RNA–Protein interactions for RNA: ENST00000311637.9

ATP9A-201, Transcript of ATPase phospholipid transporting 9A (putative), humanhuman

TSL 1 (best) BASIC

Gene ATP9A, Length 7,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP9A-201ENST00000311637 DCAF8L2P0C7V8 631 aa17.81■□□□□ 0.44
ATP9A-201ENST00000311637 EHMT2Q96KQ7 1210 aa16.11■□□□□ 0.17
ATP9A-201ENST00000311637 FAM9AQ8IZU1 332 aaPredicted RBP16.08■□□□□ 0.17
ATP9A-201ENST00000311637 SUPT5HO00267 1087 aaKnown RBP15.97■□□□□ 0.15
ATP9A-201ENST00000311637 APLP2Q06481 763 aa15.72■□□□□ 0.11
ATP9A-201ENST00000311637 SHROOM4Q9ULL8 1493 aa15.66■□□□□ 0.1
ATP9A-201ENST00000311637 ATP1B4Q9UN42 357 aaPredicted RBP15.58■□□□□ 0.08
ATP9A-201ENST00000311637 RANGAP1P46060 587 aaPredicted RBP15.54■□□□□ 0.08
ATP9A-201ENST00000311637 MYT1LQ9UL68 1186 aa15.45■□□□□ 0.06
ATP9A-201ENST00000311637 TTBK1Q5TCY1 1321 aaPredicted RBP15.43■□□□□ 0.06
ATP9A-201ENST00000311637 CHIC1Q5VXU3 224 aa15.23■□□□□ 0.03
ATP9A-201ENST00000311637 PELP1Q8IZL8 1130 aaKnown RBP15.23■□□□□ 0.03
ATP9A-201ENST00000311637 NISCHQ9Y2I1 1504 aa15.11■□□□□ 0.01
ATP9A-201ENST00000311637 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.09■□□□□ 0.01
ATP9A-201ENST00000311637 HNRNPUL2Q1KMD3 747 aaKnown RBP15.09■□□□□ 0.01
ATP9A-201ENST00000311637 UBTFP17480 764 aaKnown RBP14.88□□□□□ -0.03
ATP9A-201ENST00000311637 SLC4A1APQ9BWU0 796 aaKnown RBP14.86□□□□□ -0.03
ATP9A-201ENST00000311637 ERICH6Q7L0X2 663 aa14.8□□□□□ -0.04
ATP9A-201ENST00000311637 POLR3GLQ9BT43 218 aa14.78□□□□□ -0.04
ATP9A-201ENST00000311637 PCGF6Q9BYE7 350 aa14.77□□□□□ -0.04
ATP9A-201ENST00000311637 TRIM41Q8WV44 630 aa14.7□□□□□ -0.06
ATP9A-201ENST00000311637 CCER1Q8TC90 406 aaPredicted RBP14.65□□□□□ -0.06
ATP9A-201ENST00000311637 CNGB1Q14028 1251 aaPredicted RBP14.62□□□□□ -0.07
ATP9A-201ENST00000311637 BCANQ96GW7 911 aa14.59□□□□□ -0.07
ATP9A-201ENST00000311637 PLPPR3Q6T4P5 718 aa14.58□□□□□ -0.08
ATP9A-201ENST00000311637 ITGAEP38570 1179 aa14.58□□□□□ -0.08
ATP9A-201ENST00000311637 FBLN2P98095 1184 aa14.54□□□□□ -0.08
ATP9A-201ENST00000311637 SLC24A1O60721 1099 aa14.52□□□□□ -0.09
ATP9A-201ENST00000311637 NEFLP07196 543 aa14.44□□□□□ -0.1
ATP9A-201ENST00000311637 PPARGC1BQ86YN6 1023 aaKnown RBP14.39□□□□□ -0.11
ATP9A-201ENST00000311637 DAXXQ9UER7 740 aaPredicted RBP14.36□□□□□ -0.11
ATP9A-201ENST00000311637 ESF1Q9H501 851 aaKnown RBP14.35□□□□□ -0.11
ATP9A-201ENST00000311637 MYT1Q01538 1121 aa14.33□□□□□ -0.12
ATP9A-201ENST00000311637 YTHDC1Q96MU7 727 aaKnown RBP14.29□□□□□ -0.12
ATP9A-201ENST00000311637 PABPN1Q86U42 306 aaKnown RBP eCLIP14.28□□□□□ -0.12
ATP9A-201ENST00000311637 CENPBP07199 599 aaPredicted RBP14.24□□□□□ -0.13
ATP9A-201ENST00000311637 BCL11AQ9H165 835 aa14.21□□□□□ -0.13
ATP9A-201ENST00000311637 A0A0G2JS52 829 aa14.17□□□□□ -0.14
ATP9A-201ENST00000311637 CLSPNQ9HAW4 1339 aa14.16□□□□□ -0.14
ATP9A-201ENST00000311637 TRIM52Q96A61 297 aa14.16□□□□□ -0.14
ATP9A-201ENST00000311637 SCAF1Q9H7N4 1312 aaKnown RBP14.15□□□□□ -0.14
ATP9A-201ENST00000311637 STAG3Q9UJ98 1225 aa14.13□□□□□ -0.15
ATP9A-201ENST00000311637 ZBTB47Q9UFB7 747 aaPredicted RBP14.1□□□□□ -0.15
ATP9A-201ENST00000311637 FAM50AQ14320 339 aaKnown RBP14.1□□□□□ -0.15
ATP9A-201ENST00000311637 NPM1P06748 294 aaKnown RBP eCLIP14.1□□□□□ -0.15
ATP9A-201ENST00000311637 ARID3CA6NKF2 412 aa14.08□□□□□ -0.15
ATP9A-201ENST00000311637 ZNF326Q5BKZ1 582 aaKnown RBP14.08□□□□□ -0.16
ATP9A-201ENST00000311637 ABCC9O60706 1549 aa14.06□□□□□ -0.16
ATP9A-201ENST00000311637 ZEB1P37275 1124 aaPredicted RBP14.03□□□□□ -0.16
ATP9A-201ENST00000311637 NEFMP07197 916 aa14.02□□□□□ -0.16
ATP9A-201ENST00000311637 PLEKHG5O94827 1062 aa13.98□□□□□ -0.17
ATP9A-201ENST00000311637 CHGAP10645 457 aaKnown RBP13.98□□□□□ -0.17
ATP9A-201ENST00000311637 ZNF316A6NFI3 1004 aaPredicted RBP13.94□□□□□ -0.18
ATP9A-201ENST00000311637 ZNF777Q9ULD5 760 aaPredicted RBP13.93□□□□□ -0.18
ATP9A-201ENST00000311637 ZBTB7CA1YPR0 619 aa13.86□□□□□ -0.19
ATP9A-201ENST00000311637 C14orf37Q86TY3 774 aa13.86□□□□□ -0.19
ATP9A-201ENST00000311637 SENP3Q9H4L4 574 aaPredicted RBP13.85□□□□□ -0.19
ATP9A-201ENST00000311637 NEUROD1Q13562 356 aa13.85□□□□□ -0.19
ATP9A-201ENST00000311637 CANXP27824 592 aaKnown RBP13.85□□□□□ -0.19
ATP9A-201ENST00000311637 HAP1P54257 671 aaPredicted RBP13.84□□□□□ -0.19
ATP9A-201ENST00000311637 TRHP20396 242 aaPredicted RBP13.82□□□□□ -0.2
ATP9A-201ENST00000311637 P3H3Q8IVL6 736 aa13.81□□□□□ -0.2
ATP9A-201ENST00000311637 NPM2Q86SE8 214 aaKnown RBP13.8□□□□□ -0.2
ATP9A-201ENST00000311637 ARID4BQ4LE39 1312 aaPredicted RBP13.79□□□□□ -0.2
ATP9A-201ENST00000311637 ARXQ96QS3 562 aa13.65□□□□□ -0.22
ATP9A-201ENST00000311637 CDK11AQ9UQ88 783 aaPredicted RBP13.65□□□□□ -0.22
ATP9A-201ENST00000311637 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.64□□□□□ -0.232e-7■■□□□ 13.4
ATP9A-201ENST00000311637 NPHP1O15259 732 aa13.62□□□□□ -0.23
ATP9A-201ENST00000311637 PPP1R15AO75807 674 aaPredicted RBP13.62□□□□□ -0.23
ATP9A-201ENST00000311637 AEBP2Q6ZN18 517 aaPredicted RBP13.59□□□□□ -0.23
ATP9A-201ENST00000311637 LOC105371045A0A1W2PR82 267 aa13.56□□□□□ -0.24
ATP9A-201ENST00000311637 TULP1O00294 542 aaPredicted RBP13.54□□□□□ -0.24
ATP9A-201ENST00000311637 RTL5Q5HYW3 569 aaPredicted RBP13.54□□□□□ -0.24
ATP9A-201ENST00000311637 LMOD2Q6P5Q4 547 aa13.54□□□□□ -0.24
ATP9A-201ENST00000311637 CHMP7Q8WUX9 453 aaPredicted RBP13.53□□□□□ -0.24
ATP9A-201ENST00000311637 TRIM26Q12899 539 aaPredicted RBP13.53□□□□□ -0.24
ATP9A-201ENST00000311637 KCNH8Q96L42 1107 aa13.5□□□□□ -0.25
ATP9A-201ENST00000311637 CDK11BP21127 795 aaKnown RBP13.49□□□□□ -0.25
ATP9A-201ENST00000311637 ANP32CO43423 234 aa13.44□□□□□ -0.26
ATP9A-201ENST00000311637 NCBP3Q53F19 620 aaKnown RBP13.41□□□□□ -0.26
ATP9A-201ENST00000311637 HSP90AA1P07900 732 aaKnown RBP13.38□□□□□ -0.27
ATP9A-201ENST00000311637 MLECQ14165 292 aa13.33□□□□□ -0.27
ATP9A-201ENST00000311637 TSPY4P0CV99 314 aa13.33□□□□□ -0.28
ATP9A-201ENST00000311637 TSPY10P0CW01 314 aa13.33□□□□□ -0.28
ATP9A-201ENST00000311637 KDM2AQ9Y2K7 1162 aa13.32□□□□□ -0.28
ATP9A-201ENST00000311637 CHIC2Q9UKJ5 165 aa13.31□□□□□ -0.28
ATP9A-201ENST00000311637 SALL2Q9Y467 1007 aaPredicted RBP13.31□□□□□ -0.28
ATP9A-201ENST00000311637 CCDC9Q9Y3X0 531 aaKnown RBP13.29□□□□□ -0.28
ATP9A-201ENST00000311637 ERCC6Q03468 1493 aa13.27□□□□□ -0.28
ATP9A-201ENST00000311637 TMC1Q8TDI8 760 aa13.25□□□□□ -0.29
ATP9A-201ENST00000311637 PPM1GO15355 546 aaPredicted RBP13.25□□□□□ -0.29
ATP9A-201ENST00000311637 HRCP23327 699 aa13.24□□□□□ -0.29
ATP9A-201ENST00000311637 PHF23Q9BUL5 403 aaPredicted RBP13.24□□□□□ -0.29
ATP9A-201ENST00000311637 TAOK2Q9UL54 1235 aa13.22□□□□□ -0.29
ATP9A-201ENST00000311637 GOLGA2Q08379 1002 aa13.2□□□□□ -0.3
ATP9A-201ENST00000311637 WDR43Q15061 677 aaKnown RBP eCLIP13.19□□□□□ -0.3
ATP9A-201ENST00000311637 MYH16Q9H6N6 1097 aa13.19□□□□□ -0.3
ATP9A-201ENST00000311637 ISY1Q9ULR0 285 aaKnown RBP13.18□□□□□ -0.3
ATP9A-201ENST00000311637 CLSTN1O94985 981 aa13.18□□□□□ -0.3
ATP9A-201ENST00000311637 DIEXFQ68CQ4 756 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms