RNA–Protein interactions for RNA: ENST00000285238.12

ABCC3-201, Transcript of ATP binding cassette subfamily C member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCC3, Length 5,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC3-201ENST00000285238 DCAF8L2P0C7V8 631 aa21.91■■□□□ 1.1
ABCC3-201ENST00000285238 NISCHQ9Y2I1 1504 aa20.95■□□□□ 0.94
ABCC3-201ENST00000285238 SUPT5HO00267 1087 aaKnown RBP20.94■□□□□ 0.94
ABCC3-201ENST00000285238 SHROOM4Q9ULL8 1493 aa20.57■□□□□ 0.88
ABCC3-201ENST00000285238 EHMT2Q96KQ7 1210 aa20.27■□□□□ 0.83
ABCC3-201ENST00000285238 APLP2Q06481 763 aa19.76■□□□□ 0.75
ABCC3-201ENST00000285238 FAM9AQ8IZU1 332 aaPredicted RBP19.76■□□□□ 0.75
ABCC3-201ENST00000285238 PELP1Q8IZL8 1130 aaKnown RBP19.65■□□□□ 0.74
ABCC3-201ENST00000285238 PCGF6Q9BYE7 350 aa19.62■□□□□ 0.73
ABCC3-201ENST00000285238 TTBK1Q5TCY1 1321 aaPredicted RBP19.59■□□□□ 0.73
ABCC3-201ENST00000285238 TRIM41Q8WV44 630 aa19.35■□□□□ 0.69
ABCC3-201ENST00000285238 RANGAP1P46060 587 aaPredicted RBP19.34■□□□□ 0.69
ABCC3-201ENST00000285238 CCER1Q8TC90 406 aaPredicted RBP19.21■□□□□ 0.67
ABCC3-201ENST00000285238 ZEB1P37275 1124 aaPredicted RBP19.19■□□□□ 0.66
ABCC3-201ENST00000285238 CENPBP07199 599 aaPredicted RBP19.13■□□□□ 0.65
ABCC3-201ENST00000285238 ATP1B4Q9UN42 357 aaPredicted RBP19.11■□□□□ 0.65
ABCC3-201ENST00000285238 UBTFP17480 764 aaKnown RBP19.11■□□□□ 0.65
ABCC3-201ENST00000285238 PPARGC1BQ86YN6 1023 aaKnown RBP18.91■□□□□ 0.62
ABCC3-201ENST00000285238 ERICH6Q7L0X2 663 aa18.87■□□□□ 0.61
ABCC3-201ENST00000285238 YTHDC1Q96MU7 727 aaKnown RBP18.82■□□□□ 0.6
ABCC3-201ENST00000285238 TRIM26Q12899 539 aaPredicted RBP18.74■□□□□ 0.59
ABCC3-201ENST00000285238 NEFLP07196 543 aa18.7■□□□□ 0.58
ABCC3-201ENST00000285238 LOC105371045A0A1W2PR82 267 aa18.64■□□□□ 0.57
ABCC3-201ENST00000285238 CHIC1Q5VXU3 224 aa18.6■□□□□ 0.57
ABCC3-201ENST00000285238 HRCP23327 699 aa18.59■□□□□ 0.57
ABCC3-201ENST00000285238 ITGAEP38570 1179 aa18.54■□□□□ 0.56
ABCC3-201ENST00000285238 HNRNPUL2Q1KMD3 747 aaKnown RBP18.44■□□□□ 0.54
ABCC3-201ENST00000285238 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.4■□□□□ 0.54
ABCC3-201ENST00000285238 POLR3GLQ9BT43 218 aa18.34■□□□□ 0.53
ABCC3-201ENST00000285238 MYT1LQ9UL68 1186 aa18.28■□□□□ 0.52
ABCC3-201ENST00000285238 MYT1Q01538 1121 aa18.24■□□□□ 0.51
ABCC3-201ENST00000285238 CNGB1Q14028 1251 aaPredicted RBP18.22■□□□□ 0.51
ABCC3-201ENST00000285238 DIEXFQ68CQ4 756 aaKnown RBP18.11■□□□□ 0.49
ABCC3-201ENST00000285238 DAXXQ9UER7 740 aaPredicted RBP18.09■□□□□ 0.49
ABCC3-201ENST00000285238 PABPN1Q86U42 306 aaKnown RBP eCLIP18.05■□□□□ 0.484e-8■■■■■ 30
ABCC3-201ENST00000285238 FAM50AQ14320 339 aaKnown RBP18.04■□□□□ 0.48
ABCC3-201ENST00000285238 ABCC9O60706 1549 aa18.02■□□□□ 0.48
ABCC3-201ENST00000285238 SLC4A1APQ9BWU0 796 aaKnown RBP17.93■□□□□ 0.46
ABCC3-201ENST00000285238 TRIM52Q96A61 297 aa17.92■□□□□ 0.46
ABCC3-201ENST00000285238 NEUROD1Q13562 356 aa17.91■□□□□ 0.46
ABCC3-201ENST00000285238 CLSPNQ9HAW4 1339 aa17.77■□□□□ 0.44
ABCC3-201ENST00000285238 GTF3C3Q9Y5Q9 886 aa17.74■□□□□ 0.43
ABCC3-201ENST00000285238 BCANQ96GW7 911 aa17.74■□□□□ 0.43
ABCC3-201ENST00000285238 ZNF326Q5BKZ1 582 aaKnown RBP17.73■□□□□ 0.43
ABCC3-201ENST00000285238 ANP32CO43423 234 aa17.71■□□□□ 0.42
ABCC3-201ENST00000285238 RTL5Q5HYW3 569 aaPredicted RBP17.7■□□□□ 0.42
ABCC3-201ENST00000285238 ZNF316A6NFI3 1004 aaPredicted RBP17.69■□□□□ 0.42
ABCC3-201ENST00000285238 CSRNP3Q8WYN3 585 aa17.67■□□□□ 0.42
ABCC3-201ENST00000285238 FBLN2P98095 1184 aa17.65■□□□□ 0.42
ABCC3-201ENST00000285238 P3H3Q8IVL6 736 aa17.64■□□□□ 0.41
ABCC3-201ENST00000285238 ARID3CA6NKF2 412 aa17.58■□□□□ 0.4
ABCC3-201ENST00000285238 CDK11AQ9UQ88 783 aaPredicted RBP17.52■□□□□ 0.4
ABCC3-201ENST00000285238 ACIN1Q9UKV3 1341 aaKnown RBP17.48■□□□□ 0.39
ABCC3-201ENST00000285238 ZNF777Q9ULD5 760 aaPredicted RBP17.43■□□□□ 0.38
ABCC3-201ENST00000285238 SCRIBQ14160 1630 aa17.38■□□□□ 0.37
ABCC3-201ENST00000285238 CANXP27824 592 aaKnown RBP17.37■□□□□ 0.37
ABCC3-201ENST00000285238 ZBTB47Q9UFB7 747 aaPredicted RBP17.37■□□□□ 0.37
ABCC3-201ENST00000285238 BCL11AQ9H165 835 aa17.33■□□□□ 0.37
ABCC3-201ENST00000285238 ZCCHC6Q5VYS8 1495 aaKnown RBP17.33■□□□□ 0.36
ABCC3-201ENST00000285238 DCAF1Q9Y4B6 1507 aa17.31■□□□□ 0.36
ABCC3-201ENST00000285238 TONSLQ96HA7 1378 aa17.29■□□□□ 0.36
ABCC3-201ENST00000285238 SLC24A1O60721 1099 aa17.28■□□□□ 0.36
ABCC3-201ENST00000285238 NEFMP07197 916 aa17.27■□□□□ 0.35
ABCC3-201ENST00000285238 CCDC180Q9P1Z9 1646 aa17.25■□□□□ 0.35
ABCC3-201ENST00000285238 DDX10Q13206 875 aaKnown RBP17.24■□□□□ 0.35
ABCC3-201ENST00000285238 FKBP8Q14318 412 aa17.23■□□□□ 0.35
ABCC3-201ENST00000285238 ANP32AP39687 249 aaKnown RBP17.22■□□□□ 0.35
ABCC3-201ENST00000285238 HNRNPUQ00839 825 aaKnown RBP eCLIP17.2■□□□□ 0.346e-7■■■□□ 18.3
ABCC3-201ENST00000285238 NPM2Q86SE8 214 aaKnown RBP17.19■□□□□ 0.34
ABCC3-201ENST00000285238 CHIC2Q9UKJ5 165 aa17.17■□□□□ 0.34
ABCC3-201ENST00000285238 FAM9BQ8IZU0 186 aa17.17■□□□□ 0.34
ABCC3-201ENST00000285238 CHGAP10645 457 aaKnown RBP17.14■□□□□ 0.34
ABCC3-201ENST00000285238 SALL2Q9Y467 1007 aaPredicted RBP17.1■□□□□ 0.33
ABCC3-201ENST00000285238 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.05■□□□□ 0.32
ABCC3-201ENST00000285238 ESF1Q9H501 851 aaKnown RBP17.04■□□□□ 0.32
ABCC3-201ENST00000285238 STAG3Q9UJ98 1225 aa17.04■□□□□ 0.32
ABCC3-201ENST00000285238 CLIP1P30622 1438 aa17.03■□□□□ 0.32
ABCC3-201ENST00000285238 TMC1Q8TDI8 760 aa17.03■□□□□ 0.32
ABCC3-201ENST00000285238 MTUS2Q5JR59 1369 aa17.03■□□□□ 0.32
ABCC3-201ENST00000285238 MIER1Q8N108 512 aa17.02■□□□□ 0.31
ABCC3-201ENST00000285238 HIRIP3Q9BW71 556 aaPredicted RBP17.01■□□□□ 0.31
ABCC3-201ENST00000285238 KDM2AQ9Y2K7 1162 aa17■□□□□ 0.31
ABCC3-201ENST00000285238 MRS2Q9HD23 443 aa16.99■□□□□ 0.31
ABCC3-201ENST00000285238 MYO15BQ96JP2 1530 aa16.98■□□□□ 0.31
ABCC3-201ENST00000285238 TSPY4P0CV99 314 aa16.98■□□□□ 0.31
ABCC3-201ENST00000285238 TSPY10P0CW01 314 aa16.98■□□□□ 0.31
ABCC3-201ENST00000285238 NPM1P06748 294 aaKnown RBP eCLIP16.98■□□□□ 0.31
ABCC3-201ENST00000285238 CCDC136Q96JN2 1154 aa16.97■□□□□ 0.31
ABCC3-201ENST00000285238 PLPPR3Q6T4P5 718 aa16.93■□□□□ 0.3
ABCC3-201ENST00000285238 HSP90AA1P07900 732 aaKnown RBP16.93■□□□□ 0.3
ABCC3-201ENST00000285238 UPF2Q9HAU5 1272 aaKnown RBP16.93■□□□□ 0.3
ABCC3-201ENST00000285238 RRP7BPQ9NSQ0 103 aa16.92■□□□□ 0.3
ABCC3-201ENST00000285238 SCAF1Q9H7N4 1312 aaKnown RBP16.92■□□□□ 0.3
ABCC3-201ENST00000285238 RSF1Q96T23 1441 aaPredicted RBP16.91■□□□□ 0.3
ABCC3-201ENST00000285238 WDR43Q15061 677 aaKnown RBP eCLIP16.91■□□□□ 0.3
ABCC3-201ENST00000285238 IRX6P78412 446 aaPredicted RBP16.9■□□□□ 0.3
ABCC3-201ENST00000285238 CEP162Q5TB80 1403 aa16.9■□□□□ 0.3
ABCC3-201ENST00000285238 CHMP7Q8WUX9 453 aaPredicted RBP16.89■□□□□ 0.3
ABCC3-201ENST00000285238 EIF4G2P78344 907 aaKnown RBP eCLIP16.88■□□□□ 0.29
ABCC3-201ENST00000285238 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms