RNA–Protein interactions for RNA: ENST00000296805.7

GFM2-201, Transcript of G elongation factor mitochondrial 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GFM2, Length 3,249 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFM2-201ENST00000296805 NISCHQ9Y2I1 1504 aa22.34■■□□□ 1.17
GFM2-201ENST00000296805 CCDC180Q9P1Z9 1646 aa19.11■□□□□ 0.65
GFM2-201ENST00000296805 ZCCHC6Q5VYS8 1495 aaKnown RBP18.96■□□□□ 0.63
GFM2-201ENST00000296805 SHROOM4Q9ULL8 1493 aa18.69■□□□□ 0.58
GFM2-201ENST00000296805 DCAF1Q9Y4B6 1507 aa18.51■□□□□ 0.55
GFM2-201ENST00000296805 SUPT5HO00267 1087 aaKnown RBP18.36■□□□□ 0.53
GFM2-201ENST00000296805 CHIC1Q5VXU3 224 aa18.12■□□□□ 0.49
GFM2-201ENST00000296805 MYO15BQ96JP2 1530 aa18.1■□□□□ 0.49
GFM2-201ENST00000296805 DCAF8L2P0C7V8 631 aa17.96■□□□□ 0.47
GFM2-201ENST00000296805 ABCC9O60706 1549 aa17.92■□□□□ 0.46
GFM2-201ENST00000296805 HRCP23327 699 aa17.72■□□□□ 0.43
GFM2-201ENST00000296805 RSF1Q96T23 1441 aaPredicted RBP17.65■□□□□ 0.42
GFM2-201ENST00000296805 SCRIBQ14160 1630 aa17.64■□□□□ 0.41
GFM2-201ENST00000296805 NACADO15069 1562 aa17.56■□□□□ 0.4
GFM2-201ENST00000296805 RB1CC1Q8TDY2 1594 aa17.55■□□□□ 0.4
GFM2-201ENST00000296805 PCGF6Q9BYE7 350 aa17.47■□□□□ 0.39
GFM2-201ENST00000296805 LOC105371045A0A1W2PR82 267 aa17.43■□□□□ 0.38
GFM2-201ENST00000296805 MROH2BQ7Z745 1585 aa17.3■□□□□ 0.36
GFM2-201ENST00000296805 TRIM26Q12899 539 aaPredicted RBP17.3■□□□□ 0.36
GFM2-201ENST00000296805 CECR2Q9BXF3 1484 aa17.29■□□□□ 0.36
GFM2-201ENST00000296805 BAZ1AQ9NRL2 1556 aaPredicted RBP17.23■□□□□ 0.35
GFM2-201ENST00000296805 TRIM41Q8WV44 630 aa17.22■□□□□ 0.35
GFM2-201ENST00000296805 EIF4G1Q04637 1599 aaKnown RBP17.21■□□□□ 0.35
GFM2-201ENST00000296805 WIZO95785 1651 aa17.2■□□□□ 0.34
GFM2-201ENST00000296805 PPARGC1BQ86YN6 1023 aaKnown RBP17.13■□□□□ 0.33
GFM2-201ENST00000296805 TOP2AP11388 1531 aaKnown RBP17.04■□□□□ 0.32
GFM2-201ENST00000296805 ZEB1P37275 1124 aaPredicted RBP17.02■□□□□ 0.32
GFM2-201ENST00000296805 SMARCA4P51532 1647 aa17■□□□□ 0.31
GFM2-201ENST00000296805 UNC13AQ9UPW8 1703 aa16.98■□□□□ 0.31
GFM2-201ENST00000296805 SMARCA2P51531 1590 aa16.92■□□□□ 0.3
GFM2-201ENST00000296805 FAM9AQ8IZU1 332 aaPredicted RBP16.89■□□□□ 0.29
GFM2-201ENST00000296805 CCDC88BA6NC98 1476 aa16.88■□□□□ 0.29
GFM2-201ENST00000296805 WRNQ14191 1432 aaPredicted RBP eCLIP16.81■□□□□ 0.28
GFM2-201ENST00000296805 PEG3Q9GZU2 1588 aa16.81■□□□□ 0.28
GFM2-201ENST00000296805 ABCC8Q09428 1581 aa16.78■□□□□ 0.28
GFM2-201ENST00000296805 BICRAQ9NZM4 1560 aa16.75■□□□□ 0.27
GFM2-201ENST00000296805 EEA1Q15075 1411 aa16.75■□□□□ 0.27
GFM2-201ENST00000296805 TNIKQ9UKE5 1360 aa16.68■□□□□ 0.26
GFM2-201ENST00000296805 CEP162Q5TB80 1403 aa16.64■□□□□ 0.25
GFM2-201ENST00000296805 SOGA1O94964 1423 aa16.63■□□□□ 0.25
GFM2-201ENST00000296805 EHMT2Q96KQ7 1210 aa16.59■□□□□ 0.25
GFM2-201ENST00000296805 GOLGA3Q08378 1498 aa16.55■□□□□ 0.24
GFM2-201ENST00000296805 KIF21BO75037 1637 aa16.54■□□□□ 0.24
GFM2-201ENST00000296805 CSRNP3Q8WYN3 585 aa16.54■□□□□ 0.24
GFM2-201ENST00000296805 RUSC2Q8N2Y8 1516 aa16.54■□□□□ 0.24
GFM2-201ENST00000296805 SYNJ1O43426 1573 aa16.5■□□□□ 0.23
GFM2-201ENST00000296805 ATAD2BQ9ULI0 1458 aa16.5■□□□□ 0.23
GFM2-201ENST00000296805 CEP164Q9UPV0 1460 aa16.46■□□□□ 0.23
GFM2-201ENST00000296805 BAZ1BQ9UIG0 1483 aaKnown RBP16.43■□□□□ 0.22
GFM2-201ENST00000296805 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.42■□□□□ 0.22
GFM2-201ENST00000296805 CCER1Q8TC90 406 aaPredicted RBP16.4■□□□□ 0.22
GFM2-201ENST00000296805 PABPN1Q86U42 306 aaKnown RBP eCLIP16.39■□□□□ 0.21
GFM2-201ENST00000296805 TOP2BQ02880 1626 aa16.37■□□□□ 0.21
GFM2-201ENST00000296805 BIVM-ERCC5R4GMW8 1640 aa16.36■□□□□ 0.21
GFM2-201ENST00000296805 UBTFP17480 764 aaKnown RBP16.32■□□□□ 0.2
GFM2-201ENST00000296805 SCAF1Q9H7N4 1312 aaKnown RBP16.31■□□□□ 0.2
GFM2-201ENST00000296805 VPS8Q8N3P4 1428 aa16.3■□□□□ 0.2
GFM2-201ENST00000296805 CLIP1P30622 1438 aa16.29■□□□□ 0.2
GFM2-201ENST00000296805 HMGXB3Q12766 1538 aa16.28■□□□□ 0.2
GFM2-201ENST00000296805 ERICH3Q5RHP9 1530 aa16.27■□□□□ 0.19
GFM2-201ENST00000296805 RAPGEF2Q9Y4G8 1499 aa16.25■□□□□ 0.19
GFM2-201ENST00000296805 NCAPD3P42695 1498 aa16.22■□□□□ 0.19
GFM2-201ENST00000296805 PELP1Q8IZL8 1130 aaKnown RBP16.21■□□□□ 0.19
GFM2-201ENST00000296805 PRXQ9BXM0 1461 aa16.21■□□□□ 0.19
GFM2-201ENST00000296805 DIEXFQ68CQ4 756 aaKnown RBP16.19■□□□□ 0.18
GFM2-201ENST00000296805 ACIN1Q9UKV3 1341 aaKnown RBP16.18■□□□□ 0.18
GFM2-201ENST00000296805 CUX1P39880 1505 aa16.12■□□□□ 0.17
GFM2-201ENST00000296805 TTBK1Q5TCY1 1321 aaPredicted RBP16.12■□□□□ 0.17
GFM2-201ENST00000296805 ZNF316A6NFI3 1004 aaPredicted RBP16.12■□□□□ 0.17
GFM2-201ENST00000296805 PRDM2Q13029 1718 aa16.1■□□□□ 0.17
GFM2-201ENST00000296805 ARAP1Q96P48 1450 aa16.1■□□□□ 0.17
GFM2-201ENST00000296805 CFTRP13569 1480 aa16.1■□□□□ 0.17
GFM2-201ENST00000296805 NEUROD1Q13562 356 aa16.08■□□□□ 0.16
GFM2-201ENST00000296805 CLSPNQ9HAW4 1339 aa16.04■□□□□ 0.16
GFM2-201ENST00000296805 CENPBP07199 599 aaPredicted RBP16.04■□□□□ 0.16
GFM2-201ENST00000296805 KIF27Q86VH2 1401 aa16.03■□□□□ 0.16
GFM2-201ENST00000296805 CUX2O14529 1486 aa16■□□□□ 0.15
GFM2-201ENST00000296805 RRBP1Q9P2E9 1410 aaKnown RBP16■□□□□ 0.15
GFM2-201ENST00000296805 APLP2Q06481 763 aa16■□□□□ 0.15
GFM2-201ENST00000296805 HNRNPUL2Q1KMD3 747 aaKnown RBP15.97■□□□□ 0.15
GFM2-201ENST00000296805 MAP3K1Q13233 1512 aa15.94■□□□□ 0.14
GFM2-201ENST00000296805 ARHGAP35Q9NRY4 1499 aa15.93■□□□□ 0.14
GFM2-201ENST00000296805 DHX57Q6P158 1386 aaKnown RBP15.92■□□□□ 0.14
GFM2-201ENST00000296805 GTF3C3Q9Y5Q9 886 aa15.89■□□□□ 0.13
GFM2-201ENST00000296805 KANK4Q5T7N3 995 aaPredicted RBP15.86■□□□□ 0.13
GFM2-201ENST00000296805 IGF1RP08069 1367 aa15.84■□□□□ 0.13
GFM2-201ENST00000296805 CADPSQ9ULU8 1353 aa15.83■□□□□ 0.12
GFM2-201ENST00000296805 MIER1Q8N108 512 aa15.82■□□□□ 0.12
GFM2-201ENST00000296805 TIAM1Q13009 1591 aa15.82■□□□□ 0.12
GFM2-201ENST00000296805 CCNB3Q8WWL7 1395 aa15.81■□□□□ 0.12
GFM2-201ENST00000296805 FGD5Q6ZNL6 1462 aa15.77■□□□□ 0.12
GFM2-201ENST00000296805 CFAP43Q8NDM7 1665 aa15.77■□□□□ 0.11
GFM2-201ENST00000296805 RANGAP1P46060 587 aaPredicted RBP15.76■□□□□ 0.11
GFM2-201ENST00000296805 CARMIL1Q5VZK9 1371 aa15.74■□□□□ 0.11
GFM2-201ENST00000296805 LRRC9Q6ZRR7 1453 aa15.72■□□□□ 0.11
GFM2-201ENST00000296805 MAPKBP1O60336 1514 aa15.7■□□□□ 0.1
GFM2-201ENST00000296805 DNMBPQ6XZF7 1577 aa15.7■□□□□ 0.1
GFM2-201ENST00000296805 FHAD1B1AJZ9 1412 aa15.7■□□□□ 0.1
GFM2-201ENST00000296805 CC2D2AQ9P2K1 1620 aa15.69■□□□□ 0.1
GFM2-201ENST00000296805 ABCA10Q8WWZ4 1543 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms