RNA–Protein interactions for RNA: ENST00000302558.7

RGPD8-201, Transcript of RANBP2-like and GRIP domain containing 8, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD8, Length 5,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD8-201ENST00000302558 DCAF8L2P0C7V8 631 aa27.73■■■□□ 2.03
RGPD8-201ENST00000302558 SUPT5HO00267 1087 aaKnown RBP26.4■■□□□ 1.82
RGPD8-201ENST00000302558 SHROOM4Q9ULL8 1493 aa25.78■■□□□ 1.72
RGPD8-201ENST00000302558 EHMT2Q96KQ7 1210 aa25.75■■□□□ 1.71
RGPD8-201ENST00000302558 NISCHQ9Y2I1 1504 aa25.62■■□□□ 1.69
RGPD8-201ENST00000302558 PELP1Q8IZL8 1130 aaKnown RBP25.36■■□□□ 1.65
RGPD8-201ENST00000302558 APLP2Q06481 763 aa25.18■■□□□ 1.62
RGPD8-201ENST00000302558 FAM9AQ8IZU1 332 aaPredicted RBP24.98■■□□□ 1.59
RGPD8-201ENST00000302558 TTBK1Q5TCY1 1321 aaPredicted RBP24.9■■□□□ 1.58
RGPD8-201ENST00000302558 PCGF6Q9BYE7 350 aa24.81■■□□□ 1.56
RGPD8-201ENST00000302558 RANGAP1P46060 587 aaPredicted RBP24.56■■□□□ 1.52
RGPD8-201ENST00000302558 CENPBP07199 599 aaPredicted RBP24.45■■□□□ 1.5
RGPD8-201ENST00000302558 CCER1Q8TC90 406 aaPredicted RBP24.4■■□□□ 1.5
RGPD8-201ENST00000302558 ERICH6Q7L0X2 663 aa24.39■■□□□ 1.5
RGPD8-201ENST00000302558 TRIM41Q8WV44 630 aa24.36■■□□□ 1.49
RGPD8-201ENST00000302558 ZEB1P37275 1124 aaPredicted RBP24.34■■□□□ 1.49
RGPD8-201ENST00000302558 ATP1B4Q9UN42 357 aaPredicted RBP24.33■■□□□ 1.48
RGPD8-201ENST00000302558 UBTFP17480 764 aaKnown RBP24.16■■□□□ 1.46
RGPD8-201ENST00000302558 YTHDC1Q96MU7 727 aaKnown RBP24.02■■□□□ 1.44
RGPD8-201ENST00000302558 NEFLP07196 543 aa23.98■■□□□ 1.43
RGPD8-201ENST00000302558 PPARGC1BQ86YN6 1023 aaKnown RBP23.89■■□□□ 1.41
RGPD8-201ENST00000302558 MYT1Q01538 1121 aa23.88■■□□□ 1.41
RGPD8-201ENST00000302558 TRIM26Q12899 539 aaPredicted RBP23.6■■□□□ 1.37
RGPD8-201ENST00000302558 ITGAEP38570 1179 aa23.53■■□□□ 1.36
RGPD8-201ENST00000302558 POLR3GLQ9BT43 218 aa23.46■■□□□ 1.35
RGPD8-201ENST00000302558 HRCP23327 699 aa23.43■■□□□ 1.34
RGPD8-201ENST00000302558 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.4■■□□□ 1.34
RGPD8-201ENST00000302558 HNRNPUL2Q1KMD3 747 aaKnown RBP23.4■■□□□ 1.34
RGPD8-201ENST00000302558 MYT1LQ9UL68 1186 aa23.38■■□□□ 1.33
RGPD8-201ENST00000302558 LOC105371045A0A1W2PR82 267 aa23.35■■□□□ 1.33
RGPD8-201ENST00000302558 DAXXQ9UER7 740 aaPredicted RBP23.34■■□□□ 1.33
RGPD8-201ENST00000302558 CNGB1Q14028 1251 aaPredicted RBP23.28■■□□□ 1.32
RGPD8-201ENST00000302558 CHIC1Q5VXU3 224 aa23.17■■□□□ 1.3
RGPD8-201ENST00000302558 SLC4A1APQ9BWU0 796 aaKnown RBP22.98■■□□□ 1.27
RGPD8-201ENST00000302558 DIEXFQ68CQ4 756 aaKnown RBP22.92■■□□□ 1.26
RGPD8-201ENST00000302558 CLSPNQ9HAW4 1339 aa22.85■■□□□ 1.25
RGPD8-201ENST00000302558 FAM50AQ14320 339 aaKnown RBP22.83■■□□□ 1.25
RGPD8-201ENST00000302558 ZNF316A6NFI3 1004 aaPredicted RBP22.79■■□□□ 1.24
RGPD8-201ENST00000302558 RTL5Q5HYW3 569 aaPredicted RBP22.79■■□□□ 1.24
RGPD8-201ENST00000302558 TRIM52Q96A61 297 aa22.74■■□□□ 1.23
RGPD8-201ENST00000302558 NEUROD1Q13562 356 aa22.71■■□□□ 1.23
RGPD8-201ENST00000302558 BCANQ96GW7 911 aa22.62■■□□□ 1.21
RGPD8-201ENST00000302558 ZNF326Q5BKZ1 582 aaKnown RBP22.55■■□□□ 1.2
RGPD8-201ENST00000302558 PABPN1Q86U42 306 aaKnown RBP eCLIP22.51■■□□□ 1.19
RGPD8-201ENST00000302558 GTF3C3Q9Y5Q9 886 aa22.51■■□□□ 1.19
RGPD8-201ENST00000302558 ANP32CO43423 234 aa22.49■■□□□ 1.19
RGPD8-201ENST00000302558 CDK11AQ9UQ88 783 aaPredicted RBP22.39■■□□□ 1.17
RGPD8-201ENST00000302558 ZBTB47Q9UFB7 747 aaPredicted RBP22.34■■□□□ 1.17
RGPD8-201ENST00000302558 FBLN2P98095 1184 aa22.31■■□□□ 1.16
RGPD8-201ENST00000302558 ABCC9O60706 1549 aa22.29■■□□□ 1.16
RGPD8-201ENST00000302558 BCL11AQ9H165 835 aa22.28■■□□□ 1.16
RGPD8-201ENST00000302558 CANXP27824 592 aaKnown RBP22.25■■□□□ 1.15
RGPD8-201ENST00000302558 SLC24A1O60721 1099 aa22.22■■□□□ 1.15
RGPD8-201ENST00000302558 P3H3Q8IVL6 736 aa22.21■■□□□ 1.15
RGPD8-201ENST00000302558 ARID3CA6NKF2 412 aa22.2■■□□□ 1.14
RGPD8-201ENST00000302558 NEFMP07197 916 aa22.11■■□□□ 1.13
RGPD8-201ENST00000302558 ACIN1Q9UKV3 1341 aaKnown RBP22.09■■□□□ 1.13
RGPD8-201ENST00000302558 CSRNP3Q8WYN3 585 aa22.07■■□□□ 1.12
RGPD8-201ENST00000302558 ZNF777Q9ULD5 760 aaPredicted RBP22.06■■□□□ 1.12
RGPD8-201ENST00000302558 ANP32AP39687 249 aaKnown RBP22.03■■□□□ 1.12
RGPD8-201ENST00000302558 NPM2Q86SE8 214 aaKnown RBP22■■□□□ 1.11
RGPD8-201ENST00000302558 FKBP8Q14318 412 aa21.89■■□□□ 1.09
RGPD8-201ENST00000302558 TONSLQ96HA7 1378 aa21.83■■□□□ 1.09
RGPD8-201ENST00000302558 HNRNPUQ00839 825 aaKnown RBP eCLIP21.82■■□□□ 1.08
RGPD8-201ENST00000302558 CHGAP10645 457 aaKnown RBP21.8■■□□□ 1.08
RGPD8-201ENST00000302558 DDX10Q13206 875 aaKnown RBP21.79■■□□□ 1.08
RGPD8-201ENST00000302558 FAM9BQ8IZU0 186 aa21.79■■□□□ 1.08
RGPD8-201ENST00000302558 SALL2Q9Y467 1007 aaPredicted RBP21.75■■□□□ 1.07
RGPD8-201ENST00000302558 HSP90AA1P07900 732 aaKnown RBP21.75■■□□□ 1.07
RGPD8-201ENST00000302558 ESF1Q9H501 851 aaKnown RBP21.73■■□□□ 1.07
RGPD8-201ENST00000302558 STAG3Q9UJ98 1225 aa21.7■■□□□ 1.06
RGPD8-201ENST00000302558 ANP32BQ92688 251 aaKnown RBP21.69■■□□□ 1.06
RGPD8-201ENST00000302558 UPF2Q9HAU5 1272 aaKnown RBP21.68■■□□□ 1.06
RGPD8-201ENST00000302558 EIF5BO60841 1220 aaKnown RBP21.66■■□□□ 1.06
RGPD8-201ENST00000302558 CHIC2Q9UKJ5 165 aa21.65■■□□□ 1.06
RGPD8-201ENST00000302558 PLPPR3Q6T4P5 718 aa21.62■■□□□ 1.05
RGPD8-201ENST00000302558 TMC1Q8TDI8 760 aa21.62■■□□□ 1.05
RGPD8-201ENST00000302558 CCDC136Q96JN2 1154 aa21.6■■□□□ 1.05
RGPD8-201ENST00000302558 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.59■■□□□ 1.05
RGPD8-201ENST00000302558 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.53■■□□□ 1.04
RGPD8-201ENST00000302558 MRS2Q9HD23 443 aa21.52■■□□□ 1.04
RGPD8-201ENST00000302558 KDM2AQ9Y2K7 1162 aa21.51■■□□□ 1.03
RGPD8-201ENST00000302558 NPM1P06748 294 aaKnown RBP eCLIP21.51■■□□□ 1.03
RGPD8-201ENST00000302558 NBR1Q14596 966 aa21.51■■□□□ 1.03
RGPD8-201ENST00000302558 WDR43Q15061 677 aaKnown RBP eCLIP21.5■■□□□ 1.03
RGPD8-201ENST00000302558 DCAF1Q9Y4B6 1507 aa21.48■■□□□ 1.03
RGPD8-201ENST00000302558 SCRIBQ14160 1630 aa21.47■■□□□ 1.03
RGPD8-201ENST00000302558 HIRIP3Q9BW71 556 aaPredicted RBP21.45■■□□□ 1.02
RGPD8-201ENST00000302558 ARXQ96QS3 562 aa21.45■■□□□ 1.02
RGPD8-201ENST00000302558 IRX6P78412 446 aaPredicted RBP21.45■■□□□ 1.02
RGPD8-201ENST00000302558 TSPY4P0CV99 314 aa21.44■■□□□ 1.02
RGPD8-201ENST00000302558 TSPY10P0CW01 314 aa21.44■■□□□ 1.02
RGPD8-201ENST00000302558 MIER1Q8N108 512 aa21.42■■□□□ 1.02
RGPD8-201ENST00000302558 MTUS2Q5JR59 1369 aa21.37■■□□□ 1.01
RGPD8-201ENST00000302558 GLIPR1L2Q4G1C9 344 aa21.34■■□□□ 1.01
RGPD8-201ENST00000302558 EIF4G2P78344 907 aaKnown RBP eCLIP21.3■■□□□ 1
RGPD8-201ENST00000302558 RRP7BPQ9NSQ0 103 aa21.29■■□□□ 1
RGPD8-201ENST00000302558 SCAF1Q9H7N4 1312 aaKnown RBP21.28■■□□□ 1
RGPD8-201ENST00000302558 MYH16Q9H6N6 1097 aa21.27■■□□□ 1
RGPD8-201ENST00000302558 SENP3Q9H4L4 574 aaPredicted RBP21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms