RNA–Protein interactions for RNA: ENST00000303045.10

COL22A1-201, Transcript of collagen type XXII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL22A1, Length 6,346 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1-201ENST00000303045 DCAF8L2P0C7V8 631 aa24.27■■□□□ 1.48
COL22A1-201ENST00000303045 SUPT5HO00267 1087 aaKnown RBP22.76■■□□□ 1.23
COL22A1-201ENST00000303045 EHMT2Q96KQ7 1210 aa22.7■■□□□ 1.22
COL22A1-201ENST00000303045 PELP1Q8IZL8 1130 aaKnown RBP22.27■■□□□ 1.16
COL22A1-201ENST00000303045 SHROOM4Q9ULL8 1493 aa22.23■■□□□ 1.15
COL22A1-201ENST00000303045 APLP2Q06481 763 aa21.99■■□□□ 1.11
COL22A1-201ENST00000303045 TTBK1Q5TCY1 1321 aaPredicted RBP21.91■■□□□ 1.1
COL22A1-201ENST00000303045 FAM9AQ8IZU1 332 aaPredicted RBP21.69■■□□□ 1.06
COL22A1-201ENST00000303045 ERICH6Q7L0X2 663 aa21.63■■□□□ 1.05
COL22A1-201ENST00000303045 RANGAP1P46060 587 aaPredicted RBP21.62■■□□□ 1.05
COL22A1-201ENST00000303045 PCGF6Q9BYE7 350 aa21.46■■□□□ 1.03
COL22A1-201ENST00000303045 ATP1B4Q9UN42 357 aaPredicted RBP21.46■■□□□ 1.03
COL22A1-201ENST00000303045 CCER1Q8TC90 406 aaPredicted RBP21.31■■□□□ 1
COL22A1-201ENST00000303045 NISCHQ9Y2I1 1504 aa21.2■□□□□ 0.98
COL22A1-201ENST00000303045 CENPBP07199 599 aaPredicted RBP21.17■□□□□ 0.98
COL22A1-201ENST00000303045 YTHDC1Q96MU7 727 aaKnown RBP21.04■□□□□ 0.96
COL22A1-201ENST00000303045 NEFLP07196 543 aa20.98■□□□□ 0.95
COL22A1-201ENST00000303045 UBTFP17480 764 aaKnown RBP20.93■□□□□ 0.94
COL22A1-201ENST00000303045 TRIM41Q8WV44 630 aa20.91■□□□□ 0.94
COL22A1-201ENST00000303045 ZEB1P37275 1124 aaPredicted RBP20.82■□□□□ 0.92
COL22A1-201ENST00000303045 MYT1Q01538 1121 aa20.81■□□□□ 0.92
COL22A1-201ENST00000303045 MYT1LQ9UL68 1186 aa20.8■□□□□ 0.92
COL22A1-201ENST00000303045 PPARGC1BQ86YN6 1023 aaKnown RBP20.76■□□□□ 0.91
COL22A1-201ENST00000303045 POLR3GLQ9BT43 218 aa20.74■□□□□ 0.91
COL22A1-201ENST00000303045 DAXXQ9UER7 740 aaPredicted RBP20.64■□□□□ 0.89
COL22A1-201ENST00000303045 CNGB1Q14028 1251 aaPredicted RBP20.63■□□□□ 0.89
COL22A1-201ENST00000303045 CHIC1Q5VXU3 224 aa20.62■□□□□ 0.89
COL22A1-201ENST00000303045 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.58■□□□□ 0.88
COL22A1-201ENST00000303045 HNRNPUL2Q1KMD3 747 aaKnown RBP20.58■□□□□ 0.88
COL22A1-201ENST00000303045 ITGAEP38570 1179 aa20.56■□□□□ 0.88
COL22A1-201ENST00000303045 SLC4A1APQ9BWU0 796 aaKnown RBP20.45■□□□□ 0.86
COL22A1-201ENST00000303045 CLSPNQ9HAW4 1339 aa20.17■□□□□ 0.82
COL22A1-201ENST00000303045 ZNF316A6NFI3 1004 aaPredicted RBP20.14■□□□□ 0.81
COL22A1-201ENST00000303045 TRIM26Q12899 539 aaPredicted RBP20.09■□□□□ 0.81
COL22A1-201ENST00000303045 HRCP23327 699 aa19.99■□□□□ 0.79
COL22A1-201ENST00000303045 RTL5Q5HYW3 569 aaPredicted RBP19.98■□□□□ 0.79
COL22A1-201ENST00000303045 BCL11AQ9H165 835 aa19.91■□□□□ 0.78
COL22A1-201ENST00000303045 LOC105371045A0A1W2PR82 267 aa19.89■□□□□ 0.77
COL22A1-201ENST00000303045 SLC24A1O60721 1099 aa19.88■□□□□ 0.77
COL22A1-201ENST00000303045 FAM50AQ14320 339 aaKnown RBP19.85■□□□□ 0.77
COL22A1-201ENST00000303045 TRIM52Q96A61 297 aa19.84■□□□□ 0.77
COL22A1-201ENST00000303045 NEUROD1Q13562 356 aa19.76■□□□□ 0.75
COL22A1-201ENST00000303045 ZNF326Q5BKZ1 582 aaKnown RBP19.75■□□□□ 0.75
COL22A1-201ENST00000303045 BCANQ96GW7 911 aa19.75■□□□□ 0.75
COL22A1-201ENST00000303045 ZBTB47Q9UFB7 747 aaPredicted RBP19.75■□□□□ 0.75
COL22A1-201ENST00000303045 DIEXFQ68CQ4 756 aaKnown RBP19.66■□□□□ 0.74
COL22A1-201ENST00000303045 CANXP27824 592 aaKnown RBP19.6■□□□□ 0.73
COL22A1-201ENST00000303045 FBLN2P98095 1184 aa19.55■□□□□ 0.72
COL22A1-201ENST00000303045 ANP32CO43423 234 aa19.47■□□□□ 0.71
COL22A1-201ENST00000303045 CDK11AQ9UQ88 783 aaPredicted RBP19.45■□□□□ 0.7
COL22A1-201ENST00000303045 NEFMP07197 916 aa19.43■□□□□ 0.7
COL22A1-201ENST00000303045 ARID3CA6NKF2 412 aa19.42■□□□□ 0.7
COL22A1-201ENST00000303045 PLPPR3Q6T4P5 718 aa19.39■□□□□ 0.69
COL22A1-201ENST00000303045 PABPN1Q86U42 306 aaKnown RBP eCLIP19.36■□□□□ 0.69
COL22A1-201ENST00000303045 GTF3C3Q9Y5Q9 886 aa19.32■□□□□ 0.68
COL22A1-201ENST00000303045 NPM2Q86SE8 214 aaKnown RBP19.32■□□□□ 0.68
COL22A1-201ENST00000303045 P3H3Q8IVL6 736 aa19.25■□□□□ 0.67
COL22A1-201ENST00000303045 ZNF777Q9ULD5 760 aaPredicted RBP19.24■□□□□ 0.67
COL22A1-201ENST00000303045 ANP32AP39687 249 aaKnown RBP19.18■□□□□ 0.66
COL22A1-201ENST00000303045 ESF1Q9H501 851 aaKnown RBP19.18■□□□□ 0.66
COL22A1-201ENST00000303045 CHGAP10645 457 aaKnown RBP19.16■□□□□ 0.66
COL22A1-201ENST00000303045 HSP90AA1P07900 732 aaKnown RBP19.14■□□□□ 0.66
COL22A1-201ENST00000303045 STAG3Q9UJ98 1225 aa19.13■□□□□ 0.65
COL22A1-201ENST00000303045 EIF5BO60841 1220 aaKnown RBP19.08■□□□□ 0.65
COL22A1-201ENST00000303045 ANP32BQ92688 251 aaKnown RBP19.08■□□□□ 0.65
COL22A1-201ENST00000303045 SALL2Q9Y467 1007 aaPredicted RBP19.04■□□□□ 0.64
COL22A1-201ENST00000303045 SCAF1Q9H7N4 1312 aaKnown RBP19.02■□□□□ 0.64
COL22A1-201ENST00000303045 A0A0G2JS52 829 aa19.02■□□□□ 0.63
COL22A1-201ENST00000303045 ABCC9O60706 1549 aa19.01■□□□□ 0.63
COL22A1-201ENST00000303045 ARXQ96QS3 562 aa18.98■□□□□ 0.63
COL22A1-201ENST00000303045 PLEKHG5O94827 1062 aa18.94■□□□□ 0.62
COL22A1-201ENST00000303045 UPF2Q9HAU5 1272 aaKnown RBP18.93■□□□□ 0.62
COL22A1-201ENST00000303045 FAM9BQ8IZU0 186 aa18.91■□□□□ 0.62
COL22A1-201ENST00000303045 FKBP8Q14318 412 aa18.91■□□□□ 0.62
COL22A1-201ENST00000303045 SENP3Q9H4L4 574 aaPredicted RBP18.88■□□□□ 0.61
COL22A1-201ENST00000303045 ZBTB7CA1YPR0 619 aa18.87■□□□□ 0.61
COL22A1-201ENST00000303045 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.86■□□□□ 0.61
COL22A1-201ENST00000303045 HNRNPUQ00839 825 aaKnown RBP eCLIP18.84■□□□□ 0.61
COL22A1-201ENST00000303045 NBR1Q14596 966 aa18.8■□□□□ 0.6
COL22A1-201ENST00000303045 CDK11BP21127 795 aaKnown RBP18.79■□□□□ 0.6
COL22A1-201ENST00000303045 NPM1P06748 294 aaKnown RBP eCLIP18.79■□□□□ 0.6
COL22A1-201ENST00000303045 TONSLQ96HA7 1378 aa18.79■□□□□ 0.6
COL22A1-201ENST00000303045 ACIN1Q9UKV3 1341 aaKnown RBP18.78■□□□□ 0.6
COL22A1-201ENST00000303045 DDX10Q13206 875 aaKnown RBP18.74■□□□□ 0.59
COL22A1-201ENST00000303045 CHIC2Q9UKJ5 165 aa18.73■□□□□ 0.59
COL22A1-201ENST00000303045 C14orf37Q86TY3 774 aa18.73■□□□□ 0.59
COL22A1-201ENST00000303045 WDR43Q15061 677 aaKnown RBP eCLIP18.72■□□□□ 0.59
COL22A1-201ENST00000303045 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.72■□□□□ 0.59
COL22A1-201ENST00000303045 KDM2AQ9Y2K7 1162 aa18.72■□□□□ 0.59
COL22A1-201ENST00000303045 TMC1Q8TDI8 760 aa18.71■□□□□ 0.59
COL22A1-201ENST00000303045 CCDC136Q96JN2 1154 aa18.7■□□□□ 0.58
COL22A1-201ENST00000303045 TULP1O00294 542 aaPredicted RBP18.68■□□□□ 0.58
COL22A1-201ENST00000303045 CSRNP3Q8WYN3 585 aa18.65■□□□□ 0.58
COL22A1-201ENST00000303045 MYH16Q9H6N6 1097 aa18.64■□□□□ 0.57
COL22A1-201ENST00000303045 IRX6P78412 446 aaPredicted RBP18.63■□□□□ 0.57
COL22A1-201ENST00000303045 GLIPR1L2Q4G1C9 344 aa18.61■□□□□ 0.57
COL22A1-201ENST00000303045 TPRNQ4KMQ1 711 aa18.59■□□□□ 0.57
COL22A1-201ENST00000303045 MRS2Q9HD23 443 aa18.55■□□□□ 0.56
COL22A1-201ENST00000303045 HAP1P54257 671 aaPredicted RBP18.54■□□□□ 0.56
COL22A1-201ENST00000303045 HIRIP3Q9BW71 556 aaPredicted RBP18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms