RNA–Protein interactions for RNA: ENST00000310447.9

CASP2-201, Transcript of caspase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP2, Length 4,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP2-201ENST00000310447 NISCHQ9Y2I1 1504 aa29.35■■■□□ 2.29
CASP2-201ENST00000310447 DCAF8L2P0C7V8 631 aa28.48■■■□□ 2.15
CASP2-201ENST00000310447 SHROOM4Q9ULL8 1493 aa27.44■■□□□ 1.98
CASP2-201ENST00000310447 SUPT5HO00267 1087 aaKnown RBP27.43■■□□□ 1.98
CASP2-201ENST00000310447 EHMT2Q96KQ7 1210 aa26.21■■□□□ 1.79
CASP2-201ENST00000310447 FAM9AQ8IZU1 332 aaPredicted RBP25.74■■□□□ 1.71
CASP2-201ENST00000310447 PCGF6Q9BYE7 350 aa25.42■■□□□ 1.66
CASP2-201ENST00000310447 TRIM41Q8WV44 630 aa25.27■■□□□ 1.64
CASP2-201ENST00000310447 TTBK1Q5TCY1 1321 aaPredicted RBP25.22■■□□□ 1.63
CASP2-201ENST00000310447 CHIC1Q5VXU3 224 aa25.05■■□□□ 1.6
CASP2-201ENST00000310447 RANGAP1P46060 587 aaPredicted RBP24.96■■□□□ 1.59
CASP2-201ENST00000310447 LOC105371045A0A1W2PR82 267 aa24.95■■□□□ 1.59
CASP2-201ENST00000310447 ABCC9O60706 1549 aa24.82■■□□□ 1.56
CASP2-201ENST00000310447 PPARGC1BQ86YN6 1023 aaKnown RBP24.82■■□□□ 1.56
CASP2-201ENST00000310447 APLP2Q06481 763 aa24.76■■□□□ 1.55
CASP2-201ENST00000310447 UBTFP17480 764 aaKnown RBP24.68■■□□□ 1.54
CASP2-201ENST00000310447 PABPN1Q86U42 306 aaKnown RBP eCLIP24.51■■□□□ 1.51
CASP2-201ENST00000310447 CCER1Q8TC90 406 aaPredicted RBP24.43■■□□□ 1.5
CASP2-201ENST00000310447 ZCCHC6Q5VYS8 1495 aaKnown RBP24.42■■□□□ 1.5
CASP2-201ENST00000310447 TRIM26Q12899 539 aaPredicted RBP24.33■■□□□ 1.49
CASP2-201ENST00000310447 ATP1B4Q9UN42 357 aaPredicted RBP24.31■■□□□ 1.48
CASP2-201ENST00000310447 HRCP23327 699 aa24.26■■□□□ 1.47
CASP2-201ENST00000310447 ZEB1P37275 1124 aaPredicted RBP24.16■■□□□ 1.46
CASP2-201ENST00000310447 CCDC180Q9P1Z9 1646 aa24.03■■□□□ 1.44
CASP2-201ENST00000310447 SCRIBQ14160 1630 aa24.03■■□□□ 1.44
CASP2-201ENST00000310447 HNRNPUL2Q1KMD3 747 aaKnown RBP23.9■■□□□ 1.42
CASP2-201ENST00000310447 ITGAEP38570 1179 aa23.87■■□□□ 1.41
CASP2-201ENST00000310447 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.86■■□□□ 1.41
CASP2-201ENST00000310447 YTHDC1Q96MU7 727 aaKnown RBP23.73■■□□□ 1.39
CASP2-201ENST00000310447 MYO15BQ96JP2 1530 aa23.65■■□□□ 1.38
CASP2-201ENST00000310447 CENPBP07199 599 aaPredicted RBP23.61■■□□□ 1.37
CASP2-201ENST00000310447 RSF1Q96T23 1441 aaPredicted RBP23.54■■□□□ 1.36
CASP2-201ENST00000310447 CSRNP3Q8WYN3 585 aa23.52■■□□□ 1.36
CASP2-201ENST00000310447 PELP1Q8IZL8 1130 aaKnown RBP23.33■■□□□ 1.32
CASP2-201ENST00000310447 CECR2Q9BXF3 1484 aa23.29■■□□□ 1.32
CASP2-201ENST00000310447 P3H3Q8IVL6 736 aa23.26■■□□□ 1.31
CASP2-201ENST00000310447 FAM50AQ14320 339 aaKnown RBP23.25■■□□□ 1.31
CASP2-201ENST00000310447 DIEXFQ68CQ4 756 aaKnown RBP23.24■■□□□ 1.31
CASP2-201ENST00000310447 DCAF1Q9Y4B6 1507 aa23.19■■□□□ 1.3
CASP2-201ENST00000310447 RB1CC1Q8TDY2 1594 aa23.16■■□□□ 1.3
CASP2-201ENST00000310447 NACADO15069 1562 aa23.13■■□□□ 1.29
CASP2-201ENST00000310447 CNGB1Q14028 1251 aaPredicted RBP23.07■■□□□ 1.28
CASP2-201ENST00000310447 ARID3CA6NKF2 412 aa23.06■■□□□ 1.28
CASP2-201ENST00000310447 NEUROD1Q13562 356 aa23.05■■□□□ 1.28
CASP2-201ENST00000310447 POLR3GLQ9BT43 218 aa23.02■■□□□ 1.28
CASP2-201ENST00000310447 FBLN2P98095 1184 aa22.99■■□□□ 1.27
CASP2-201ENST00000310447 MROH2BQ7Z745 1585 aa22.93■■□□□ 1.26
CASP2-201ENST00000310447 TRIM52Q96A61 297 aa22.87■■□□□ 1.25
CASP2-201ENST00000310447 MYT1LQ9UL68 1186 aa22.87■■□□□ 1.25
CASP2-201ENST00000310447 NEFLP07196 543 aa22.85■■□□□ 1.25
CASP2-201ENST00000310447 ZNF316A6NFI3 1004 aaPredicted RBP22.82■■□□□ 1.24
CASP2-201ENST00000310447 BAZ1AQ9NRL2 1556 aaPredicted RBP22.8■■□□□ 1.24
CASP2-201ENST00000310447 WRNQ14191 1432 aaPredicted RBP eCLIP22.79■■□□□ 1.24
CASP2-201ENST00000310447 CEP162Q5TB80 1403 aa22.76■■□□□ 1.23
CASP2-201ENST00000310447 BAZ1BQ9UIG0 1483 aaKnown RBP22.74■■□□□ 1.23
CASP2-201ENST00000310447 CLIP1P30622 1438 aa22.73■■□□□ 1.23
CASP2-201ENST00000310447 SOGA1O94964 1423 aa22.71■■□□□ 1.23
CASP2-201ENST00000310447 GTF3C3Q9Y5Q9 886 aa22.68■■□□□ 1.22
CASP2-201ENST00000310447 CCDC88BA6NC98 1476 aa22.62■■□□□ 1.21
CASP2-201ENST00000310447 ABCC8Q09428 1581 aa22.62■■□□□ 1.21
CASP2-201ENST00000310447 ZNF326Q5BKZ1 582 aaKnown RBP22.62■■□□□ 1.21
CASP2-201ENST00000310447 WIZO95785 1651 aa22.6■■□□□ 1.21
CASP2-201ENST00000310447 GOLGA3Q08378 1498 aa22.58■■□□□ 1.21
CASP2-201ENST00000310447 ZNF777Q9ULD5 760 aaPredicted RBP22.56■■□□□ 1.2
CASP2-201ENST00000310447 TNIKQ9UKE5 1360 aa22.55■■□□□ 1.2
CASP2-201ENST00000310447 EEA1Q15075 1411 aa22.54■■□□□ 1.2
CASP2-201ENST00000310447 CHIC2Q9UKJ5 165 aa22.5■■□□□ 1.19
CASP2-201ENST00000310447 ERICH6Q7L0X2 663 aa22.47■■□□□ 1.19
CASP2-201ENST00000310447 ACIN1Q9UKV3 1341 aaKnown RBP22.47■■□□□ 1.19
CASP2-201ENST00000310447 BCANQ96GW7 911 aa22.45■■□□□ 1.18
CASP2-201ENST00000310447 CEP164Q9UPV0 1460 aa22.4■■□□□ 1.18
CASP2-201ENST00000310447 HIRIP3Q9BW71 556 aaPredicted RBP22.39■■□□□ 1.17
CASP2-201ENST00000310447 ANP32CO43423 234 aa22.38■■□□□ 1.17
CASP2-201ENST00000310447 KIF27Q86VH2 1401 aa22.38■■□□□ 1.17
CASP2-201ENST00000310447 DDX10Q13206 875 aaKnown RBP22.35■■□□□ 1.17
CASP2-201ENST00000310447 MIER1Q8N108 512 aa22.32■■□□□ 1.16
CASP2-201ENST00000310447 MTUS2Q5JR59 1369 aa22.32■■□□□ 1.16
CASP2-201ENST00000310447 CDK11AQ9UQ88 783 aaPredicted RBP22.3■■□□□ 1.16
CASP2-201ENST00000310447 SLC4A1APQ9BWU0 796 aaKnown RBP22.28■■□□□ 1.16
CASP2-201ENST00000310447 RUSC2Q8N2Y8 1516 aa22.26■■□□□ 1.15
CASP2-201ENST00000310447 TOP2AP11388 1531 aaKnown RBP22.25■■□□□ 1.15
CASP2-201ENST00000310447 TONSLQ96HA7 1378 aa22.25■■□□□ 1.15
CASP2-201ENST00000310447 RRP7BPQ9NSQ0 103 aa22.24■■□□□ 1.15
CASP2-201ENST00000310447 CHMP7Q8WUX9 453 aaPredicted RBP22.23■■□□□ 1.15
CASP2-201ENST00000310447 KANK4Q5T7N3 995 aaPredicted RBP22.21■■□□□ 1.15
CASP2-201ENST00000310447 CUX2O14529 1486 aa22.2■■□□□ 1.14
CASP2-201ENST00000310447 SCAF1Q9H7N4 1312 aaKnown RBP22.16■■□□□ 1.14
CASP2-201ENST00000310447 SMARCA4P51532 1647 aa22.16■■□□□ 1.14
CASP2-201ENST00000310447 ATAD2BQ9ULI0 1458 aa22.15■■□□□ 1.14
CASP2-201ENST00000310447 CARMIL1Q5VZK9 1371 aa22.15■■□□□ 1.14
CASP2-201ENST00000310447 SMARCA2P51531 1590 aa22.11■■□□□ 1.13
CASP2-201ENST00000310447 SIN3AQ96ST3 1273 aa22.11■■□□□ 1.13
CASP2-201ENST00000310447 VPS8Q8N3P4 1428 aa22.07■■□□□ 1.12
CASP2-201ENST00000310447 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.04■■□□□ 1.122e-6■■■■□ 25.3
CASP2-201ENST00000310447 RAPGEF2Q9Y4G8 1499 aa22.03■■□□□ 1.12
CASP2-201ENST00000310447 TDRD9Q8NDG6 1382 aaKnown RBP22.01■■□□□ 1.11
CASP2-201ENST00000310447 CCNB3Q8WWL7 1395 aa21.99■■□□□ 1.11
CASP2-201ENST00000310447 KDM2AQ9Y2K7 1162 aa21.98■■□□□ 1.11
CASP2-201ENST00000310447 HNRNPUQ00839 825 aaKnown RBP eCLIP21.96■■□□□ 1.11
CASP2-201ENST00000310447 FAM9BQ8IZU0 186 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms