXFQ68CQ4 756 aaKnown RBP23.69■■□□□ 1.38
BACE1-201ENST00000313005 PLPPR3Q6T4P5 718 aa23.67■■□□□ 1.38
BACE1-201ENST00000313005 CANXP27824 592 aaKnown RBP23.67■■□□□ 1.38
BACE1-201ENST00000313005 ARID3CA6NKF2 412 aa23.66■■□□□ 1.38
BACE1-201ENST00000313005 PABPN1Q86U42 306 aaKnown RBP eCLIP23.66■■□□□ 1.38
BACE1-201ENST00000313005 ANP32CO43423 234 aa23.48■■□□□ 1.35
BACE1-201ENST00000313005 NEFMP07197 916 aa23.46■■□□□ 1.35
BACE1-201ENST00000313005 P3H3Q8IVL6 736 aa23.42■■□□□ 1.34
BACE1-201ENST00000313005 CDK11AQ9UQ88 783 aaPredicted RBP23.4■■□□□ 1.34
BACE1-201ENST00000313005 ZNF777Q9ULD5 760 aaPredicted RBP23.38■■□□□ 1.33
BACE1-201ENST00000313005 NPM2Q86SE8 214 aaKnown RBP23.31■■□□□ 1.32
BACE1-201ENST00000313005 ESF1Q9H501 851 aaKnown RBP23.27■■□□□ 1.32
BACE1-201ENST00000313005 CHGAP10645 457 aaKnown RBP23.27■■□□□ 1.32
BACE1-201ENST00000313005 GTF3C3Q9Y5Q9 886 aa23.25■■□□□ 1.31
BACE1-201ENST00000313005 ABCC9O60706 1549 aa23.24■■□□□ 1.31
BACE1-201ENST00000313005 STAG3Q9UJ98 1225 aa23.23■■□□□ 1.31
BACE1-201ENST00000313005 SCAF1Q9H7N4 1312 aaKnown RBP23.13■■□□□ 1.29
BACE1-201ENST00000313005 A0A0G2JS52 829 aa23.11■■□□□ 1.29
BACE1-201ENST00000313005 PLEKHG5O94827 1062 aa23.08■■□□□ 1.28
BACE1-201ENST00000313005 HSP90AA1P07900 732 aaKnown RBP23.06■■□□□ 1.28
BACE1-201ENST00000313005 SALL2Q9Y467 1007 aaPredicted RBP23.05■■□□□ 1.28
BACE1-201ENST00000313005 ANP32AP39687 249 aaKnown RBP23.05■■□□□ 1.28
BACE1-201ENST00000313005 SENP3Q9H4L4 574 aaPredicted RBP23.04■■□□□ 1.28
BACE1-201ENST00000313005 ZBTB7CA1YPR0 619 aa22.95■■□□□ 1.26
BACE1-201ENST00000313005 ANP32BQ92688 251 aaKnown RBP22.92■■□□□ 1.26
BACE1-201ENST00000313005 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.91■■□□□ 1.26
BACE1-201ENST00000313005 ARXQ96QS3 562 aa22.9■■□□□ 1.26
BACE1-201ENST00000313005 EIF5BO60841 1220 aaKnown RBP22.89■■□□□ 1.26
BACE1-201ENST00000313005 FAM9BQ8IZU0 186 aa22.86■■□□□ 1.25
BACE1-201ENST00000313005 NPM1P06748 294 aaKnown RBP eCLIP22.83■■□□□ 1.24
BACE1-201ENST00000313005 FKBP8Q14318 412 aa22.8■■□□□ 1.24
BACE1-201ENST00000313005 UPF2Q9HAU5 1272 aaKnown RBP22.77■■□□□ 1.24
BACE1-201ENST00000313005 C14orf37Q86TY3 774 aa22.75■■□□□ 1.23
BACE1-201ENST00000313005 CHIC2Q9UKJ5 165 aa22.74■■□□□ 1.23
BACE1-201ENST00000313005 HNRNPUQ00839 825 aaKnown RBP eCLIP22.73■■□□□ 1.23
BACE1-201ENST00000313005 KDM2AQ9Y2K7 1162 aa22.71■■□□□ 1.23
BACE1-201ENST00000313005 TONSLQ96HA7 1378 aa22.69■■□□□ 1.22
BACE1-201ENST00000313005 NBR1Q14596 966 aa22.66■■□□□ 1.22
BACE1-201ENST00000313005 DDX10Q13206 875 aaKnown RBP22.65■■□□□ 1.22
BACE1-201ENST00000313005 TULP1O00294 542 aaPredicted RBP22.64■■□□□ 1.21
BACE1-201ENST00000313005 CDK11BP21127 795 aaKnown RBP22.63■■□□□ 1.21
BACE1-201ENST00000313005 WDR43Q15061 677 aaKnown RBP eCLIP22.62■■□□□ 1.21
BACE1-201ENST00000313005 TMC1Q8TDI8 760 aa22.59■■□□□ 1.21
BACE1-201ENST00000313005 CSRNP3Q8WYN3 585 aa22.58■■□□□ 1.2
BACE1-201ENST00000313005 ACIN1Q9UKV3 1341 aaKnown RBP22.57■■□□□ 1.2
BACE1-201ENST00000313005 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.54■■□□□ 1.2
BACE1-201ENST00000313005 IRX6P78412 446 aaPredicted RBP22.53■■□□□ 1.2
BACE1-201ENST00000313005 CCDC136Q96JN2 1154 aa22.52■■□□□ 1.2
BACE1-201ENST00000313005 HAP1P54257 671 aaPredicted RBP22.51■■□□□ 1.19
BACE1-201ENST00000313005 TPRNQ4KMQ1 711 aa22.51■■□□□ 1.19
BACE1-201ENST00000313005 MYH16Q9H6N6 1097 aa22.49■■□□□ 1.19
BACE1-201ENST00000313005 HIRIP3Q9BW71 556 aaPredicted RBP22.48■■□□□ 1.19
BACE1-201ENST00000313005 SENP3-EIF4A1A0A087X0R7 540 aa22.47■■□□□ 1.19
BACE1-201ENST00000313005 PPP1R15AO75807 674 aaPredicted RBP22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms