RNA–Protein interactions for RNA: ENST00000299300.10

CCT2-201, Transcript of chaperonin containing TCP1 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT2, Length 2,041 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT2-201ENST00000299300 NISCHQ9Y2I1 1504 aa29.38■■■□□ 2.29
CCT2-201ENST00000299300 CCDC180Q9P1Z9 1646 aa25.15■■□□□ 1.62
CCT2-201ENST00000299300 ZCCHC6Q5VYS8 1495 aaKnown RBP24.88■■□□□ 1.57
CCT2-201ENST00000299300 SHROOM4Q9ULL8 1493 aa24.64■■□□□ 1.53
CCT2-201ENST00000299300 DCAF1Q9Y4B6 1507 aa24.28■■□□□ 1.48
CCT2-201ENST00000299300 SUPT5HO00267 1087 aaKnown RBP24.15■■□□□ 1.46
CCT2-201ENST00000299300 DCAF8L2P0C7V8 631 aa23.87■■□□□ 1.41
CCT2-201ENST00000299300 CHIC1Q5VXU3 224 aa23.68■■□□□ 1.38
CCT2-201ENST00000299300 MYO15BQ96JP2 1530 aa23.61■■□□□ 1.37
CCT2-201ENST00000299300 ABCC9O60706 1549 aa23.48■■□□□ 1.35
CCT2-201ENST00000299300 SCRIBQ14160 1630 aa23.29■■□□□ 1.32
CCT2-201ENST00000299300 RSF1Q96T23 1441 aaPredicted RBP23.18■■□□□ 1.3
CCT2-201ENST00000299300 NACADO15069 1562 aa23.18■■□□□ 1.3
CCT2-201ENST00000299300 RB1CC1Q8TDY2 1594 aa23■■□□□ 1.27
CCT2-201ENST00000299300 HRCP23327 699 aa22.91■■□□□ 1.26
CCT2-201ENST00000299300 LOC105371045A0A1W2PR82 267 aa22.82■■□□□ 1.24
CCT2-201ENST00000299300 CECR2Q9BXF3 1484 aa22.8■■□□□ 1.24
CCT2-201ENST00000299300 MROH2BQ7Z745 1585 aa22.77■■□□□ 1.24
CCT2-201ENST00000299300 PCGF6Q9BYE7 350 aa22.74■■□□□ 1.23
CCT2-201ENST00000299300 WIZO95785 1651 aa22.65■■□□□ 1.22
CCT2-201ENST00000299300 BAZ1AQ9NRL2 1556 aaPredicted RBP22.62■■□□□ 1.21
CCT2-201ENST00000299300 TRIM41Q8WV44 630 aa22.6■■□□□ 1.21
CCT2-201ENST00000299300 EIF4G1Q04637 1599 aaKnown RBP22.51■■□□□ 1.19
CCT2-201ENST00000299300 TRIM26Q12899 539 aaPredicted RBP22.48■■□□□ 1.19
CCT2-201ENST00000299300 UNC13AQ9UPW8 1703 aa22.46■■□□□ 1.19
CCT2-201ENST00000299300 SMARCA4P51532 1647 aa22.39■■□□□ 1.18
CCT2-201ENST00000299300 TOP2AP11388 1531 aaKnown RBP22.39■■□□□ 1.17
CCT2-201ENST00000299300 FAM9AQ8IZU1 332 aaPredicted RBP22.25■■□□□ 1.15
CCT2-201ENST00000299300 SMARCA2P51531 1590 aa22.24■■□□□ 1.15
CCT2-201ENST00000299300 PPARGC1BQ86YN6 1023 aaKnown RBP22.24■■□□□ 1.15
CCT2-201ENST00000299300 CCDC88BA6NC98 1476 aa22.2■■□□□ 1.14
CCT2-201ENST00000299300 BICRAQ9NZM4 1560 aa22.16■■□□□ 1.14
CCT2-201ENST00000299300 PEG3Q9GZU2 1588 aa22.08■■□□□ 1.13
CCT2-201ENST00000299300 ABCC8Q09428 1581 aa22.05■■□□□ 1.12
CCT2-201ENST00000299300 ZEB1P37275 1124 aaPredicted RBP22.04■■□□□ 1.12
CCT2-201ENST00000299300 EEA1Q15075 1411 aa21.91■■□□□ 1.1
CCT2-201ENST00000299300 EHMT2Q96KQ7 1210 aa21.9■■□□□ 1.1
CCT2-201ENST00000299300 WRNQ14191 1432 aaPredicted RBP eCLIP21.89■■□□□ 1.09
CCT2-201ENST00000299300 PABPN1Q86U42 306 aaKnown RBP eCLIP21.84■■□□□ 1.09
CCT2-201ENST00000299300 SOGA1O94964 1423 aa21.83■■□□□ 1.09
CCT2-201ENST00000299300 TNIKQ9UKE5 1360 aa21.81■■□□□ 1.08
CCT2-201ENST00000299300 ATAD2BQ9ULI0 1458 aa21.78■■□□□ 1.08
CCT2-201ENST00000299300 CEP162Q5TB80 1403 aa21.76■■□□□ 1.07
CCT2-201ENST00000299300 RUSC2Q8N2Y8 1516 aa21.74■■□□□ 1.07
CCT2-201ENST00000299300 CSRNP3Q8WYN3 585 aa21.72■■□□□ 1.07
CCT2-201ENST00000299300 SYNJ1O43426 1573 aa21.68■■□□□ 1.06
CCT2-201ENST00000299300 GOLGA3Q08378 1498 aa21.67■■□□□ 1.06
CCT2-201ENST00000299300 BAZ1BQ9UIG0 1483 aaKnown RBP21.66■■□□□ 1.06
CCT2-201ENST00000299300 KIF21BO75037 1637 aa21.63■■□□□ 1.05
CCT2-201ENST00000299300 CEP164Q9UPV0 1460 aa21.56■■□□□ 1.04
CCT2-201ENST00000299300 TOP2BQ02880 1626 aa21.49■■□□□ 1.03
CCT2-201ENST00000299300 UBTFP17480 764 aaKnown RBP21.48■■□□□ 1.03
CCT2-201ENST00000299300 BIVM-ERCC5R4GMW8 1640 aa21.47■■□□□ 1.03
CCT2-201ENST00000299300 HMGXB3Q12766 1538 aa21.46■■□□□ 1.03
CCT2-201ENST00000299300 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.44■■□□□ 1.02
CCT2-201ENST00000299300 NCAPD3P42695 1498 aa21.42■■□□□ 1.02
CCT2-201ENST00000299300 CCER1Q8TC90 406 aaPredicted RBP21.4■■□□□ 1.02
CCT2-201ENST00000299300 CLIP1P30622 1438 aa21.35■■□□□ 1.01
CCT2-201ENST00000299300 RAPGEF2Q9Y4G8 1499 aa21.34■■□□□ 1.01
CCT2-201ENST00000299300 VPS8Q8N3P4 1428 aa21.32■■□□□ 1
CCT2-201ENST00000299300 ERICH3Q5RHP9 1530 aa21.29■■□□□ 1
CCT2-201ENST00000299300 PRXQ9BXM0 1461 aa21.25■□□□□ 0.99
CCT2-201ENST00000299300 TTBK1Q5TCY1 1321 aaPredicted RBP21.23■□□□□ 0.99
CCT2-201ENST00000299300 CUX1P39880 1505 aa21.22■□□□□ 0.99
CCT2-201ENST00000299300 CFTRP13569 1480 aa21.21■□□□□ 0.99
CCT2-201ENST00000299300 PRDM2Q13029 1718 aa21.19■□□□□ 0.98
CCT2-201ENST00000299300 ARAP1Q96P48 1450 aa21.09■□□□□ 0.97
CCT2-201ENST00000299300 KIF27Q86VH2 1401 aa21.08■□□□□ 0.97
CCT2-201ENST00000299300 DIEXFQ68CQ4 756 aaKnown RBP21.02■□□□□ 0.96
CCT2-201ENST00000299300 APLP2Q06481 763 aa21.01■□□□□ 0.95
CCT2-201ENST00000299300 SCAF1Q9H7N4 1312 aaKnown RBP21.01■□□□□ 0.95
CCT2-201ENST00000299300 HNRNPUL2Q1KMD3 747 aaKnown RBP20.95■□□□□ 0.94
CCT2-201ENST00000299300 ZNF316A6NFI3 1004 aaPredicted RBP20.94■□□□□ 0.94
CCT2-201ENST00000299300 CADPSQ9ULU8 1353 aa20.91■□□□□ 0.94
CCT2-201ENST00000299300 ARHGAP35Q9NRY4 1499 aa20.9■□□□□ 0.94
CCT2-201ENST00000299300 RRBP1Q9P2E9 1410 aaKnown RBP20.87■□□□□ 0.93
CCT2-201ENST00000299300 ACIN1Q9UKV3 1341 aaKnown RBP20.87■□□□□ 0.93
CCT2-201ENST00000299300 IGF1RP08069 1367 aa20.85■□□□□ 0.93
CCT2-201ENST00000299300 RANGAP1P46060 587 aaPredicted RBP20.85■□□□□ 0.93
CCT2-201ENST00000299300 CLSPNQ9HAW4 1339 aa20.84■□□□□ 0.93
CCT2-201ENST00000299300 CUX2O14529 1486 aa20.84■□□□□ 0.93
CCT2-201ENST00000299300 KANK4Q5T7N3 995 aaPredicted RBP20.82■□□□□ 0.92
CCT2-201ENST00000299300 FGD5Q6ZNL6 1462 aa20.81■□□□□ 0.92
CCT2-201ENST00000299300 MAP3K1Q13233 1512 aa20.8■□□□□ 0.92
CCT2-201ENST00000299300 CC2D2AQ9P2K1 1620 aa20.8■□□□□ 0.92
CCT2-201ENST00000299300 NEUROD1Q13562 356 aa20.79■□□□□ 0.92
CCT2-201ENST00000299300 DHX57Q6P158 1386 aaKnown RBP20.77■□□□□ 0.92
CCT2-201ENST00000299300 CARMIL1Q5VZK9 1371 aa20.73■□□□□ 0.91
CCT2-201ENST00000299300 CENPBP07199 599 aaPredicted RBP20.73■□□□□ 0.91
CCT2-201ENST00000299300 TIAM1Q13009 1591 aa20.71■□□□□ 0.91
CCT2-201ENST00000299300 FANCD2Q9BXW9 1451 aa20.7■□□□□ 0.9
CCT2-201ENST00000299300 DNMBPQ6XZF7 1577 aa20.69■□□□□ 0.9
CCT2-201ENST00000299300 CCNB3Q8WWL7 1395 aa20.69■□□□□ 0.9
CCT2-201ENST00000299300 ABCA10Q8WWZ4 1543 aa20.65■□□□□ 0.9
CCT2-201ENST00000299300 PELP1Q8IZL8 1130 aaKnown RBP20.64■□□□□ 0.89
CCT2-201ENST00000299300 CFAP43Q8NDM7 1665 aa20.63■□□□□ 0.89
CCT2-201ENST00000299300 TOPBP1Q92547 1522 aa20.6■□□□□ 0.89
CCT2-201ENST00000299300 LRRC9Q6ZRR7 1453 aa20.59■□□□□ 0.89
CCT2-201ENST00000299300 CUL7Q14999 1698 aa20.58■□□□□ 0.89
CCT2-201ENST00000299300 FHAD1B1AJZ9 1412 aa20.58■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms